RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 C9orf153Q5TBE3 101 aa5.87□□□□□ -1.47
SHKBP1-210ENST00000595874 MUC2Q02817 5179 aa5.86□□□□□ -1.47
SHKBP1-210ENST00000595874 TRBV10-2A0A0K0K1G8 114 aa5.86□□□□□ -1.47
SHKBP1-210ENST00000595874 ZNF815PA8K554 130 aa5.86□□□□□ -1.47
SHKBP1-210ENST00000595874 C3orf79P0CE67 100 aa5.86□□□□□ -1.47
SHKBP1-210ENST00000595874 ATOH7Q8N100 152 aa5.86□□□□□ -1.47
SHKBP1-210ENST00000595874 LOC107984156A0A0G2JMH3 177 aa5.85□□□□□ -1.47
SHKBP1-210ENST00000595874 IGLV6-57P01721 117 aa5.85□□□□□ -1.47
SHKBP1-210ENST00000595874 HRCT1Q6UXD1 115 aa5.85□□□□□ -1.47
SHKBP1-210ENST00000595874 Q6ZRX8 168 aa5.85□□□□□ -1.47
SHKBP1-210ENST00000595874 ARL17AQ8IVW1 177 aa5.85□□□□□ -1.47
SHKBP1-210ENST00000595874 LINC00308Q8TCZ7 52 aa5.85□□□□□ -1.47
SHKBP1-210ENST00000595874 ZNF73O43830 326 aaPredicted RBP5.84□□□□□ -1.47
SHKBP1-210ENST00000595874 NDUFC2O95298 119 aa5.84□□□□□ -1.47
SHKBP1-210ENST00000595874 LINC01545Q5VT33 79 aa5.84□□□□□ -1.47
SHKBP1-210ENST00000595874 LITAFQ99732 161 aa5.84□□□□□ -1.47
SHKBP1-210ENST00000595874 LINC00483Q53H64 154 aa5.83□□□□□ -1.48
SHKBP1-210ENST00000595874 SPAG11AQ6PDA7 123 aa5.83□□□□□ -1.48
SHKBP1-210ENST00000595874 PET117Q6UWS5 81 aa5.83□□□□□ -1.48
SHKBP1-210ENST00000595874 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
SHKBP1-210ENST00000595874 ANKRD39Q53RE8 183 aa5.82□□□□□ -1.48
SHKBP1-210ENST00000595874 DEFB105AQ8NG35 78 aa5.81□□□□□ -1.48
SHKBP1-210ENST00000595874 JOSD1Q15040 202 aaPredicted RBP5.8□□□□□ -1.48
SHKBP1-210ENST00000595874 SPANXCQ9NY87 97 aa5.8□□□□□ -1.48
SHKBP1-210ENST00000595874 SPINK1P00995 79 aa5.79□□□□□ -1.48
SHKBP1-210ENST00000595874 HINT1P49773 126 aaPredicted RBP5.79□□□□□ -1.48
SHKBP1-210ENST00000595874 SCGB1D4Q6XE38 83 aa5.79□□□□□ -1.48
SHKBP1-210ENST00000595874 A0A0G2JQZ4 141 aa5.78□□□□□ -1.48
SHKBP1-210ENST00000595874 A0A0U1RQV1 116 aa5.78□□□□□ -1.48
SHKBP1-210ENST00000595874 COX7BP24311 80 aa5.78□□□□□ -1.48
SHKBP1-210ENST00000595874 Q1RN00 199 aa5.78□□□□□ -1.48
SHKBP1-210ENST00000595874 KRTAP13-3Q3SY46 172 aa5.78□□□□□ -1.48
SHKBP1-210ENST00000595874 C6orf99Q4VX62 202 aa5.78□□□□□ -1.48
SHKBP1-210ENST00000595874 SSBP3-AS1Q7Z2R9 100 aa5.78□□□□□ -1.48
SHKBP1-210ENST00000595874 PCP2Q8IVA1 136 aa5.78□□□□□ -1.48
SHKBP1-210ENST00000595874 Q8N377 158 aa5.78□□□□□ -1.48
SHKBP1-210ENST00000595874 TIMM17BO60830 172 aa5.77□□□□□ -1.49
SHKBP1-210ENST00000595874 MUSTN1Q8IVN3 82 aa5.77□□□□□ -1.49
SHKBP1-210ENST00000595874 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
SHKBP1-210ENST00000595874 C20orf202A1L168 122 aa5.76□□□□□ -1.49
SHKBP1-210ENST00000595874 A6NDN8 102 aa5.76□□□□□ -1.49
SHKBP1-210ENST00000595874 H7C2G1 150 aa5.76□□□□□ -1.49
SHKBP1-210ENST00000595874 TAL2Q16559 108 aa5.76□□□□□ -1.49
SHKBP1-210ENST00000595874 FP248Q71RG6 208 aaPredicted RBP5.76□□□□□ -1.49
SHKBP1-210ENST00000595874 SPANXDQ9BXN6 97 aa5.75□□□□□ -1.49
SHKBP1-210ENST00000595874 KRTAP4-1Q9BYQ7 146 aa5.75□□□□□ -1.49
SHKBP1-210ENST00000595874 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
SHKBP1-210ENST00000595874 SLC25A20O43772 301 aa5.73□□□□□ -1.49
SHKBP1-210ENST00000595874 ELOF1P60002 83 aaKnown RBP5.73□□□□□ -1.49
SHKBP1-210ENST00000595874 CTAG1AP78358 180 aa5.73□□□□□ -1.49
SHKBP1-210ENST00000595874 COA6Q5JTJ3 125 aaKnown RBP5.73□□□□□ -1.49
SHKBP1-210ENST00000595874 LINC00518Q8N0U6 118 aa5.73□□□□□ -1.49
SHKBP1-210ENST00000595874 DHRS4-AS1Q9P1J3 65 aa5.73□□□□□ -1.49
SHKBP1-210ENST00000595874 LAMTOR3Q9UHA4 124 aa5.72□□□□□ -1.49
SHKBP1-210ENST00000595874 CBY1Q9Y3M2 126 aa5.72□□□□□ -1.49
SHKBP1-210ENST00000595874 S100A2P29034 98 aa5.7□□□□□ -1.5
SHKBP1-210ENST00000595874 XP32Q5T750 250 aa5.7□□□□□ -1.5
SHKBP1-210ENST00000595874 HIST3H2BBQ8N257 126 aa5.7□□□□□ -1.5
SHKBP1-210ENST00000595874 C12orf57Q99622 126 aa5.7□□□□□ -1.5
SHKBP1-210ENST00000595874 SPRR1BP22528 89 aa5.69□□□□□ -1.5
SHKBP1-210ENST00000595874 LCE2AQ5TA79 106 aaPredicted RBP5.69□□□□□ -1.5
SHKBP1-210ENST00000595874 SMIM11BQ8TCY0 68 aa5.69□□□□□ -1.5
SHKBP1-210ENST00000595874 TEX49A0A1B0GTD5 131 aa5.68□□□□□ -1.5
SHKBP1-210ENST00000595874 IFITM1P13164 125 aa5.68□□□□□ -1.5
SHKBP1-210ENST00000595874 RPS29P62273 56 aaKnown RBP5.68□□□□□ -1.5
SHKBP1-210ENST00000595874 ASB16-AS1Q495Z4 193 aa5.68□□□□□ -1.5
SHKBP1-210ENST00000595874 SLC25A34Q6PIV7 304 aa5.68□□□□□ -1.5
SHKBP1-210ENST00000595874 SMIM29Q86T20 159 aa5.68□□□□□ -1.5
SHKBP1-210ENST00000595874 HIST1H2BLQ99880 126 aa5.68□□□□□ -1.5
SHKBP1-210ENST00000595874 A0A1B0GWB2 263 aa5.67□□□□□ -1.5
SHKBP1-210ENST00000595874 LINC01547P58512 204 aaPredicted RBP5.67□□□□□ -1.5
SHKBP1-210ENST00000595874 SEC61BP60468 96 aaKnown RBP5.67□□□□□ -1.5
SHKBP1-210ENST00000595874 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
SHKBP1-210ENST00000595874 LIMD2Q9BT23 127 aa5.66□□□□□ -1.5
SHKBP1-210ENST00000595874 PRO1933Q9H354 126 aa5.66□□□□□ -1.5
SHKBP1-210ENST00000595874 TRAV13-2A0A0B4J235 113 aa5.65□□□□□ -1.5
SHKBP1-210ENST00000595874 A4D1N5 150 aa5.65□□□□□ -1.5
SHKBP1-210ENST00000595874 C5orf52A6NGY3 159 aa5.65□□□□□ -1.5
SHKBP1-210ENST00000595874 HSBP1L1C9JCN9 74 aa5.65□□□□□ -1.5
SHKBP1-210ENST00000595874 COPS9Q8WXC6 57 aa5.65□□□□□ -1.5
SHKBP1-210ENST00000595874 SCGB1D1O95968 90 aa5.64□□□□□ -1.51
SHKBP1-210ENST00000595874 S100A6P06703 90 aa5.64□□□□□ -1.51
SHKBP1-210ENST00000595874 SNRPEP62304 92 aaKnown RBP5.64□□□□□ -1.51
SHKBP1-210ENST00000595874 PCOTHQ58A44 107 aa5.64□□□□□ -1.51
SHKBP1-210ENST00000595874 TRBV7-6A0A0J9YX20 115 aa5.63□□□□□ -1.51
SHKBP1-210ENST00000595874 AKR1D1P51857 326 aa5.63□□□□□ -1.51
SHKBP1-210ENST00000595874 Q6ZVH6 145 aa5.63□□□□□ -1.51
SHKBP1-210ENST00000595874 IGLV8-61A0A075B6I0 122 aa5.61□□□□□ -1.51
SHKBP1-210ENST00000595874 IGLV5-48A0A075B6I7 105 aa5.61□□□□□ -1.51
SHKBP1-210ENST00000595874 Q6ZQY7 126 aa5.61□□□□□ -1.51
SHKBP1-210ENST00000595874 HIST1H4GQ99525 98 aa5.61□□□□□ -1.51
SHKBP1-210ENST00000595874 C1orf195Q5TG92 126 aa5.6□□□□□ -1.51
SHKBP1-210ENST00000595874 LINC00575Q6W349 94 aa5.6□□□□□ -1.51
SHKBP1-210ENST00000595874 F8WEM9 126 aa5.59□□□□□ -1.51
SHKBP1-210ENST00000595874 S100A1P23297 94 aa5.59□□□□□ -1.51
SHKBP1-210ENST00000595874 VAMP3Q15836 100 aa5.59□□□□□ -1.51
SHKBP1-210ENST00000595874 NHP2Q9NX24 153 aaKnown RBP5.59□□□□□ -1.51
SHKBP1-210ENST00000595874 hADV29S1A0JD25 119 aa5.58□□□□□ -1.52
SHKBP1-210ENST00000595874 CD164Q04900 197 aa5.58□□□□□ -1.52
SHKBP1-210ENST00000595874 C14orf144Q96I85 54 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms