RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 CHCHD1Q96BP2 118 aaKnown RBP5.44□□□□□ -1.54
NOTCH3-202ENST00000595045 VAMP8Q9BV40 100 aa5.44□□□□□ -1.54
NOTCH3-202ENST00000595045 MT1HP80294 61 aa5.43□□□□□ -1.54
NOTCH3-202ENST00000595045 SPAG11AQ6PDA7 123 aa5.43□□□□□ -1.54
NOTCH3-202ENST00000595045 PRYO14603 147 aa5.42□□□□□ -1.54
NOTCH3-202ENST00000595045 HSBP1O75506 76 aa5.42□□□□□ -1.54
NOTCH3-202ENST00000595045 SCGB1D1O95968 90 aa5.42□□□□□ -1.54
NOTCH3-202ENST00000595045 CFC1BP0CG36 223 aa5.42□□□□□ -1.54
NOTCH3-202ENST00000595045 C4orf48Q5BLP8 95 aa5.42□□□□□ -1.54
NOTCH3-202ENST00000595045 NDUFA12Q9UI09 145 aa5.42□□□□□ -1.54
NOTCH3-202ENST00000595045 TRBV10-3A0A0K0K1G6 114 aa5.41□□□□□ -1.54
NOTCH3-202ENST00000595045 ETDCA0A1B0GVM5 59 aa5.41□□□□□ -1.54
NOTCH3-202ENST00000595045 KRTAP4-16G5E9R7 235 aaPredicted RBP5.41□□□□□ -1.54
NOTCH3-202ENST00000595045 HERV-K104P63124 156 aa5.41□□□□□ -1.54
NOTCH3-202ENST00000595045 Q8NBF4 154 aa5.41□□□□□ -1.54
NOTCH3-202ENST00000595045 UQCR10Q9UDW1 63 aa5.41□□□□□ -1.54
NOTCH3-202ENST00000595045 ZNF706Q9Y5V0 76 aaPredicted RBP5.41□□□□□ -1.54
NOTCH3-202ENST00000595045 MYMXA0A1B0GTQ4 84 aa5.4□□□□□ -1.54
NOTCH3-202ENST00000595045 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.4□□□□□ -1.54
NOTCH3-202ENST00000595045 LORP23490 312 aaPredicted RBP5.4□□□□□ -1.54
NOTCH3-202ENST00000595045 PCP4P48539 62 aa5.4□□□□□ -1.54
NOTCH3-202ENST00000595045 TSPEAR-AS2P59090 65 aa5.4□□□□□ -1.54
NOTCH3-202ENST00000595045 GAGE2AQ6NT46 116 aa5.4□□□□□ -1.54
NOTCH3-202ENST00000595045 KCNQ1DNQ9H478 68 aa5.4□□□□□ -1.54
NOTCH3-202ENST00000595045 LEPROTL1O95214 131 aa5.39□□□□□ -1.55
NOTCH3-202ENST00000595045 SPRR1AP35321 89 aa5.39□□□□□ -1.55
NOTCH3-202ENST00000595045 PMCHL2Q9BQD1 86 aa5.39□□□□□ -1.55
NOTCH3-202ENST00000595045 MAP1LC3CQ9BXW4 147 aa5.39□□□□□ -1.55
NOTCH3-202ENST00000595045 IGLV9-49A0A0B4J1Y8 123 aa5.38□□□□□ -1.55
NOTCH3-202ENST00000595045 LEPROTO15243 131 aa5.38□□□□□ -1.55
NOTCH3-202ENST00000595045 ERC2-IT1O76042 136 aa5.38□□□□□ -1.55
NOTCH3-202ENST00000595045 KRTAP10-6P60371 365 aaPredicted RBP5.38□□□□□ -1.55
NOTCH3-202ENST00000595045 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
NOTCH3-202ENST00000595045 XP32Q5T750 250 aa5.38□□□□□ -1.55
NOTCH3-202ENST00000595045 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
NOTCH3-202ENST00000595045 B5MCH6 92 aa5.37□□□□□ -1.55
NOTCH3-202ENST00000595045 SERF1AO75920 110 aa5.37□□□□□ -1.55
NOTCH3-202ENST00000595045 LINC00310P59036 64 aa5.37□□□□□ -1.55
NOTCH3-202ENST00000595045 NPC2P61916 151 aa5.37□□□□□ -1.55
NOTCH3-202ENST00000595045 Q8N377 158 aa5.37□□□□□ -1.55
NOTCH3-202ENST00000595045 J3QQQ9 107 aa5.36□□□□□ -1.55
NOTCH3-202ENST00000595045 SPINK1P00995 79 aa5.36□□□□□ -1.55
NOTCH3-202ENST00000595045 UBE2V1Q13404 147 aa5.36□□□□□ -1.55
NOTCH3-202ENST00000595045 MOBPQ13875 183 aa5.36□□□□□ -1.55
NOTCH3-202ENST00000595045 LGALS3P17931 250 aaKnown RBP5.35□□□□□ -1.55
NOTCH3-202ENST00000595045 S100A7L2Q5SY68 101 aa5.35□□□□□ -1.55
NOTCH3-202ENST00000595045 Q9BRP9 147 aa5.35□□□□□ -1.55
NOTCH3-202ENST00000595045 DPM2O94777 84 aa5.34□□□□□ -1.55
NOTCH3-202ENST00000595045 IGKCP01834 107 aa5.34□□□□□ -1.55
NOTCH3-202ENST00000595045 PLNP26678 52 aa5.34□□□□□ -1.55
NOTCH3-202ENST00000595045 HERVK_113P61574 105 aa5.34□□□□□ -1.55
NOTCH3-202ENST00000595045 SPATA45Q537H7 98 aa5.34□□□□□ -1.55
NOTCH3-202ENST00000595045 HSPB8Q9UJY1 196 aa5.34□□□□□ -1.55
NOTCH3-202ENST00000595045 PAM16Q9Y3D7 125 aa5.34□□□□□ -1.55
NOTCH3-202ENST00000595045 LOC107984156A0A0G2JMH3 177 aa5.33□□□□□ -1.56
NOTCH3-202ENST00000595045 TRBV10-2A0A0K0K1G8 114 aa5.33□□□□□ -1.56
NOTCH3-202ENST00000595045 RPS29P62273 56 aaKnown RBP5.33□□□□□ -1.56
NOTCH3-202ENST00000595045 ARL17AQ8IVW1 177 aa5.33□□□□□ -1.56
NOTCH3-202ENST00000595045 SPANXB1Q9NS25 103 aaPredicted RBP5.33□□□□□ -1.56
NOTCH3-202ENST00000595045 K7ERU9 68 aa5.32□□□□□ -1.56
NOTCH3-202ENST00000595045 EIF4EBP3O60516 100 aaPredicted RBP5.32□□□□□ -1.56
NOTCH3-202ENST00000595045 ADAMTSL4-AS1Q5T5F5 129 aa5.32□□□□□ -1.56
NOTCH3-202ENST00000595045 SOSTDC1Q6X4U4 206 aa5.32□□□□□ -1.56
NOTCH3-202ENST00000595045 Q6ZRX8 168 aa5.32□□□□□ -1.56
NOTCH3-202ENST00000595045 SSBP3-AS1Q7Z2R9 100 aa5.32□□□□□ -1.56
NOTCH3-202ENST00000595045 TRAV23DV6A0A075B6W5 121 aa5.31□□□□□ -1.56
NOTCH3-202ENST00000595045 IGLV6-57P01721 117 aa5.31□□□□□ -1.56
NOTCH3-202ENST00000595045 NMUP48645 174 aa5.31□□□□□ -1.56
NOTCH3-202ENST00000595045 C9orf153Q5TBE3 101 aa5.31□□□□□ -1.56
NOTCH3-202ENST00000595045 ST20-AS1Q8NBB2 130 aa5.31□□□□□ -1.56
NOTCH3-202ENST00000595045 SSPOA2VEC9 5147 aa5.31□□□□□ -1.56
NOTCH3-202ENST00000595045 A0A0J9YXY3 114 aa5.3□□□□□ -1.56
NOTCH3-202ENST00000595045 ZNF73O43830 326 aaPredicted RBP5.3□□□□□ -1.56
NOTCH3-202ENST00000595045 NDUFC2O95298 119 aa5.3□□□□□ -1.56
NOTCH3-202ENST00000595045 C3orf79P0CE67 100 aa5.3□□□□□ -1.56
NOTCH3-202ENST00000595045 KRTDAPP60985 99 aa5.3□□□□□ -1.56
NOTCH3-202ENST00000595045 OR13C6PQ8NH95 151 aa5.29□□□□□ -1.56
NOTCH3-202ENST00000595045 HSBP1L1C9JCN9 74 aa5.28□□□□□ -1.56
NOTCH3-202ENST00000595045 E9PLD3 99 aa5.28□□□□□ -1.56
NOTCH3-202ENST00000595045 M0R2T5 61 aa5.28□□□□□ -1.56
NOTCH3-202ENST00000595045 SLC25A20O43772 301 aa5.28□□□□□ -1.56
NOTCH3-202ENST00000595045 BATFQ16520 125 aa5.28□□□□□ -1.56
NOTCH3-202ENST00000595045 HRCT1Q6UXD1 115 aa5.28□□□□□ -1.56
NOTCH3-202ENST00000595045 USH2AO75445 5202 aa5.28□□□□□ -1.56
NOTCH3-202ENST00000595045 IGLV8-61A0A075B6I0 122 aa5.27□□□□□ -1.57
NOTCH3-202ENST00000595045 HINT1P49773 126 aaPredicted RBP5.27□□□□□ -1.57
NOTCH3-202ENST00000595045 PCOTHQ58A44 107 aa5.27□□□□□ -1.57
NOTCH3-202ENST00000595045 SLC25A34Q6PIV7 304 aa5.27□□□□□ -1.57
NOTCH3-202ENST00000595045 SCGB1A1P11684 91 aa5.26□□□□□ -1.57
NOTCH3-202ENST00000595045 C21orf62-AS1Q17RA5 79 aa5.26□□□□□ -1.57
NOTCH3-202ENST00000595045 GTF2H5Q6ZYL4 71 aa5.26□□□□□ -1.57
NOTCH3-202ENST00000595045 LINC00308Q8TCZ7 52 aa5.26□□□□□ -1.57
NOTCH3-202ENST00000595045 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
NOTCH3-202ENST00000595045 SYS1-DBNDD2H3BUS1 97 aa5.25□□□□□ -1.57
NOTCH3-202ENST00000595045 OCIAD2Q56VL3 154 aa5.25□□□□□ -1.57
NOTCH3-202ENST00000595045 LITAFQ99732 161 aa5.25□□□□□ -1.57
NOTCH3-202ENST00000595045 TTTY13Q9BZ97 58 aa5.25□□□□□ -1.57
NOTCH3-202ENST00000595045 VAMP3Q15836 100 aa5.24□□□□□ -1.57
NOTCH3-202ENST00000595045 VPS25Q9BRG1 176 aa5.24□□□□□ -1.57
NOTCH3-202ENST00000595045 SPANXCQ9NY87 97 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms