RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 C2orf91Q6ZV80 131 aa8.24□□□□□ -1.09
VRK3-219ENST00000600137 FAM19A1Q7Z5A9 133 aa8.24□□□□□ -1.09
VRK3-219ENST00000600137 LINC00518Q8N0U6 118 aa8.23□□□□□ -1.09
VRK3-219ENST00000600137 UBE2AP49459 152 aa8.22□□□□□ -1.09
VRK3-219ENST00000600137 S100A7L2Q5SY68 101 aa8.22□□□□□ -1.09
VRK3-219ENST00000600137 HIGD1BQ9P298 99 aa8.22□□□□□ -1.09
VRK3-219ENST00000600137 B5MCH6 92 aa8.21□□□□□ -1.1
VRK3-219ENST00000600137 SLC25A34Q6PIV7 304 aa8.21□□□□□ -1.1
VRK3-219ENST00000600137 TRAV23DV6A0A075B6W5 121 aa8.2□□□□□ -1.1
VRK3-219ENST00000600137 COPS9Q8WXC6 57 aa8.2□□□□□ -1.1
VRK3-219ENST00000600137 A4D1N5 150 aa8.19□□□□□ -1.1
VRK3-219ENST00000600137 J3QL48 77 aa8.19□□□□□ -1.1
VRK3-219ENST00000600137 SMCR5Q8TEV8 140 aa8.19□□□□□ -1.1
VRK3-219ENST00000600137 ZNF73O43830 326 aaPredicted RBP8.18□□□□□ -1.1
VRK3-219ENST00000600137 PRR26Q8N8Z3 221 aa8.18□□□□□ -1.1
VRK3-219ENST00000600137 OR13C6PQ8NH95 151 aa8.18□□□□□ -1.1
VRK3-219ENST00000600137 Q9BRP9 147 aa8.18□□□□□ -1.1
VRK3-219ENST00000600137 LOC105371267A0A1B0GV96 52 aa8.17□□□□□ -1.1
VRK3-219ENST00000600137 ETDCA0A1B0GVM5 59 aa8.17□□□□□ -1.1
VRK3-219ENST00000600137 ERC2-IT1O76042 136 aa8.17□□□□□ -1.1
VRK3-219ENST00000600137 HIST1H4GQ99525 98 aa8.17□□□□□ -1.1
VRK3-219ENST00000600137 ANAPC11Q9NYG5 84 aa8.17□□□□□ -1.1
VRK3-219ENST00000600137 Q6ZRX8 168 aa8.16□□□□□ -1.1
VRK3-219ENST00000600137 HIGD2AQ9BW72 106 aa8.16□□□□□ -1.1
VRK3-219ENST00000600137 A0A087X002 238 aa8.15□□□□□ -1.1
VRK3-219ENST00000600137 S100A12P80511 92 aa8.15□□□□□ -1.1
VRK3-219ENST00000600137 TRAV13-2A0A0B4J235 113 aa8.14□□□□□ -1.11
VRK3-219ENST00000600137 A6NDN8 102 aa8.13□□□□□ -1.11
VRK3-219ENST00000600137 C6orf99Q4VX62 202 aa8.13□□□□□ -1.11
VRK3-219ENST00000600137 KRTAP13-2Q52LG2 175 aa8.13□□□□□ -1.11
VRK3-219ENST00000600137 SPRR4Q96PI1 79 aa8.13□□□□□ -1.11
VRK3-219ENST00000600137 CBY1Q9Y3M2 126 aa8.13□□□□□ -1.11
VRK3-219ENST00000600137 TAL2Q16559 108 aa8.12□□□□□ -1.11
VRK3-219ENST00000600137 SMIM11BQ8TCY0 68 aa8.12□□□□□ -1.11
VRK3-219ENST00000600137 CFC1BP0CG36 223 aa8.11□□□□□ -1.11
VRK3-219ENST00000600137 CFC1P0CG37 223 aa8.11□□□□□ -1.11
VRK3-219ENST00000600137 ELOF1P60002 83 aaKnown RBP8.11□□□□□ -1.11
VRK3-219ENST00000600137 FAM229BQ4G0N7 80 aa8.11□□□□□ -1.11
VRK3-219ENST00000600137 HMCN2Q8NDA2 5059 aa8.1□□□□□ -1.11
VRK3-219ENST00000600137 TRBV7-6A0A0J9YX20 115 aa8.1□□□□□ -1.11
VRK3-219ENST00000600137 CEND1Q8N111 149 aa8.1□□□□□ -1.11
VRK3-219ENST00000600137 C12orf57Q99622 126 aa8.1□□□□□ -1.11
VRK3-219ENST00000600137 SMIM6P0DI80 62 aa8.09□□□□□ -1.11
VRK3-219ENST00000600137 FXYD2P54710 66 aa8.09□□□□□ -1.11
VRK3-219ENST00000600137 UQCR10Q9UDW1 63 aa8.09□□□□□ -1.11
VRK3-219ENST00000600137 CRYGAP11844 174 aa8.08□□□□□ -1.12
VRK3-219ENST00000600137 COX7BP24311 80 aa8.08□□□□□ -1.12
VRK3-219ENST00000600137 LINC00483Q53H64 154 aa8.08□□□□□ -1.12
VRK3-219ENST00000600137 HINT1P49773 126 aaPredicted RBP8.07□□□□□ -1.12
VRK3-219ENST00000600137 ST20-AS1Q8NBB2 130 aa8.07□□□□□ -1.12
VRK3-219ENST00000600137 RPL13AP40429 203 aaKnown RBP8.06□□□□□ -1.12
VRK3-219ENST00000600137 PRO1933Q9H354 126 aa8.06□□□□□ -1.12
VRK3-219ENST00000600137 A0A0B4J2C4 111 aa8.05□□□□□ -1.12
VRK3-219ENST00000600137 A0A1B0GWB2 263 aa8.05□□□□□ -1.12
VRK3-219ENST00000600137 HSD52Q0P140 79 aa8.05□□□□□ -1.12
VRK3-219ENST00000600137 C3orf22Q8N5N4 141 aa8.05□□□□□ -1.12
VRK3-219ENST00000600137 DHRS4-AS1Q9P1J3 65 aa8.05□□□□□ -1.12
VRK3-219ENST00000600137 ZNF706Q9Y5V0 76 aaPredicted RBP8.05□□□□□ -1.12
VRK3-219ENST00000600137 GAGE2AQ6NT46 116 aa8.04□□□□□ -1.12
VRK3-219ENST00000600137 TYMSOSQ8TAI1 123 aa8.03□□□□□ -1.12
VRK3-219ENST00000600137 SPRR1BP22528 89 aa8.02□□□□□ -1.13
VRK3-219ENST00000600137 LINC01547P58512 204 aaPredicted RBP8.02□□□□□ -1.13
VRK3-219ENST00000600137 LINC00575Q6W349 94 aa8□□□□□ -1.13
VRK3-219ENST00000600137 RAB37Q96AX2 223 aa8□□□□□ -1.13
VRK3-219ENST00000600137 PRO1854Q9UHT4 67 aa8□□□□□ -1.13
VRK3-219ENST00000600137 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
VRK3-219ENST00000600137 A6NJY4 79 aa7.99□□□□□ -1.13
VRK3-219ENST00000600137 BVES-AS1Q5T3Y7 98 aa7.99□□□□□ -1.13
VRK3-219ENST00000600137 IGLV5-48A0A075B6I7 105 aa7.98□□□□□ -1.13
VRK3-219ENST00000600137 H7C2G1 150 aa7.98□□□□□ -1.13
VRK3-219ENST00000600137 NHP2Q9NX24 153 aaKnown RBP7.98□□□□□ -1.13
VRK3-219ENST00000600137 VAMP3Q15836 100 aa7.97□□□□□ -1.13
VRK3-219ENST00000600137 SMIM29Q86T20 159 aa7.97□□□□□ -1.13
VRK3-219ENST00000600137 K7ERJ3 54 aa7.96□□□□□ -1.14
VRK3-219ENST00000600137 CTAG1AP78358 180 aa7.96□□□□□ -1.14
VRK3-219ENST00000600137 Q8N377 158 aa7.95□□□□□ -1.14
VRK3-219ENST00000600137 LINC00304Q8N9R0 145 aa7.94□□□□□ -1.14
VRK3-219ENST00000600137 FAM218AQ96MZ4 157 aa7.94□□□□□ -1.14
VRK3-219ENST00000600137 IGLV9-49A0A0B4J1Y8 123 aa7.93□□□□□ -1.14
VRK3-219ENST00000600137 TEX49A0A1B0GTD5 131 aa7.93□□□□□ -1.14
VRK3-219ENST00000600137 hADV29S1A0JD25 119 aa7.93□□□□□ -1.14
VRK3-219ENST00000600137 SSBP3-AS1Q7Z2R9 100 aa7.93□□□□□ -1.14
VRK3-219ENST00000600137 Q8NBF4 154 aa7.93□□□□□ -1.14
VRK3-219ENST00000600137 DEFB105AQ8NG35 78 aa7.93□□□□□ -1.14
VRK3-219ENST00000600137 TRIAP1O43715 76 aa7.92□□□□□ -1.14
VRK3-219ENST00000600137 TSPAN13O95857 204 aa7.92□□□□□ -1.14
VRK3-219ENST00000600137 MOBPQ13875 183 aa7.92□□□□□ -1.14
VRK3-219ENST00000600137 LRP2P98164 4655 aa7.92□□□□□ -1.14
VRK3-219ENST00000600137 H0YGX0 51 aa7.91□□□□□ -1.14
VRK3-219ENST00000600137 SLC25A20O43772 301 aa7.91□□□□□ -1.14
VRK3-219ENST00000600137 Q6ZQY7 126 aa7.91□□□□□ -1.14
VRK3-219ENST00000600137 TSTD3H0UI37 97 aa7.9□□□□□ -1.14
VRK3-219ENST00000600137 Q1RN00 199 aa7.9□□□□□ -1.14
VRK3-219ENST00000600137 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.89□□□□□ -1.15
VRK3-219ENST00000600137 LAMTOR3Q9UHA4 124 aa7.89□□□□□ -1.15
VRK3-219ENST00000600137 LPAP08519 4548 aa7.89□□□□□ -1.15
VRK3-219ENST00000600137 SPAG11AQ6PDA7 123 aa7.88□□□□□ -1.15
VRK3-219ENST00000600137 A0A1B0GX51 115 aa7.86□□□□□ -1.15
VRK3-219ENST00000600137 M0R143 59 aa7.86□□□□□ -1.15
VRK3-219ENST00000600137 C9orf153Q5TBE3 101 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms