RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 SPANXCQ9NY87 97 aa13.35□□□□□ -0.27
CCDC61-207ENST00000599044 DLEU1O43261 78 aa13.33□□□□□ -0.28
CCDC61-207ENST00000599044 FAM229BQ4G0N7 80 aa13.33□□□□□ -0.28
CCDC61-207ENST00000599044 MIEN1Q9BRT3 115 aa13.33□□□□□ -0.28
CCDC61-207ENST00000599044 NCR3O14931 201 aa13.31□□□□□ -0.28
CCDC61-207ENST00000599044 RETNLBQ9BQ08 111 aa13.3□□□□□ -0.28
CCDC61-207ENST00000599044 SLC25A34Q6PIV7 304 aa13.29□□□□□ -0.28
CCDC61-207ENST00000599044 SPANXB1Q9NS25 103 aaPredicted RBP13.29□□□□□ -0.28
CCDC61-207ENST00000599044 NDUFC2O95298 119 aa13.27□□□□□ -0.29
CCDC61-207ENST00000599044 S100A12P80511 92 aa13.27□□□□□ -0.29
CCDC61-207ENST00000599044 Q6ZVH6 145 aa13.27□□□□□ -0.29
CCDC61-207ENST00000599044 MUSTN1Q8IVN3 82 aa13.27□□□□□ -0.29
CCDC61-207ENST00000599044 LINC00304Q8N9R0 145 aa13.27□□□□□ -0.29
CCDC61-207ENST00000599044 SMIM6P0DI80 62 aa13.26□□□□□ -0.29
CCDC61-207ENST00000599044 IFITM1P13164 125 aa13.26□□□□□ -0.29
CCDC61-207ENST00000599044 C2orf91Q6ZV80 131 aa13.26□□□□□ -0.29
CCDC61-207ENST00000599044 C3orf22Q8N5N4 141 aa13.25□□□□□ -0.29
CCDC61-207ENST00000599044 HIGD2AQ9BW72 106 aa13.24□□□□□ -0.29
CCDC61-207ENST00000599044 TRBV10-2A0A0K0K1G8 114 aa13.22□□□□□ -0.29
CCDC61-207ENST00000599044 PPDPFQ9H3Y8 114 aa13.22□□□□□ -0.29
CCDC61-207ENST00000599044 HIGD1BQ9P298 99 aa13.22□□□□□ -0.29
CCDC61-207ENST00000599044 TRBV10-3A0A0K0K1G6 114 aa13.21□□□□□ -0.29
CCDC61-207ENST00000599044 COPS9Q8WXC6 57 aa13.2□□□□□ -0.3
CCDC61-207ENST00000599044 HIST1H4GQ99525 98 aa13.2□□□□□ -0.3
CCDC61-207ENST00000599044 SPRR4Q96PI1 79 aa13.18□□□□□ -0.3
CCDC61-207ENST00000599044 DDTP30046 118 aa13.17□□□□□ -0.3
CCDC61-207ENST00000599044 PRO1933Q9H354 126 aa13.17□□□□□ -0.3
CCDC61-207ENST00000599044 IGLV6-57P01721 117 aa13.16□□□□□ -0.3
CCDC61-207ENST00000599044 LINC00337Q8N6G1 96 aa13.16□□□□□ -0.3
CCDC61-207ENST00000599044 UQCR10Q9UDW1 63 aa13.16□□□□□ -0.3
CCDC61-207ENST00000599044 A0A0U1RQV1 116 aa13.15□□□□□ -0.3
CCDC61-207ENST00000599044 S100A7L2Q5SY68 101 aa13.15□□□□□ -0.3
CCDC61-207ENST00000599044 A4D1N5 150 aa13.14□□□□□ -0.31
CCDC61-207ENST00000599044 SPRR1AP35321 89 aa13.14□□□□□ -0.31
CCDC61-207ENST00000599044 LINC00518Q8N0U6 118 aa13.14□□□□□ -0.31
CCDC61-207ENST00000599044 KCNQ1DNQ9H478 68 aa13.14□□□□□ -0.31
CCDC61-207ENST00000599044 MUC17Q685J3 4493 aa13.13□□□□□ -0.31
CCDC61-207ENST00000599044 KRTAP4-16G5E9R7 235 aaPredicted RBP13.13□□□□□ -0.31
CCDC61-207ENST00000599044 PRYO14603 147 aa13.13□□□□□ -0.31
CCDC61-207ENST00000599044 OR13C6PQ8NH95 151 aa13.13□□□□□ -0.31
CCDC61-207ENST00000599044 C12orf57Q99622 126 aa13.13□□□□□ -0.31
CCDC61-207ENST00000599044 FAT4Q6V0I7 4981 aa13.12□□□□□ -0.31
CCDC61-207ENST00000599044 IGLV7-46A0A075B6I9 117 aa13.11□□□□□ -0.31
CCDC61-207ENST00000599044 SMCR5Q8TEV8 140 aa13.11□□□□□ -0.31
CCDC61-207ENST00000599044 TAL2Q16559 108 aa13.1□□□□□ -0.31
CCDC61-207ENST00000599044 CTAG1AP78358 180 aa13.08□□□□□ -0.32
CCDC61-207ENST00000599044 TPRXLQ17RH7 258 aa13.08□□□□□ -0.32
CCDC61-207ENST00000599044 CEND1Q8N111 149 aa13.08□□□□□ -0.32
CCDC61-207ENST00000599044 TRAV23DV6A0A075B6W5 121 aa13.07□□□□□ -0.32
CCDC61-207ENST00000599044 ETDCA0A1B0GVM5 59 aa13.06□□□□□ -0.32
CCDC61-207ENST00000599044 A6NDN8 102 aa13.06□□□□□ -0.32
CCDC61-207ENST00000599044 CDIP1Q9H305 208 aa13.06□□□□□ -0.32
CCDC61-207ENST00000599044 ZNF706Q9Y5V0 76 aaPredicted RBP13.06□□□□□ -0.32
CCDC61-207ENST00000599044 HSD52Q0P140 79 aa13.05□□□□□ -0.32
CCDC61-207ENST00000599044 TRAV13-2A0A0B4J235 113 aa13.04□□□□□ -0.32
CCDC61-207ENST00000599044 FXYD2P54710 66 aa13.04□□□□□ -0.32
CCDC61-207ENST00000599044 SPAG11AQ6PDA7 123 aa13.04□□□□□ -0.32
CCDC61-207ENST00000599044 Q8NBF4 154 aa13.04□□□□□ -0.32
CCDC61-207ENST00000599044 B5MCH6 92 aa13.03□□□□□ -0.32
CCDC61-207ENST00000599044 ERC2-IT1O76042 136 aa13.03□□□□□ -0.32
CCDC61-207ENST00000599044 LCE2AQ5TA79 106 aaPredicted RBP13.03□□□□□ -0.32
CCDC61-207ENST00000599044 ZNF73O43830 326 aaPredicted RBP13.02□□□□□ -0.33
CCDC61-207ENST00000599044 CFC1BP0CG36 223 aa13.02□□□□□ -0.33
CCDC61-207ENST00000599044 CFC1P0CG37 223 aa13.02□□□□□ -0.33
CCDC61-207ENST00000599044 KRTAP9-2Q9BYQ4 174 aa13.02□□□□□ -0.33
CCDC61-207ENST00000599044 LINC00483Q53H64 154 aa13.01□□□□□ -0.33
CCDC61-207ENST00000599044 CBY1Q9Y3M2 126 aa13□□□□□ -0.33
CCDC61-207ENST00000599044 GAGE2AQ6NT46 116 aa12.99□□□□□ -0.33
CCDC61-207ENST00000599044 Q9BRP9 147 aa12.99□□□□□ -0.33
CCDC61-207ENST00000599044 C4orf48Q5BLP8 95 aa12.98□□□□□ -0.33
CCDC61-207ENST00000599044 TSTD3H0UI37 97 aa12.97□□□□□ -0.33
CCDC61-207ENST00000599044 C6orf99Q4VX62 202 aa12.97□□□□□ -0.33
CCDC61-207ENST00000599044 SMIM11BQ8TCY0 68 aa12.97□□□□□ -0.33
CCDC61-207ENST00000599044 A0A0B4J2C4 111 aa12.96□□□□□ -0.33
CCDC61-207ENST00000599044 TMEM238LA0A1B0GVL6 79 aa12.95□□□□□ -0.34
CCDC61-207ENST00000599044 A6NJY4 79 aa12.95□□□□□ -0.34
CCDC61-207ENST00000599044 Q6ZRX8 168 aa12.95□□□□□ -0.34
CCDC61-207ENST00000599044 RAB37Q96AX2 223 aa12.95□□□□□ -0.34
CCDC61-207ENST00000599044 BVES-AS1Q5T3Y7 98 aa12.93□□□□□ -0.34
CCDC61-207ENST00000599044 IGLV9-49A0A0B4J1Y8 123 aa12.92□□□□□ -0.34
CCDC61-207ENST00000599044 MOBPQ13875 183 aa12.92□□□□□ -0.34
CCDC61-207ENST00000599044 FP248Q71RG6 208 aaPredicted RBP12.92□□□□□ -0.34
CCDC61-207ENST00000599044 NHP2Q9NX24 153 aaKnown RBP12.92□□□□□ -0.34
CCDC61-207ENST00000599044 H7C2G1 150 aa12.91□□□□□ -0.34
CCDC61-207ENST00000599044 COX7BP24311 80 aa12.91□□□□□ -0.34
CCDC61-207ENST00000599044 HINT1P49773 126 aaPredicted RBP12.91□□□□□ -0.34
CCDC61-207ENST00000599044 KRTAP13-3Q3SY46 172 aa12.91□□□□□ -0.34
CCDC61-207ENST00000599044 SPINK1P00995 79 aa12.9□□□□□ -0.34
CCDC61-207ENST00000599044 ELOF1P60002 83 aaKnown RBP12.9□□□□□ -0.34
CCDC61-207ENST00000599044 K7ERJ3 54 aa12.89□□□□□ -0.35
CCDC61-207ENST00000599044 PRO1854Q9UHT4 67 aa12.89□□□□□ -0.35
CCDC61-207ENST00000599044 TRBV7-6A0A0J9YX20 115 aa12.87□□□□□ -0.35
CCDC61-207ENST00000599044 A0A1B0GWB2 263 aa12.87□□□□□ -0.35
CCDC61-207ENST00000599044 SSBP3-AS1Q7Z2R9 100 aa12.85□□□□□ -0.35
CCDC61-207ENST00000599044 Q8N377 158 aa12.84□□□□□ -0.35
CCDC61-207ENST00000599044 ST20-AS1Q8NBB2 130 aa12.84□□□□□ -0.35
CCDC61-207ENST00000599044 M0R143 59 aa12.83□□□□□ -0.36
CCDC61-207ENST00000599044 Q1RN00 199 aa12.81□□□□□ -0.36
CCDC61-207ENST00000599044 DHRS4-AS1Q9P1J3 65 aa12.81□□□□□ -0.36
CCDC61-207ENST00000599044 VAMP3Q15836 100 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms