RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	13.76	□□□□□ -0.21
PNKP-205	ENST00000595081	DLEU1	O43261	78 aa		13.76	□□□□□ -0.21
PNKP-205	ENST00000595081	KRTAP1-4	P0C5Y4	121 aa		13.76	□□□□□ -0.21
PNKP-205	ENST00000595081	LINC00337	Q8N6G1	96 aa		13.76	□□□□□ -0.21
PNKP-205	ENST00000595081	TRAV23DV6	A0A075B6W5	121 aa		13.74	□□□□□ -0.21
PNKP-205	ENST00000595081	ETDC	A0A1B0GVM5	59 aa		13.74	□□□□□ -0.21
PNKP-205	ENST00000595081	LINC00518	Q8N0U6	118 aa		13.74	□□□□□ -0.21
PNKP-205	ENST00000595081	HERC1	Q15751	4861 aa		13.73	□□□□□ -0.21
PNKP-205	ENST00000595081	TNXB	P22105	4242 aa		13.73	□□□□□ -0.21
PNKP-205	ENST00000595081	HIGD2A	Q9BW72	106 aa		13.72	□□□□□ -0.21
PNKP-205	ENST00000595081	SLC25A34	Q6PIV7	304 aa		13.71	□□□□□ -0.21
PNKP-205	ENST00000595081		B5MCH6	92 aa		13.7	□□□□□ -0.22
PNKP-205	ENST00000595081	ZNF73	O43830	326 aa	Predicted RBP	13.69	□□□□□ -0.22
PNKP-205	ENST00000595081	KRTAP10-8	P60410	259 aa		13.69	□□□□□ -0.22
PNKP-205	ENST00000595081	PRR26	Q8N8Z3	221 aa		13.69	□□□□□ -0.22
PNKP-205	ENST00000595081	HIST1H4G	Q99525	98 aa		13.69	□□□□□ -0.22
PNKP-205	ENST00000595081	C2orf91	Q6ZV80	131 aa		13.67	□□□□□ -0.22
PNKP-205	ENST00000595081		A4D1N5	150 aa		13.66	□□□□□ -0.22
PNKP-205	ENST00000595081		A6NDN8	102 aa		13.66	□□□□□ -0.22
PNKP-205	ENST00000595081	ANAPC11	Q9NYG5	84 aa		13.66	□□□□□ -0.22
PNKP-205	ENST00000595081	CBY1	Q9Y3M2	126 aa		13.66	□□□□□ -0.22
PNKP-205	ENST00000595081	SMCR5	Q8TEV8	140 aa		13.65	□□□□□ -0.22
PNKP-205	ENST00000595081	HIGD1B	Q9P298	99 aa		13.65	□□□□□ -0.22
PNKP-205	ENST00000595081		Q6ZRX8	168 aa		13.64	□□□□□ -0.23
PNKP-205	ENST00000595081		Q9BRP9	147 aa		13.62	□□□□□ -0.23
PNKP-205	ENST00000595081	TRAV13-2	A0A0B4J235	113 aa		13.61	□□□□□ -0.23
PNKP-205	ENST00000595081		A0A087X002	238 aa		13.6	□□□□□ -0.23
PNKP-205	ENST00000595081	ERC2-IT1	O76042	136 aa		13.6	□□□□□ -0.23
PNKP-205	ENST00000595081	C6orf99	Q4VX62	202 aa		13.6	□□□□□ -0.23
PNKP-205	ENST00000595081	C12orf57	Q99622	126 aa		13.6	□□□□□ -0.23
PNKP-205	ENST00000595081	HINT1	P49773	126 aa	Predicted RBP	13.59	□□□□□ -0.23
PNKP-205	ENST00000595081	SPRR4	Q96PI1	79 aa		13.58	□□□□□ -0.24
PNKP-205	ENST00000595081	CRYGA	P11844	174 aa		13.56	□□□□□ -0.24
PNKP-205	ENST00000595081	RPL13A	P40429	203 aa	Known RBP	13.56	□□□□□ -0.24
PNKP-205	ENST00000595081	SMIM11B	Q8TCY0	68 aa		13.55	□□□□□ -0.24
PNKP-205	ENST00000595081	ZNF706	Q9Y5V0	76 aa	Predicted RBP	13.55	□□□□□ -0.24
PNKP-205	ENST00000595081	COX7B	P24311	80 aa		13.54	□□□□□ -0.24
PNKP-205	ENST00000595081	FAM229B	Q4G0N7	80 aa		13.54	□□□□□ -0.24
PNKP-205	ENST00000595081	ELOF1	P60002	83 aa	Known RBP	13.53	□□□□□ -0.24
PNKP-205	ENST00000595081	TAL2	Q16559	108 aa		13.52	□□□□□ -0.25
PNKP-205	ENST00000595081	KRTAP13-2	Q52LG2	175 aa		13.52	□□□□□ -0.25
PNKP-205	ENST00000595081	CEND1	Q8N111	149 aa		13.51	□□□□□ -0.25
PNKP-205	ENST00000595081	UQCR10	Q9UDW1	63 aa		13.51	□□□□□ -0.25
PNKP-205	ENST00000595081	TRBV7-6	A0A0J9YX20	115 aa		13.49	□□□□□ -0.25
PNKP-205	ENST00000595081	CFC1B	P0CG36	223 aa		13.49	□□□□□ -0.25
PNKP-205	ENST00000595081	CFC1	P0CG37	223 aa		13.49	□□□□□ -0.25
PNKP-205	ENST00000595081	GAGE2A	Q6NT46	116 aa		13.49	□□□□□ -0.25
PNKP-205	ENST00000595081	TYMSOS	Q8TAI1	123 aa		13.49	□□□□□ -0.25
PNKP-205	ENST00000595081	LOC105371267	A0A1B0GV96	52 aa		13.48	□□□□□ -0.25
PNKP-205	ENST00000595081	SMIM6	P0DI80	62 aa		13.48	□□□□□ -0.25
PNKP-205	ENST00000595081	DHRS4-AS1	Q9P1J3	65 aa		13.48	□□□□□ -0.25
PNKP-205	ENST00000595081		A0A1B0GWB2	263 aa		13.47	□□□□□ -0.25
PNKP-205	ENST00000595081	ST20-AS1	Q8NBB2	130 aa		13.47	□□□□□ -0.25
PNKP-205	ENST00000595081	FXYD2	P54710	66 aa		13.46	□□□□□ -0.25
PNKP-205	ENST00000595081	LINC00483	Q53H64	154 aa		13.46	□□□□□ -0.25
PNKP-205	ENST00000595081	C3orf22	Q8N5N4	141 aa		13.46	□□□□□ -0.25
PNKP-205	ENST00000595081	PRO1933	Q9H354	126 aa		13.46	□□□□□ -0.25
PNKP-205	ENST00000595081	HSD52	Q0P140	79 aa		13.45	□□□□□ -0.26
PNKP-205	ENST00000595081	RAB37	Q96AX2	223 aa		13.45	□□□□□ -0.26
PNKP-205	ENST00000595081		H7C2G1	150 aa		13.44	□□□□□ -0.26
PNKP-205	ENST00000595081		A0A0B4J2C4	111 aa		13.43	□□□□□ -0.26
PNKP-205	ENST00000595081	TMEM238L	A0A1B0GVL6	79 aa		13.42	□□□□□ -0.26
PNKP-205	ENST00000595081		A6NJY4	79 aa		13.42	□□□□□ -0.26
PNKP-205	ENST00000595081	VAMP3	Q15836	100 aa		13.39	□□□□□ -0.27
PNKP-205	ENST00000595081	IGLV9-49	A0A0B4J1Y8	123 aa		13.35	□□□□□ -0.27
PNKP-205	ENST00000595081	NHP2	Q9NX24	153 aa	Known RBP	13.35	□□□□□ -0.27
PNKP-205	ENST00000595081	PRO1854	Q9UHT4	67 aa		13.35	□□□□□ -0.27
PNKP-205	ENST00000595081	HMCN2	Q8NDA2	5059 aa		13.34	□□□□□ -0.27
PNKP-205	ENST00000595081	LINC00575	Q6W349	94 aa		13.34	□□□□□ -0.27
PNKP-205	ENST00000595081	LINC00304	Q8N9R0	145 aa		13.34	□□□□□ -0.27
PNKP-205	ENST00000595081	DEFB105A	Q8NG35	78 aa		13.34	□□□□□ -0.27
PNKP-205	ENST00000595081		K7ERJ3	54 aa		13.33	□□□□□ -0.28
PNKP-205	ENST00000595081	TSPAN13	O95857	204 aa		13.33	□□□□□ -0.28
PNKP-205	ENST00000595081	SPRR1B	P22528	89 aa		13.32	□□□□□ -0.28
PNKP-205	ENST00000595081	MOBP	Q13875	183 aa		13.32	□□□□□ -0.28
PNKP-205	ENST00000595081		Q1RN00	199 aa		13.32	□□□□□ -0.28
PNKP-205	ENST00000595081	BVES-AS1	Q5T3Y7	98 aa		13.32	□□□□□ -0.28
PNKP-205	ENST00000595081	SLC25A20	O43772	301 aa		13.31	□□□□□ -0.28
PNKP-205	ENST00000595081		Q8NBF4	154 aa		13.29	□□□□□ -0.28
PNKP-205	ENST00000595081	hADV29S1	A0JD25	119 aa		13.28	□□□□□ -0.28
PNKP-205	ENST00000595081	LINC01547	P58512	204 aa	Predicted RBP	13.28	□□□□□ -0.28
PNKP-205	ENST00000595081	IGLV5-48	A0A075B6I7	105 aa		13.27	□□□□□ -0.29
PNKP-205	ENST00000595081	TEX49	A0A1B0GTD5	131 aa		13.27	□□□□□ -0.29
PNKP-205	ENST00000595081	CTAG1A	P78358	180 aa		13.27	□□□□□ -0.29
PNKP-205	ENST00000595081	C9orf153	Q5TBE3	101 aa		13.27	□□□□□ -0.29
PNKP-205	ENST00000595081		Q6ZQY7	126 aa		13.24	□□□□□ -0.29
PNKP-205	ENST00000595081	LAMTOR3	Q9UHA4	124 aa		13.24	□□□□□ -0.29
PNKP-205	ENST00000595081	TSTD3	H0UI37	97 aa		13.23	□□□□□ -0.29
PNKP-205	ENST00000595081	SSBP3-AS1	Q7Z2R9	100 aa		13.23	□□□□□ -0.29
PNKP-205	ENST00000595081		Q8N377	158 aa		13.23	□□□□□ -0.29
PNKP-205	ENST00000595081	TRIAP1	O43715	76 aa		13.22	□□□□□ -0.29
PNKP-205	ENST00000595081	SMIM29	Q86T20	159 aa		13.22	□□□□□ -0.29
PNKP-205	ENST00000595081	FAM218A	Q96MZ4	157 aa		13.22	□□□□□ -0.29
PNKP-205	ENST00000595081		H0YGX0	51 aa		13.21	□□□□□ -0.29
PNKP-205	ENST00000595081	C4orf48	Q5BLP8	95 aa		13.2	□□□□□ -0.3
PNKP-205	ENST00000595081	SPAG11A	Q6PDA7	123 aa		13.2	□□□□□ -0.3
PNKP-205	ENST00000595081	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	13.18	□□□□□ -0.3
PNKP-205	ENST00000595081		M0R143	59 aa		13.17	□□□□□ -0.3
PNKP-205	ENST00000595081	PSMB2	P49721	201 aa		13.17	□□□□□ -0.3
PNKP-205	ENST00000595081	CLEC2B	Q92478	149 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms