RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 IGKV2D-28P01615 120 aa9.34□□□□□ -0.91
USE1-206ENST00000595101 LGALS3P17931 250 aaKnown RBP9.34□□□□□ -0.91
USE1-206ENST00000595101 PRO0628Q9UI54 55 aa9.33□□□□□ -0.92
USE1-206ENST00000595101 IGKV2D-26A0A0A0MRZ7 120 aa9.32□□□□□ -0.92
USE1-206ENST00000595101 TTTY13Q9BZ97 58 aa9.32□□□□□ -0.92
USE1-206ENST00000595101 A6NDN8 102 aa9.32□□□□□ -0.92
USE1-206ENST00000595101 K7EP34 96 aa9.32□□□□□ -0.92
USE1-206ENST00000595101 ATOH7Q8N100 152 aa9.32□□□□□ -0.92
USE1-206ENST00000595101 LINC01600Q96MT4 127 aa9.31□□□□□ -0.92
USE1-206ENST00000595101 IGLV1-50A0A075B6I6 118 aa9.29□□□□□ -0.92
USE1-206ENST00000595101 A0A0J9YXY3 114 aa9.29□□□□□ -0.92
USE1-206ENST00000595101 EIF4EBP3O60516 100 aaPredicted RBP9.29□□□□□ -0.92
USE1-206ENST00000595101 NMUP48645 174 aa9.29□□□□□ -0.92
USE1-206ENST00000595101 ADAMTSL4-AS1Q5T5F5 129 aa9.29□□□□□ -0.92
USE1-206ENST00000595101 PAM16Q9Y3D7 125 aa9.29□□□□□ -0.92
USE1-206ENST00000595101 H0Y9J4 135 aa9.28□□□□□ -0.92
USE1-206ENST00000595101 ZNF861PO60384 105 aa9.28□□□□□ -0.92
USE1-206ENST00000595101 HINT1P49773 126 aaPredicted RBP9.28□□□□□ -0.92
USE1-206ENST00000595101 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
USE1-206ENST00000595101 NCR3O14931 201 aa9.27□□□□□ -0.92
USE1-206ENST00000595101 BCE1O60756 84 aa9.27□□□□□ -0.92
USE1-206ENST00000595101 NPC2P61916 151 aa9.27□□□□□ -0.92
USE1-206ENST00000595101 DIRC1Q969H9 104 aa9.27□□□□□ -0.92
USE1-206ENST00000595101 SPATA45Q537H7 98 aa9.27□□□□□ -0.93
USE1-206ENST00000595101 SOSTDC1Q6X4U4 206 aa9.26□□□□□ -0.93
USE1-206ENST00000595101 KRTAP1-4P0C5Y4 121 aa9.25□□□□□ -0.93
USE1-206ENST00000595101 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
USE1-206ENST00000595101 Q6Q795 121 aa9.25□□□□□ -0.93
USE1-206ENST00000595101 LITAFQ99732 161 aa9.25□□□□□ -0.93
USE1-206ENST00000595101 HMCN2Q8NDA2 5059 aa9.25□□□□□ -0.93
USE1-206ENST00000595101 M0R378 163 aa9.24□□□□□ -0.93
USE1-206ENST00000595101 LOC107984156A0A0G2JMH3 177 aa9.24□□□□□ -0.93
USE1-206ENST00000595101 ZNF815PA8K554 130 aa9.24□□□□□ -0.93
USE1-206ENST00000595101 KRTAP13-1Q8IUC0 172 aa9.24□□□□□ -0.93
USE1-206ENST00000595101 ARL17AQ8IVW1 177 aa9.24□□□□□ -0.93
USE1-206ENST00000595101 SPANXDQ9BXN6 97 aa9.24□□□□□ -0.93
USE1-206ENST00000595101 PRLHP81277 87 aa9.23□□□□□ -0.93
USE1-206ENST00000595101 Q6ZVH6 145 aa9.22□□□□□ -0.93
USE1-206ENST00000595101 PRR26Q8N8Z3 221 aa9.22□□□□□ -0.93
USE1-206ENST00000595101 RPL28P46779 137 aaKnown RBP9.21□□□□□ -0.94
USE1-206ENST00000595101 UBE2AP49459 152 aa9.21□□□□□ -0.94
USE1-206ENST00000595101 BVES-AS1Q5T3Y7 98 aa9.21□□□□□ -0.94
USE1-206ENST00000595101 PCP2Q8IVA1 136 aa9.21□□□□□ -0.94
USE1-206ENST00000595101 TRBV10-3A0A0K0K1G6 114 aa9.2□□□□□ -0.94
USE1-206ENST00000595101 C9orf118A6NHY6 69 aa9.2□□□□□ -0.94
USE1-206ENST00000595101 FAM19A1Q7Z5A9 133 aa9.2□□□□□ -0.94
USE1-206ENST00000595101 C9JAW5 83 aa9.19□□□□□ -0.94
USE1-206ENST00000595101 F8W1H4 67 aa9.19□□□□□ -0.94
USE1-206ENST00000595101 ANAPC11Q9NYG5 84 aa9.19□□□□□ -0.94
USE1-206ENST00000595101 LINC00308Q8TCZ7 52 aa9.18□□□□□ -0.94
USE1-206ENST00000595101 KRTAP3-3Q9BYR6 98 aa9.17□□□□□ -0.94
USE1-206ENST00000595101 KRTAP3-2Q9BYR7 98 aa9.17□□□□□ -0.94
USE1-206ENST00000595101 TIMM17BO60830 172 aa9.17□□□□□ -0.94
USE1-206ENST00000595101 KCNQ1DNQ9H478 68 aa9.17□□□□□ -0.94
USE1-206ENST00000595101 TAL2Q16559 108 aa9.16□□□□□ -0.94
USE1-206ENST00000595101 NDUFC2O95298 119 aa9.15□□□□□ -0.94
USE1-206ENST00000595101 NDUFV3P56181 108 aaKnown RBP9.15□□□□□ -0.94
USE1-206ENST00000595101 SCGB1D4Q6XE38 83 aa9.15□□□□□ -0.94
USE1-206ENST00000595101 TRBV10-2A0A0K0K1G8 114 aa9.14□□□□□ -0.95
USE1-206ENST00000595101 SPRR1AP35321 89 aa9.14□□□□□ -0.95
USE1-206ENST00000595101 A0A087X002 238 aa9.14□□□□□ -0.95
USE1-206ENST00000595101 KRTAP4-16G5E9R7 235 aaPredicted RBP9.14□□□□□ -0.95
USE1-206ENST00000595101 PRYO14603 147 aa9.14□□□□□ -0.95
USE1-206ENST00000595101 CCDC179H3BU77 68 aa9.12□□□□□ -0.95
USE1-206ENST00000595101 IGLV6-57P01721 117 aa9.12□□□□□ -0.95
USE1-206ENST00000595101 HIGD2AQ9BW72 106 aa9.12□□□□□ -0.95
USE1-206ENST00000595101 CDIP1Q9H305 208 aa9.12□□□□□ -0.95
USE1-206ENST00000595101 IFITM1P13164 125 aa9.11□□□□□ -0.95
USE1-206ENST00000595101 C4orf26Q17RF5 130 aa9.11□□□□□ -0.95
USE1-206ENST00000595101 S100A7L2Q5SY68 101 aa9.11□□□□□ -0.95
USE1-206ENST00000595101 LINC00337Q8N6G1 96 aa9.1□□□□□ -0.95
USE1-206ENST00000595101 SPCS1Q9Y6A9 102 aa9.09□□□□□ -0.95
USE1-206ENST00000595101 ETDCA0A1B0GVM5 59 aa9.09□□□□□ -0.95
USE1-206ENST00000595101 C1orf195Q5TG92 126 aa9.09□□□□□ -0.95
USE1-206ENST00000595101 A0A1W2PPM0 123 aa9.08□□□□□ -0.96
USE1-206ENST00000595101 FABP2P12104 132 aa9.08□□□□□ -0.96
USE1-206ENST00000595101 KRTAP13-2Q52LG2 175 aa9.08□□□□□ -0.96
USE1-206ENST00000595101 MUSTN1Q8IVN3 82 aa9.08□□□□□ -0.96
USE1-206ENST00000595101 SMCR5Q8TEV8 140 aa9.08□□□□□ -0.96
USE1-206ENST00000595101 TRAV23DV6A0A075B6W5 121 aa9.07□□□□□ -0.96
USE1-206ENST00000595101 ERC2-IT1O76042 136 aa9.07□□□□□ -0.96
USE1-206ENST00000595101 MT-ATP8P03928 68 aa9.06□□□□□ -0.96
USE1-206ENST00000595101 COX8AP10176 69 aa9.06□□□□□ -0.96
USE1-206ENST00000595101 Q9BRP9 147 aa9.06□□□□□ -0.96
USE1-206ENST00000595101 ZNF73O43830 326 aaPredicted RBP9.05□□□□□ -0.96
USE1-206ENST00000595101 CRYGAP11844 174 aa9.05□□□□□ -0.96
USE1-206ENST00000595101 LCE2DQ5TA82 110 aaPredicted RBP9.05□□□□□ -0.96
USE1-206ENST00000595101 RPL13AP40429 203 aaKnown RBP9.04□□□□□ -0.96
USE1-206ENST00000595101 CD164Q04900 197 aa9.04□□□□□ -0.96
USE1-206ENST00000595101 SLC25A34Q6PIV7 304 aa9.04□□□□□ -0.96
USE1-206ENST00000595101 SPRR4Q96PI1 79 aa9.04□□□□□ -0.96
USE1-206ENST00000595101 UBR4Q5T4S7 5183 aa9.03□□□□□ -0.96
USE1-206ENST00000595101 Q6ZRX8 168 aa9.03□□□□□ -0.96
USE1-206ENST00000595101 NAA38Q9BRA0 125 aaKnown RBP9.03□□□□□ -0.96
USE1-206ENST00000595101 LRP2P98164 4655 aa9.03□□□□□ -0.96
USE1-206ENST00000595101 TYMSOSQ8TAI1 123 aa9.02□□□□□ -0.97
USE1-206ENST00000595101 C3orf22Q8N5N4 141 aa9.01□□□□□ -0.97
USE1-206ENST00000595101 FAM229BQ4G0N7 80 aa9□□□□□ -0.97
USE1-206ENST00000595101 H3BMG7 143 aa8.98□□□□□ -0.97
USE1-206ENST00000595101 H3BUT2 72 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms