RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 M0R2N4 97 aa10.34□□□□□ -0.75
PNKP-204ENST00000594661 CD164Q04900 197 aa10.34□□□□□ -0.75
PNKP-204ENST00000594661 LELP1Q5T871 98 aa10.34□□□□□ -0.75
PNKP-204ENST00000594661 MGAM2Q2M2H8 2515 aa10.34□□□□□ -0.75
PNKP-204ENST00000594661 PRYO14603 147 aa10.33□□□□□ -0.76
PNKP-204ENST00000594661 FUSP35637 526 aaKnown RBP eCLIP10.33□□□□□ -0.76
PNKP-204ENST00000594661 REG3AQ06141 175 aa10.33□□□□□ -0.76
PNKP-204ENST00000594661 KPRPQ5T749 579 aaPredicted RBP10.33□□□□□ -0.76
PNKP-204ENST00000594661 IGLV10-54A0A075B6I4 117 aa10.33□□□□□ -0.76
PNKP-204ENST00000594661 PDE6GP18545 87 aa10.33□□□□□ -0.76
PNKP-204ENST00000594661 C11orf45Q8TAV5 145 aa10.32□□□□□ -0.76
PNKP-204ENST00000594661 CHCHD10Q8WYQ3 142 aaPredicted RBP10.32□□□□□ -0.76
PNKP-204ENST00000594661 CD164L2Q6UWJ8 174 aa10.31□□□□□ -0.76
PNKP-204ENST00000594661 Q8IZM0 81 aa10.31□□□□□ -0.76
PNKP-204ENST00000594661 H3BNG1 76 aa10.31□□□□□ -0.76
PNKP-204ENST00000594661 BPY2O14599 106 aa10.3□□□□□ -0.76
PNKP-204ENST00000594661 Q1T7F1 81 aa10.3□□□□□ -0.76
PNKP-204ENST00000594661 DEFB131BA0A096LNP1 70 aa10.29□□□□□ -0.76
PNKP-204ENST00000594661 LINC00575Q6W349 94 aa10.28□□□□□ -0.76
PNKP-204ENST00000594661 hDV103S1A0JD37 113 aa10.27□□□□□ -0.77
PNKP-204ENST00000594661 OCR1Q9BZK8 76 aa10.27□□□□□ -0.77
PNKP-204ENST00000594661 WFDC10BQ8IUB3 73 aa10.25□□□□□ -0.77
PNKP-204ENST00000594661 KLK12Q9UKR0 248 aa10.25□□□□□ -0.77
PNKP-204ENST00000594661 KIAA0087Q14695 138 aa10.25□□□□□ -0.77
PNKP-204ENST00000594661 H3BQ85 93 aa10.24□□□□□ -0.77
PNKP-204ENST00000594661 Q6ZRP5 223 aa10.24□□□□□ -0.77
PNKP-204ENST00000594661 C6orf99Q4VX62 202 aa10.23□□□□□ -0.77
PNKP-204ENST00000594661 MUC7Q8TAX7 377 aa10.23□□□□□ -0.77
PNKP-204ENST00000594661 PRR34Q9NV39 138 aa10.23□□□□□ -0.77
PNKP-204ENST00000594661 DNAH9Q9NYC9 4486 aa10.23□□□□□ -0.77
PNKP-204ENST00000594661 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
PNKP-204ENST00000594661 SCXQ7RTU7 201 aa10.22□□□□□ -0.77
PNKP-204ENST00000594661 COL7A1Q02388 2944 aa10.2□□□□□ -0.78
PNKP-204ENST00000594661 COX17Q14061 63 aa10.19□□□□□ -0.78
PNKP-204ENST00000594661 C9orf116Q5BN46 136 aaPredicted RBP10.19□□□□□ -0.78
PNKP-204ENST00000594661 SPAG11BQ08648 103 aa10.18□□□□□ -0.78
PNKP-204ENST00000594661 IGKV4-1P06312 121 aa10.18□□□□□ -0.78
PNKP-204ENST00000594661 HIGD2AQ9BW72 106 aa10.18□□□□□ -0.78
PNKP-204ENST00000594661 UNQ6190/PRO20217Q6UXQ8 127 aa10.16□□□□□ -0.78
PNKP-204ENST00000594661 C10orf25Q5T742 122 aa10.15□□□□□ -0.78
PNKP-204ENST00000594661 LCE6AA0A183 80 aa10.14□□□□□ -0.79
PNKP-204ENST00000594661 C1orf64Q8NEQ6 169 aa10.14□□□□□ -0.79
PNKP-204ENST00000594661 DNHD1Q96M86 4753 aa10.13□□□□□ -0.79
PNKP-204ENST00000594661 LINC01556Q5JQF7 62 aa10.13□□□□□ -0.79
PNKP-204ENST00000594661 Q6ZQY7 126 aa10.13□□□□□ -0.79
PNKP-204ENST00000594661 TRAV22A0A0B4J277 110 aa10.13□□□□□ -0.79
PNKP-204ENST00000594661 MRPL55Q7Z7F7 128 aaKnown RBP10.12□□□□□ -0.79
PNKP-204ENST00000594661 B9D2Q9BPU9 175 aa10.12□□□□□ -0.79
PNKP-204ENST00000594661 LINC00588Q9Y4M8 146 aa10.12□□□□□ -0.79
PNKP-204ENST00000594661 STAB2Q8WWQ8 2551 aa10.11□□□□□ -0.79
PNKP-204ENST00000594661 KRTAP26-1Q6PEX3 210 aa10.11□□□□□ -0.79
PNKP-204ENST00000594661 Q8NDZ9 215 aa10.11□□□□□ -0.79
PNKP-204ENST00000594661 PSPHP1O15172 72 aa10.1□□□□□ -0.79
PNKP-204ENST00000594661 LRCOL1A6NCL2 159 aa10.09□□□□□ -0.79
PNKP-204ENST00000594661 COX7BP24311 80 aa10.09□□□□□ -0.79
PNKP-204ENST00000594661 Q8N9L7 120 aa10.09□□□□□ -0.79
PNKP-204ENST00000594661 DNAH10OSP0CZ25 163 aa10.09□□□□□ -0.79
PNKP-204ENST00000594661 KTN1-AS1Q86SY8 53 aa10.08□□□□□ -0.8
PNKP-204ENST00000594661 DNAH1Q9P2D7 4330 aa10.08□□□□□ -0.8
PNKP-204ENST00000594661 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.07□□□□□ -0.8
PNKP-204ENST00000594661 ZCCHC13Q8WW36 166 aaKnown RBP10.07□□□□□ -0.8
PNKP-204ENST00000594661 IGLV6-57P01721 117 aa10.07□□□□□ -0.8
PNKP-204ENST00000594661 HIGD2BQ4VC39 106 aa10.07□□□□□ -0.8
PNKP-204ENST00000594661 CYP4F30PQ9H0H9 118 aa10.07□□□□□ -0.8
PNKP-204ENST00000594661 C6orf48Q9UBA6 75 aa10.07□□□□□ -0.8
PNKP-204ENST00000594661 LYSTQ99698 3801 aa10.07□□□□□ -0.8
PNKP-204ENST00000594661 GVQW2A0A096LPI5 108 aaPredicted RBP10.06□□□□□ -0.8
PNKP-204ENST00000594661 SYCNQ0VAF6 134 aa10.06□□□□□ -0.8
PNKP-204ENST00000594661 DYNC2H1Q8NCM8 4307 aaKnown RBP10.06□□□□□ -0.8
PNKP-204ENST00000594661 UBE2BP63146 152 aa10.06□□□□□ -0.8
PNKP-204ENST00000594661 RBM12B-AS1Q9P1G2 102 aa10.06□□□□□ -0.8
PNKP-204ENST00000594661 PRKDCP78527 4128 aaKnown RBP10.05□□□□□ -0.8
PNKP-204ENST00000594661 IGKV2D-24A0A075B6R9 120 aa10.04□□□□□ -0.8
PNKP-204ENST00000594661 PSCAO43653 123 aa10.04□□□□□ -0.8
PNKP-204ENST00000594661 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
PNKP-204ENST00000594661 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
PNKP-204ENST00000594661 KRTAP21-3Q3LHN1 58 aa10.02□□□□□ -0.81
PNKP-204ENST00000594661 CSMD3Q7Z407 3707 aa10.02□□□□□ -0.81
PNKP-204ENST00000594661 A8MUN3 132 aa10.01□□□□□ -0.81
PNKP-204ENST00000594661 XAGE1AQ9HD64 81 aa10.01□□□□□ -0.81
PNKP-204ENST00000594661 Q5VV11 94 aa10□□□□□ -0.81
PNKP-204ENST00000594661 MEGF8Q7Z7M0 2845 aa10□□□□□ -0.81
PNKP-204ENST00000594661 A8MU10 97 aa9.99□□□□□ -0.81
PNKP-204ENST00000594661 FAM30AQ9NZY2 134 aa9.99□□□□□ -0.81
PNKP-204ENST00000594661 SMIM29Q86T20 159 aa9.98□□□□□ -0.81
PNKP-204ENST00000594661 DIRC1Q969H9 104 aa9.98□□□□□ -0.81
PNKP-204ENST00000594661 PLECQ15149 4684 aaKnown RBP9.98□□□□□ -0.81
PNKP-204ENST00000594661 M0R378 163 aa9.97□□□□□ -0.81
PNKP-204ENST00000594661 UBE2AP49459 152 aa9.97□□□□□ -0.81
PNKP-204ENST00000594661 APLNQ9ULZ1 77 aa9.97□□□□□ -0.81
PNKP-204ENST00000594661 DNAH7Q8WXX0 4024 aa9.97□□□□□ -0.81
PNKP-204ENST00000594661 CASC10Q5T4H9 136 aa9.96□□□□□ -0.82
PNKP-204ENST00000594661 NDUFS5O43920 106 aa9.95□□□□□ -0.82
PNKP-204ENST00000594661 ELOF1P60002 83 aaKnown RBP9.95□□□□□ -0.82
PNKP-204ENST00000594661 C16orf90A8MZG2 172 aa9.94□□□□□ -0.82
PNKP-204ENST00000594661 DNAH10Q8IVF4 4471 aa9.93□□□□□ -0.82
PNKP-204ENST00000594661 PHF5AQ7RTV0 110 aaKnown RBP9.92□□□□□ -0.82
PNKP-204ENST00000594661 KRTAP1-5Q9BYS1 174 aa9.92□□□□□ -0.82
PNKP-204ENST00000594661 STARD9Q9P2P6 4700 aa9.92□□□□□ -0.82
PNKP-204ENST00000594661 ZNF73O43830 326 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms