RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 Q6ZRX8 168 aa9.22□□□□□ -0.93
IRF3-210ENST00000595240 Q9BRP9 147 aa9.22□□□□□ -0.93
IRF3-210ENST00000595240 PPDPFQ9H3Y8 114 aa9.22□□□□□ -0.93
IRF3-210ENST00000595240 TRAV23DV6A0A075B6W5 121 aa9.21□□□□□ -0.94
IRF3-210ENST00000595240 KRTDAPP60985 99 aa9.2□□□□□ -0.94
IRF3-210ENST00000595240 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
IRF3-210ENST00000595240 ZNF815PA8K554 130 aa9.19□□□□□ -0.94
IRF3-210ENST00000595240 GAGE2AQ6NT46 116 aa9.19□□□□□ -0.94
IRF3-210ENST00000595240 TTTY13Q9BZ97 58 aa9.19□□□□□ -0.94
IRF3-210ENST00000595240 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
IRF3-210ENST00000595240 ZNF73O43830 326 aaPredicted RBP9.18□□□□□ -0.94
IRF3-210ENST00000595240 Q8NBF4 154 aa9.18□□□□□ -0.94
IRF3-210ENST00000595240 MUC2Q02817 5179 aa9.18□□□□□ -0.94
IRF3-210ENST00000595240 IGLV7-46A0A075B6I9 117 aa9.16□□□□□ -0.94
IRF3-210ENST00000595240 JOSD1Q15040 202 aaPredicted RBP9.16□□□□□ -0.94
IRF3-210ENST00000595240 C4orf48Q5BLP8 95 aa9.16□□□□□ -0.94
IRF3-210ENST00000595240 CBY1Q9Y3M2 126 aa9.16□□□□□ -0.94
IRF3-210ENST00000595240 C20orf202A1L168 122 aa9.15□□□□□ -0.94
IRF3-210ENST00000595240 TPRXLQ17RH7 258 aa9.15□□□□□ -0.94
IRF3-210ENST00000595240 HIST3H2BBQ8N257 126 aa9.15□□□□□ -0.94
IRF3-210ENST00000595240 SPINK1P00995 79 aa9.13□□□□□ -0.95
IRF3-210ENST00000595240 S100A6P06703 90 aa9.13□□□□□ -0.95
IRF3-210ENST00000595240 MOBPQ13875 183 aa9.13□□□□□ -0.95
IRF3-210ENST00000595240 SPANXDQ9BXN6 97 aa9.13□□□□□ -0.95
IRF3-210ENST00000595240 IGLV9-49A0A0B4J1Y8 123 aa9.12□□□□□ -0.95
IRF3-210ENST00000595240 ANKRD39Q53RE8 183 aa9.12□□□□□ -0.95
IRF3-210ENST00000595240 SSBP3-AS1Q7Z2R9 100 aa9.12□□□□□ -0.95
IRF3-210ENST00000595240 OR13C6PQ8NH95 151 aa9.12□□□□□ -0.95
IRF3-210ENST00000595240 HINT1P49773 126 aaPredicted RBP9.11□□□□□ -0.95
IRF3-210ENST00000595240 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
IRF3-210ENST00000595240 HIST1H2BLQ99880 126 aa9.11□□□□□ -0.95
IRF3-210ENST00000595240 C5orf52A6NGY3 159 aa9.1□□□□□ -0.95
IRF3-210ENST00000595240 S100A2P29034 98 aa9.1□□□□□ -0.95
IRF3-210ENST00000595240 LINC00518Q8N0U6 118 aa9.1□□□□□ -0.95
IRF3-210ENST00000595240 ATOH7Q8N100 152 aa9.1□□□□□ -0.95
IRF3-210ENST00000595240 ST20-AS1Q8NBB2 130 aa9.1□□□□□ -0.95
IRF3-210ENST00000595240 CDIP1Q9H305 208 aa9.1□□□□□ -0.95
IRF3-210ENST00000595240 AKR1D1P51857 326 aa9.09□□□□□ -0.95
IRF3-210ENST00000595240 SNRPEP62304 92 aaKnown RBP9.09□□□□□ -0.95
IRF3-210ENST00000595240 SCGB1D4Q6XE38 83 aa9.09□□□□□ -0.95
IRF3-210ENST00000595240 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
IRF3-210ENST00000595240 DHRS4-AS1Q9P1J3 65 aa9.07□□□□□ -0.96
IRF3-210ENST00000595240 IFITM1P13164 125 aa9.06□□□□□ -0.96
IRF3-210ENST00000595240 PCP2Q8IVA1 136 aa9.06□□□□□ -0.96
IRF3-210ENST00000595240 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
IRF3-210ENST00000595240 SPRR1BP22528 89 aa9.05□□□□□ -0.96
IRF3-210ENST00000595240 ELOF1P60002 83 aaKnown RBP9.05□□□□□ -0.96
IRF3-210ENST00000595240 C6orf99Q4VX62 202 aa9.05□□□□□ -0.96
IRF3-210ENST00000595240 Q6ZVH6 145 aa9.05□□□□□ -0.96
IRF3-210ENST00000595240 COX7BP24311 80 aa9.04□□□□□ -0.96
IRF3-210ENST00000595240 C9orf153Q5TBE3 101 aa9.04□□□□□ -0.96
IRF3-210ENST00000595240 Q8N377 158 aa9.04□□□□□ -0.96
IRF3-210ENST00000595240 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
IRF3-210ENST00000595240 KRTAP13-3Q3SY46 172 aa9.02□□□□□ -0.97
IRF3-210ENST00000595240 MUSTN1Q8IVN3 82 aa9.02□□□□□ -0.97
IRF3-210ENST00000595240 TRBV7-6A0A0J9YX20 115 aa9.01□□□□□ -0.97
IRF3-210ENST00000595240 SLC25A20O43772 301 aa9□□□□□ -0.97
IRF3-210ENST00000595240 SLC25A34Q6PIV7 304 aa9□□□□□ -0.97
IRF3-210ENST00000595240 A0A0U1RQV1 116 aa8.99□□□□□ -0.97
IRF3-210ENST00000595240 A6NDN8 102 aa8.99□□□□□ -0.97
IRF3-210ENST00000595240 A0A1B0GWB2 263 aa8.97□□□□□ -0.97
IRF3-210ENST00000595240 LAMTOR3Q9UHA4 124 aa8.97□□□□□ -0.97
IRF3-210ENST00000595240 TRAV13-2A0A0B4J235 113 aa8.95□□□□□ -0.98
IRF3-210ENST00000595240 TAL2Q16559 108 aa8.95□□□□□ -0.98
IRF3-210ENST00000595240 FAT4Q6V0I7 4981 aa8.94□□□□□ -0.98
IRF3-210ENST00000595240 TEX49A0A1B0GTD5 131 aa8.94□□□□□ -0.98
IRF3-210ENST00000595240 HSBP1L1C9JCN9 74 aa8.94□□□□□ -0.98
IRF3-210ENST00000595240 DEFB105AQ8NG35 78 aa8.94□□□□□ -0.98
IRF3-210ENST00000595240 SCGB1D1O95968 90 aa8.93□□□□□ -0.98
IRF3-210ENST00000595240 SMIM11BQ8TCY0 68 aa8.93□□□□□ -0.98
IRF3-210ENST00000595240 IGLV5-48A0A075B6I7 105 aa8.92□□□□□ -0.98
IRF3-210ENST00000595240 A4D1N5 150 aa8.92□□□□□ -0.98
IRF3-210ENST00000595240 Q1RN00 199 aa8.92□□□□□ -0.98
IRF3-210ENST00000595240 LINC01547P58512 204 aaPredicted RBP8.91□□□□□ -0.98
IRF3-210ENST00000595240 ASB16-AS1Q495Z4 193 aa8.91□□□□□ -0.98
IRF3-210ENST00000595240 SMIM29Q86T20 159 aa8.91□□□□□ -0.98
IRF3-210ENST00000595240 HRCT1Q6UXD1 115 aa8.9□□□□□ -0.98
IRF3-210ENST00000595240 LIMD2Q9BT23 127 aa8.89□□□□□ -0.99
IRF3-210ENST00000595240 PRO1933Q9H354 126 aa8.89□□□□□ -0.99
IRF3-210ENST00000595240 CD164Q04900 197 aa8.88□□□□□ -0.99
IRF3-210ENST00000595240 NHP2Q9NX24 153 aaKnown RBP8.88□□□□□ -0.99
IRF3-210ENST00000595240 TMA7Q9Y2S6 64 aaKnown RBP8.87□□□□□ -0.99
IRF3-210ENST00000595240 LCE2AQ5TA79 106 aaPredicted RBP8.86□□□□□ -0.99
IRF3-210ENST00000595240 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
IRF3-210ENST00000595240 XP32Q5T750 250 aa8.85□□□□□ -0.99
IRF3-210ENST00000595240 H7C2G1 150 aa8.84□□□□□ -0.99
IRF3-210ENST00000595240 VAMP3Q15836 100 aa8.84□□□□□ -0.99
IRF3-210ENST00000595240 COX8AP10176 69 aa8.83□□□□□ -1
IRF3-210ENST00000595240 LINC00575Q6W349 94 aa8.83□□□□□ -1
IRF3-210ENST00000595240 Q5XG85 94 aa8.82□□□□□ -1
IRF3-210ENST00000595240 A0A0G2JQZ4 141 aa8.81□□□□□ -1
IRF3-210ENST00000595240 DLEU1O43261 78 aa8.81□□□□□ -1
IRF3-210ENST00000595240 PYY3Q5JQD4 70 aa8.81□□□□□ -1
IRF3-210ENST00000595240 HIST1H4GQ99525 98 aa8.81□□□□□ -1
IRF3-210ENST00000595240 VAMP8Q9BV40 100 aa8.8□□□□□ -1
IRF3-210ENST00000595240 KRTAP4-1Q9BYQ7 146 aa8.8□□□□□ -1
IRF3-210ENST00000595240 SPATA45Q537H7 98 aa8.79□□□□□ -1
IRF3-210ENST00000595240 C12orf57Q99622 126 aa8.79□□□□□ -1
IRF3-210ENST00000595240 PAM16Q9Y3D7 125 aa8.79□□□□□ -1
IRF3-210ENST00000595240 hADV29S1A0JD25 119 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms