RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 KRTAP13-1Q8IUC0 172 aa12.19□□□□□ -0.46
SHKBP1-222ENST00000600320 TRAV13-2A0A0B4J235 113 aa12.18□□□□□ -0.46
SHKBP1-222ENST00000600320 TSTD3H0UI37 97 aa12.17□□□□□ -0.46
SHKBP1-222ENST00000600320 ZNF861PO60384 105 aa12.17□□□□□ -0.46
SHKBP1-222ENST00000600320 CFC1BP0CG36 223 aa12.17□□□□□ -0.46
SHKBP1-222ENST00000600320 CFC1P0CG37 223 aa12.17□□□□□ -0.46
SHKBP1-222ENST00000600320 INAFM2P0DMQ5 153 aa12.17□□□□□ -0.46
SHKBP1-222ENST00000600320 UBE2AP49459 152 aa12.17□□□□□ -0.46
SHKBP1-222ENST00000600320 PKHD1L1Q86WI1 4243 aa12.16□□□□□ -0.46
SHKBP1-222ENST00000600320 ZNF73O43830 326 aaPredicted RBP12.15□□□□□ -0.46
SHKBP1-222ENST00000600320 SPINK6Q6UWN8 80 aa12.15□□□□□ -0.46
SHKBP1-222ENST00000600320 ETDCA0A1B0GVM5 59 aa12.14□□□□□ -0.47
SHKBP1-222ENST00000600320 RPL13AP40429 203 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-222ENST00000600320 RPL28P46779 137 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-222ENST00000600320 CTAG1AP78358 180 aa12.14□□□□□ -0.47
SHKBP1-222ENST00000600320 A0A0B4J2C4 111 aa12.13□□□□□ -0.47
SHKBP1-222ENST00000600320 B5MCH6 92 aa12.13□□□□□ -0.47
SHKBP1-222ENST00000600320 CBY1Q9Y3M2 126 aa12.13□□□□□ -0.47
SHKBP1-222ENST00000600320 TMEM238LA0A1B0GVL6 79 aa12.12□□□□□ -0.47
SHKBP1-222ENST00000600320 A6NJY4 79 aa12.12□□□□□ -0.47
SHKBP1-222ENST00000600320 C6orf99Q4VX62 202 aa12.12□□□□□ -0.47
SHKBP1-222ENST00000600320 SMIM11BQ8TCY0 68 aa12.12□□□□□ -0.47
SHKBP1-222ENST00000600320 DIRC1Q969H9 104 aa12.12□□□□□ -0.47
SHKBP1-222ENST00000600320 BVES-AS1Q5T3Y7 98 aa12.11□□□□□ -0.47
SHKBP1-222ENST00000600320 RAB37Q96AX2 223 aa12.11□□□□□ -0.47
SHKBP1-222ENST00000600320 H0Y9J4 135 aa12.09□□□□□ -0.47
SHKBP1-222ENST00000600320 NHP2Q9NX24 153 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-222ENST00000600320 SRRM2Q9UQ35 2752 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-222ENST00000600320 K7ERJ3 54 aa12.08□□□□□ -0.48
SHKBP1-222ENST00000600320 HINT1P49773 126 aaPredicted RBP12.08□□□□□ -0.48
SHKBP1-222ENST00000600320 Q6ZRX8 168 aa12.08□□□□□ -0.48
SHKBP1-222ENST00000600320 H7C2G1 150 aa12.07□□□□□ -0.48
SHKBP1-222ENST00000600320 SMCR5Q8TEV8 140 aa12.07□□□□□ -0.48
SHKBP1-222ENST00000600320 Q9BRP9 147 aa12.07□□□□□ -0.48
SHKBP1-222ENST00000600320 HIGD2AQ9BW72 106 aa12.07□□□□□ -0.48
SHKBP1-222ENST00000600320 FLG2Q5D862 2391 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-222ENST00000600320 A0A1B0GWB2 263 aa12.06□□□□□ -0.48
SHKBP1-222ENST00000600320 PRO1854Q9UHT4 67 aa12.06□□□□□ -0.48
SHKBP1-222ENST00000600320 COX7BP24311 80 aa12.05□□□□□ -0.48
SHKBP1-222ENST00000600320 ERC2-IT1O76042 136 aa12.04□□□□□ -0.48
SHKBP1-222ENST00000600320 ELOF1P60002 83 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-222ENST00000600320 M0R143 59 aa12.03□□□□□ -0.48
SHKBP1-222ENST00000600320 TRBV7-6A0A0J9YX20 115 aa12.01□□□□□ -0.49
SHKBP1-222ENST00000600320 KRTAP1-4P0C5Y4 121 aa12.01□□□□□ -0.49
SHKBP1-222ENST00000600320 Q1RN00 199 aa11.99□□□□□ -0.49
SHKBP1-222ENST00000600320 FAT3Q8TDW7 4589 aa11.96□□□□□ -0.49
SHKBP1-222ENST00000600320 TSPAN13O95857 204 aa11.96□□□□□ -0.49
SHKBP1-222ENST00000600320 SPRR4Q96PI1 79 aa11.96□□□□□ -0.49
SHKBP1-222ENST00000600320 ANAPC11Q9NYG5 84 aa11.96□□□□□ -0.49
SHKBP1-222ENST00000600320 LRP1Q07954 4544 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-222ENST00000600320 DHRS4-AS1Q9P1J3 65 aa11.95□□□□□ -0.5
SHKBP1-222ENST00000600320 VAMP3Q15836 100 aa11.94□□□□□ -0.5
SHKBP1-222ENST00000600320 BATFQ16520 125 aa11.94□□□□□ -0.5
SHKBP1-222ENST00000600320 ST20-AS1Q8NBB2 130 aa11.94□□□□□ -0.5
SHKBP1-222ENST00000600320 LINC01600Q96MT4 127 aa11.93□□□□□ -0.5
SHKBP1-222ENST00000600320 KRTAP29-1A8MX34 341 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-222ENST00000600320 TRIAP1O43715 76 aa11.92□□□□□ -0.5
SHKBP1-222ENST00000600320 LINC00575Q6W349 94 aa11.92□□□□□ -0.5
SHKBP1-222ENST00000600320 HERC1Q15751 4861 aa11.92□□□□□ -0.5
SHKBP1-222ENST00000600320 DMBT1Q9UGM3 2413 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-222ENST00000600320 OXTP01178 125 aa11.91□□□□□ -0.5
SHKBP1-222ENST00000600320 MYCBP2O75592 4640 aa11.9□□□□□ -0.5
SHKBP1-222ENST00000600320 PRR26Q8N8Z3 221 aa11.9□□□□□ -0.5
SHKBP1-222ENST00000600320 ZNF706Q9Y5V0 76 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-222ENST00000600320 MT1HL1P0DM35 61 aa11.89□□□□□ -0.51
SHKBP1-222ENST00000600320 GAGE2AQ6NT46 116 aa11.89□□□□□ -0.51
SHKBP1-222ENST00000600320 A0A087X002 238 aa11.88□□□□□ -0.51
SHKBP1-222ENST00000600320 PCP4L1A6NKN8 68 aa11.88□□□□□ -0.51
SHKBP1-222ENST00000600320 PSMB2P49721 201 aa11.88□□□□□ -0.51
SHKBP1-222ENST00000600320 FAM218AQ96MZ4 157 aa11.88□□□□□ -0.51
SHKBP1-222ENST00000600320 SNHG12Q9BXW3 62 aa11.87□□□□□ -0.51
SHKBP1-222ENST00000600320 H0YGX0 51 aa11.86□□□□□ -0.51
SHKBP1-222ENST00000600320 LINC00483Q53H64 154 aa11.86□□□□□ -0.51
SHKBP1-222ENST00000600320 hADV29S1A0JD25 119 aa11.85□□□□□ -0.51
SHKBP1-222ENST00000600320 SLC25A20O43772 301 aa11.85□□□□□ -0.51
SHKBP1-222ENST00000600320 KRTAP10-8P60410 259 aa11.85□□□□□ -0.51
SHKBP1-222ENST00000600320 FAM229BQ4G0N7 80 aa11.85□□□□□ -0.51
SHKBP1-222ENST00000600320 NAA38Q9BRA0 125 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-222ENST00000600320 LINC01547P58512 204 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-222ENST00000600320 CLEC2BQ92478 149 aa11.84□□□□□ -0.51
SHKBP1-222ENST00000600320 CRYGAP11844 174 aa11.83□□□□□ -0.52
SHKBP1-222ENST00000600320 KRTAP13-2Q52LG2 175 aa11.83□□□□□ -0.52
SHKBP1-222ENST00000600320 SPRR1BP22528 89 aa11.82□□□□□ -0.52
SHKBP1-222ENST00000600320 DEFB105AQ8NG35 78 aa11.82□□□□□ -0.52
SHKBP1-222ENST00000600320 C3orf22Q8N5N4 141 aa11.81□□□□□ -0.52
SHKBP1-222ENST00000600320 IGLV5-48A0A075B6I7 105 aa11.8□□□□□ -0.52
SHKBP1-222ENST00000600320 J3QL48 77 aa11.8□□□□□ -0.52
SHKBP1-222ENST00000600320 Q6ZQY7 126 aa11.8□□□□□ -0.52
SHKBP1-222ENST00000600320 COX6CP09669 75 aa11.79□□□□□ -0.52
SHKBP1-222ENST00000600320 TAX1BP3O14907 124 aa11.78□□□□□ -0.52
SHKBP1-222ENST00000600320 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-222ENST00000600320 Q8N377 158 aa11.78□□□□□ -0.52
SHKBP1-222ENST00000600320 TNXBP22105 4242 aa11.77□□□□□ -0.52
SHKBP1-222ENST00000600320 TEX49A0A1B0GTD5 131 aa11.77□□□□□ -0.53
SHKBP1-222ENST00000600320 SCGB1C2P0DMR2 95 aa11.77□□□□□ -0.53
SHKBP1-222ENST00000600320 A0A1B0GX51 115 aa11.76□□□□□ -0.53
SHKBP1-222ENST00000600320 SMIM29Q86T20 159 aa11.75□□□□□ -0.53
SHKBP1-222ENST00000600320 TYMSOSQ8TAI1 123 aa11.75□□□□□ -0.53
SHKBP1-222ENST00000600320 C9orf118A6NHY6 69 aa11.74□□□□□ -0.53
SHKBP1-222ENST00000600320 H3BUT2 72 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms