RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 Q8NBF4 154 aa8.63□□□□□ -1.03
LIG1-215ENST00000597901 Q9BRP9 147 aa8.63□□□□□ -1.03
LIG1-215ENST00000597901 Q6ZRX8 168 aa8.62□□□□□ -1.03
LIG1-215ENST00000597901 LITAFQ99732 161 aa8.61□□□□□ -1.03
LIG1-215ENST00000597901 TRAV23DV6A0A075B6W5 121 aa8.6□□□□□ -1.03
LIG1-215ENST00000597901 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
LIG1-215ENST00000597901 COA6Q5JTJ3 125 aaKnown RBP8.6□□□□□ -1.03
LIG1-215ENST00000597901 LINC00308Q8TCZ7 52 aa8.6□□□□□ -1.03
LIG1-215ENST00000597901 ZNF73O43830 326 aaPredicted RBP8.59□□□□□ -1.03
LIG1-215ENST00000597901 TIMM17BO60830 172 aa8.59□□□□□ -1.03
LIG1-215ENST00000597901 TPRXLQ17RH7 258 aa8.59□□□□□ -1.03
LIG1-215ENST00000597901 SSBP3-AS1Q7Z2R9 100 aa8.59□□□□□ -1.03
LIG1-215ENST00000597901 CDIP1Q9H305 208 aa8.59□□□□□ -1.03
LIG1-215ENST00000597901 SPINK1P00995 79 aa8.58□□□□□ -1.04
LIG1-215ENST00000597901 JOSD1Q15040 202 aaPredicted RBP8.58□□□□□ -1.04
LIG1-215ENST00000597901 TTTY13Q9BZ97 58 aa8.58□□□□□ -1.04
LIG1-215ENST00000597901 IGLV9-49A0A0B4J1Y8 123 aa8.57□□□□□ -1.04
LIG1-215ENST00000597901 ZNF815PA8K554 130 aa8.57□□□□□ -1.04
LIG1-215ENST00000597901 KRTDAPP60985 99 aa8.57□□□□□ -1.04
LIG1-215ENST00000597901 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
LIG1-215ENST00000597901 MUC2Q02817 5179 aa8.57□□□□□ -1.04
LIG1-215ENST00000597901 OR13C6PQ8NH95 151 aa8.56□□□□□ -1.04
LIG1-215ENST00000597901 CBY1Q9Y3M2 126 aa8.56□□□□□ -1.04
LIG1-215ENST00000597901 HINT1P49773 126 aaPredicted RBP8.55□□□□□ -1.04
LIG1-215ENST00000597901 MOBPQ13875 183 aa8.55□□□□□ -1.04
LIG1-215ENST00000597901 FP248Q71RG6 208 aaPredicted RBP8.55□□□□□ -1.04
LIG1-215ENST00000597901 ST20-AS1Q8NBB2 130 aa8.54□□□□□ -1.04
LIG1-215ENST00000597901 C5orf52A6NGY3 159 aa8.53□□□□□ -1.04
LIG1-215ENST00000597901 LINC00518Q8N0U6 118 aa8.53□□□□□ -1.04
LIG1-215ENST00000597901 SPANXDQ9BXN6 97 aa8.51□□□□□ -1.05
LIG1-215ENST00000597901 C20orf202A1L168 122 aa8.5□□□□□ -1.05
LIG1-215ENST00000597901 ANKRD39Q53RE8 183 aa8.5□□□□□ -1.05
LIG1-215ENST00000597901 MUC17Q685J3 4493 aa8.5□□□□□ -1.05
LIG1-215ENST00000597901 RPS29P62273 56 aaKnown RBP8.49□□□□□ -1.05
LIG1-215ENST00000597901 SCGB1D4Q6XE38 83 aa8.49□□□□□ -1.05
LIG1-215ENST00000597901 DHRS4-AS1Q9P1J3 65 aa8.49□□□□□ -1.05
LIG1-215ENST00000597901 KRTAP13-3Q3SY46 172 aa8.48□□□□□ -1.05
LIG1-215ENST00000597901 C9orf153Q5TBE3 101 aa8.48□□□□□ -1.05
LIG1-215ENST00000597901 ATOH7Q8N100 152 aa8.48□□□□□ -1.05
LIG1-215ENST00000597901 Q8N377 158 aa8.48□□□□□ -1.05
LIG1-215ENST00000597901 SPRR1BP22528 89 aa8.47□□□□□ -1.05
LIG1-215ENST00000597901 SLC25A20O43772 301 aa8.46□□□□□ -1.06
LIG1-215ENST00000597901 COX7BP24311 80 aa8.46□□□□□ -1.06
LIG1-215ENST00000597901 C6orf99Q4VX62 202 aa8.46□□□□□ -1.06
LIG1-215ENST00000597901 IFITM1P13164 125 aa8.45□□□□□ -1.06
LIG1-215ENST00000597901 AKR1D1P51857 326 aa8.45□□□□□ -1.06
LIG1-215ENST00000597901 ELOF1P60002 83 aaKnown RBP8.45□□□□□ -1.06
LIG1-215ENST00000597901 PCP2Q8IVA1 136 aa8.45□□□□□ -1.06
LIG1-215ENST00000597901 MUSTN1Q8IVN3 82 aa8.45□□□□□ -1.06
LIG1-215ENST00000597901 Q6ZVH6 145 aa8.44□□□□□ -1.06
LIG1-215ENST00000597901 COPS9Q8WXC6 57 aa8.44□□□□□ -1.06
LIG1-215ENST00000597901 SLC25A34Q6PIV7 304 aa8.43□□□□□ -1.06
LIG1-215ENST00000597901 TRBV7-6A0A0J9YX20 115 aa8.42□□□□□ -1.06
LIG1-215ENST00000597901 A6NDN8 102 aa8.42□□□□□ -1.06
LIG1-215ENST00000597901 SNRPEP62304 92 aaKnown RBP8.42□□□□□ -1.06
LIG1-215ENST00000597901 TAL2Q16559 108 aa8.42□□□□□ -1.06
LIG1-215ENST00000597901 LAMTOR3Q9UHA4 124 aa8.42□□□□□ -1.06
LIG1-215ENST00000597901 DEFB105AQ8NG35 78 aa8.41□□□□□ -1.06
LIG1-215ENST00000597901 HIST3H2BBQ8N257 126 aa8.4□□□□□ -1.06
LIG1-215ENST00000597901 HIST1H2BLQ99880 126 aa8.39□□□□□ -1.07
LIG1-215ENST00000597901 TEX49A0A1B0GTD5 131 aa8.38□□□□□ -1.07
LIG1-215ENST00000597901 A0A1B0GWB2 263 aa8.38□□□□□ -1.07
LIG1-215ENST00000597901 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
LIG1-215ENST00000597901 HRCT1Q6UXD1 115 aa8.38□□□□□ -1.07
LIG1-215ENST00000597901 FAT4Q6V0I7 4981 aa8.38□□□□□ -1.07
LIG1-215ENST00000597901 S100A2P29034 98 aa8.37□□□□□ -1.07
LIG1-215ENST00000597901 LCE2AQ5TA79 106 aaPredicted RBP8.37□□□□□ -1.07
LIG1-215ENST00000597901 TRAV13-2A0A0B4J235 113 aa8.36□□□□□ -1.07
LIG1-215ENST00000597901 S100A1P23297 94 aa8.36□□□□□ -1.07
LIG1-215ENST00000597901 Q1RN00 199 aa8.36□□□□□ -1.07
LIG1-215ENST00000597901 SMIM29Q86T20 159 aa8.36□□□□□ -1.07
LIG1-215ENST00000597901 SMIM11BQ8TCY0 68 aa8.35□□□□□ -1.07
LIG1-215ENST00000597901 PRO1933Q9H354 126 aa8.35□□□□□ -1.07
LIG1-215ENST00000597901 A4D1N5 150 aa8.34□□□□□ -1.07
LIG1-215ENST00000597901 LINC01547P58512 204 aaPredicted RBP8.34□□□□□ -1.07
LIG1-215ENST00000597901 SEC61BP60468 96 aaKnown RBP8.34□□□□□ -1.07
LIG1-215ENST00000597901 KRTAP9-2Q9BYQ4 174 aa8.34□□□□□ -1.07
LIG1-215ENST00000597901 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
LIG1-215ENST00000597901 HSBP1L1C9JCN9 74 aa8.33□□□□□ -1.08
LIG1-215ENST00000597901 CD164Q04900 197 aa8.33□□□□□ -1.08
LIG1-215ENST00000597901 LIMD2Q9BT23 127 aa8.33□□□□□ -1.08
LIG1-215ENST00000597901 S100A6P06703 90 aa8.32□□□□□ -1.08
LIG1-215ENST00000597901 XP32Q5T750 250 aa8.32□□□□□ -1.08
LIG1-215ENST00000597901 KRTAP4-1Q9BYQ7 146 aa8.31□□□□□ -1.08
LIG1-215ENST00000597901 NHP2Q9NX24 153 aaKnown RBP8.3□□□□□ -1.08
LIG1-215ENST00000597901 H7C2G1 150 aa8.29□□□□□ -1.08
LIG1-215ENST00000597901 VAMP3Q15836 100 aa8.29□□□□□ -1.08
LIG1-215ENST00000597901 A0A0G2JQZ4 141 aa8.28□□□□□ -1.08
LIG1-215ENST00000597901 SCGB1D1O95968 90 aa8.27□□□□□ -1.09
LIG1-215ENST00000597901 Q5XG85 94 aa8.26□□□□□ -1.09
LIG1-215ENST00000597901 LINC00575Q6W349 94 aa8.26□□□□□ -1.09
LIG1-215ENST00000597901 C9orf92A6NGG3 77 aa8.23□□□□□ -1.09
LIG1-215ENST00000597901 hADV29S1A0JD25 119 aa8.22□□□□□ -1.09
LIG1-215ENST00000597901 C1orf195Q5TG92 126 aa8.22□□□□□ -1.09
LIG1-215ENST00000597901 HIST1H4GQ99525 98 aa8.22□□□□□ -1.09
LIG1-215ENST00000597901 COX8AP10176 69 aa8.21□□□□□ -1.1
LIG1-215ENST00000597901 Q6ZQY7 126 aa8.2□□□□□ -1.1
LIG1-215ENST00000597901 DLEU1O43261 78 aa8.19□□□□□ -1.1
LIG1-215ENST00000597901 C12orf57Q99622 126 aa8.19□□□□□ -1.1
LIG1-215ENST00000597901 F8WEM9 126 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms