RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 A0A1B0GUV1 79 aa8.42□□□□□ -1.06
LIG1-207ENST00000594759 EPM2AB3EWF7 344 aa8.41□□□□□ -1.06
LIG1-207ENST00000594759 IGKV4-1P06312 121 aa8.41□□□□□ -1.06
LIG1-207ENST00000594759 UBR5O95071 2799 aaPredicted RBP8.41□□□□□ -1.06
LIG1-207ENST00000594759 ATP11AUNQ6ZP68 121 aa8.41□□□□□ -1.06
LIG1-207ENST00000594759 C4orf48Q5BLP8 95 aa8.4□□□□□ -1.06
LIG1-207ENST00000594759 CASC2Q6XLA1 102 aa8.4□□□□□ -1.06
LIG1-207ENST00000594759 ITPR2Q14571 2701 aa8.4□□□□□ -1.06
LIG1-207ENST00000594759 SYCNQ0VAF6 134 aa8.39□□□□□ -1.07
LIG1-207ENST00000594759 ZFHX4Q86UP3 3567 aa8.39□□□□□ -1.07
LIG1-207ENST00000594759 H0Y9P7 68 aa8.39□□□□□ -1.07
LIG1-207ENST00000594759 OCR1Q9BZK8 76 aa8.39□□□□□ -1.07
LIG1-207ENST00000594759 DHRS4-AS1Q9P1J3 65 aa8.38□□□□□ -1.07
LIG1-207ENST00000594759 UTP20O75691 2785 aaKnown RBP8.38□□□□□ -1.07
LIG1-207ENST00000594759 Q6ZRP5 223 aa8.38□□□□□ -1.07
LIG1-207ENST00000594759 Q6ZTC4 211 aa8.38□□□□□ -1.07
LIG1-207ENST00000594759 A0A096LNT2 108 aa8.37□□□□□ -1.07
LIG1-207ENST00000594759 CYP4F30PQ9H0H9 118 aa8.37□□□□□ -1.07
LIG1-207ENST00000594759 PSCAO43653 123 aa8.37□□□□□ -1.07
LIG1-207ENST00000594759 ELOF1P60002 83 aaKnown RBP8.35□□□□□ -1.07
LIG1-207ENST00000594759 KIAA0087Q14695 138 aa8.35□□□□□ -1.07
LIG1-207ENST00000594759 STAB1Q9NY15 2570 aa8.35□□□□□ -1.07
LIG1-207ENST00000594759 NOTCH1P46531 2555 aa8.34□□□□□ -1.07
LIG1-207ENST00000594759 IGLV6-57P01721 117 aa8.34□□□□□ -1.07
LIG1-207ENST00000594759 SPART-AS1P0CW21 52 aa8.34□□□□□ -1.07
LIG1-207ENST00000594759 PCOTHQ58A44 107 aa8.34□□□□□ -1.07
LIG1-207ENST00000594759 NBEAL2Q6ZNJ1 2754 aa8.34□□□□□ -1.07
LIG1-207ENST00000594759 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.34□□□□□ -1.07
LIG1-207ENST00000594759 C7orf65Q6ZTY9 151 aa8.34□□□□□ -1.07
LIG1-207ENST00000594759 SPAG11AQ6PDA7 123 aa8.33□□□□□ -1.08
LIG1-207ENST00000594759 COL6A5A8TX70 2615 aa8.33□□□□□ -1.08
LIG1-207ENST00000594759 RPL37AP8A6NKH3 93 aa8.33□□□□□ -1.08
LIG1-207ENST00000594759 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
LIG1-207ENST00000594759 SETXQ7Z333 2677 aaKnown RBP8.32□□□□□ -1.08
LIG1-207ENST00000594759 DCHS2Q6V1P9 2916 aa8.32□□□□□ -1.08
LIG1-207ENST00000594759 NBEAL1Q6ZS30 2694 aa8.32□□□□□ -1.08
LIG1-207ENST00000594759 FSHBP01225 129 aa8.31□□□□□ -1.08
LIG1-207ENST00000594759 EGFEM1PQ0D2K5 195 aa8.31□□□□□ -1.08
LIG1-207ENST00000594759 OXLD1Q5BKU9 147 aa8.31□□□□□ -1.08
LIG1-207ENST00000594759 LCA10Q71F78 164 aa8.31□□□□□ -1.08
LIG1-207ENST00000594759 UBE2DNLQ8IWF7 75 aa8.31□□□□□ -1.08
LIG1-207ENST00000594759 A0A1B0GW54 56 aa8.29□□□□□ -1.08
LIG1-207ENST00000594759 A0A096LNI7 61 aa8.29□□□□□ -1.08
LIG1-207ENST00000594759 CR1P17927 2039 aa8.28□□□□□ -1.08
LIG1-207ENST00000594759 A0A087WSZ3 146 aa8.28□□□□□ -1.08
LIG1-207ENST00000594759 K7EQZ3 153 aa8.28□□□□□ -1.08
LIG1-207ENST00000594759 LOC101927531A0A1B0GV80 90 aa8.28□□□□□ -1.08
LIG1-207ENST00000594759 NF1P21359 2839 aa8.28□□□□□ -1.08
LIG1-207ENST00000594759 Q8NBF4 154 aa8.27□□□□□ -1.08
LIG1-207ENST00000594759 LELP1Q5T871 98 aa8.27□□□□□ -1.09
LIG1-207ENST00000594759 IGLV1-51P01701 117 aa8.27□□□□□ -1.09
LIG1-207ENST00000594759 ST20-AS1Q8NBB2 130 aa8.27□□□□□ -1.09
LIG1-207ENST00000594759 C6orf48Q9UBA6 75 aa8.26□□□□□ -1.09
LIG1-207ENST00000594759 IGHV4-30-4P0DP06 118 aa8.26□□□□□ -1.09
LIG1-207ENST00000594759 HRNRQ86YZ3 2850 aaPredicted RBP8.26□□□□□ -1.09
LIG1-207ENST00000594759 MDFIQ99750 246 aa8.25□□□□□ -1.09
LIG1-207ENST00000594759 CELSR2Q9HCU4 2923 aa8.25□□□□□ -1.09
LIG1-207ENST00000594759 LINC00588Q9Y4M8 146 aa8.24□□□□□ -1.09
LIG1-207ENST00000594759 H3BPC8 53 aa8.24□□□□□ -1.09
LIG1-207ENST00000594759 COA5Q86WW8 74 aa8.24□□□□□ -1.09
LIG1-207ENST00000594759 C16orf90A8MZG2 172 aa8.23□□□□□ -1.09
LIG1-207ENST00000594759 H3BS24 57 aa8.22□□□□□ -1.09
LIG1-207ENST00000594759 Q5VV11 94 aa8.22□□□□□ -1.09
LIG1-207ENST00000594759 LINC00528Q8N1L1 170 aa8.22□□□□□ -1.09
LIG1-207ENST00000594759 CDC42SE1Q9NRR8 79 aa8.21□□□□□ -1.09
LIG1-207ENST00000594759 VPREB1P12018 145 aa8.2□□□□□ -1.1
LIG1-207ENST00000594759 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
LIG1-207ENST00000594759 APCP25054 2843 aa8.19□□□□□ -1.1
LIG1-207ENST00000594759 FBN2P35556 2912 aa8.18□□□□□ -1.1
LIG1-207ENST00000594759 C8orf87E5RJ46 101 aa8.18□□□□□ -1.1
LIG1-207ENST00000594759 C11orf45Q8TAV5 145 aa8.18□□□□□ -1.1
LIG1-207ENST00000594759 C7orf33Q8WU49 177 aa8.17□□□□□ -1.1
LIG1-207ENST00000594759 RPL37AP61513 92 aaKnown RBP8.16□□□□□ -1.1
LIG1-207ENST00000594759 Q8N377 158 aa8.16□□□□□ -1.1
LIG1-207ENST00000594759 DEFB131BA0A096LNP1 70 aa8.15□□□□□ -1.1
LIG1-207ENST00000594759 IGKV2-24A0A0C4DH68 120 aa8.15□□□□□ -1.1
LIG1-207ENST00000594759 SPANXA2-OT1Q8N9U9 137 aa8.14□□□□□ -1.11
LIG1-207ENST00000594759 GVQW2A0A096LPI5 108 aaPredicted RBP8.14□□□□□ -1.11
LIG1-207ENST00000594759 A0A1W2PNM2 257 aa8.14□□□□□ -1.11
LIG1-207ENST00000594759 Q8NDZ9 215 aa8.14□□□□□ -1.11
LIG1-207ENST00000594759 SMG1Q96Q15 3661 aaKnown RBP8.13□□□□□ -1.11
LIG1-207ENST00000594759 Q75L30 129 aa8.13□□□□□ -1.11
LIG1-207ENST00000594759 LINC00476Q8WZB0 136 aa8.13□□□□□ -1.11
LIG1-207ENST00000594759 Q6ZRX8 168 aa8.12□□□□□ -1.11
LIG1-207ENST00000594759 KRTAP1-3Q8IUG1 177 aa8.11□□□□□ -1.11
LIG1-207ENST00000594759 NSD1Q96L73 2696 aaPredicted RBP8.1□□□□□ -1.11
LIG1-207ENST00000594759 BAHCC1Q9P281 2608 aa8.1□□□□□ -1.11
LIG1-207ENST00000594759 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
LIG1-207ENST00000594759 Q9BRP9 147 aa8.1□□□□□ -1.11
LIG1-207ENST00000594759 REG3GQ6UW15 175 aa8.09□□□□□ -1.11
LIG1-207ENST00000594759 NIPBLQ6KC79 2804 aaeCLIP8.09□□□□□ -1.11
LIG1-207ENST00000594759 A8MU10 97 aa8.09□□□□□ -1.11
LIG1-207ENST00000594759 DSCR10P59022 87 aa8.09□□□□□ -1.11
LIG1-207ENST00000594759 PHF5AQ7RTV0 110 aaKnown RBP8.09□□□□□ -1.12
LIG1-207ENST00000594759 GIG44P09565 113 aaPredicted RBP8.08□□□□□ -1.12
LIG1-207ENST00000594759 IGLV5-48A0A075B6I7 105 aa8.08□□□□□ -1.12
LIG1-207ENST00000594759 LINC00612Q8N6U2 182 aa8.08□□□□□ -1.12
LIG1-207ENST00000594759 KCNQ1DNQ9H478 68 aa8.08□□□□□ -1.12
LIG1-207ENST00000594759 CSMD1Q96PZ7 3565 aa8.07□□□□□ -1.12
LIG1-207ENST00000594759 A0A1B0GU69 56 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms