RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SPANXCQ9NY87 97 aa10.15□□□□□ -0.78
IRF3-208ENST00000594387 S100A2P29034 98 aa10.14□□□□□ -0.79
IRF3-208ENST00000594387 CTAG1AP78358 180 aa10.14□□□□□ -0.79
IRF3-208ENST00000594387 SOSTDC1Q6X4U4 206 aa10.14□□□□□ -0.79
IRF3-208ENST00000594387 SPAG11AQ6PDA7 123 aa10.13□□□□□ -0.79
IRF3-208ENST00000594387 PPDPFQ9H3Y8 114 aa10.13□□□□□ -0.79
IRF3-208ENST00000594387 GAGE2AQ6NT46 116 aa10.12□□□□□ -0.79
IRF3-208ENST00000594387 Q6ZRX8 168 aa10.12□□□□□ -0.79
IRF3-208ENST00000594387 LINC00518Q8N0U6 118 aa10.12□□□□□ -0.79
IRF3-208ENST00000594387 C3orf22Q8N5N4 141 aa10.12□□□□□ -0.79
IRF3-208ENST00000594387 ZNF73O43830 326 aaPredicted RBP10.11□□□□□ -0.79
IRF3-208ENST00000594387 S100A6P06703 90 aa10.11□□□□□ -0.79
IRF3-208ENST00000594387 LITAFQ99732 161 aa10.11□□□□□ -0.79
IRF3-208ENST00000594387 SNRPEP62304 92 aaKnown RBP10.1□□□□□ -0.79
IRF3-208ENST00000594387 ATOH7Q8N100 152 aa10.1□□□□□ -0.79
IRF3-208ENST00000594387 TTTY13Q9BZ97 58 aa10.1□□□□□ -0.79
IRF3-208ENST00000594387 EIF4EBP3O60516 100 aaPredicted RBP10.09□□□□□ -0.79
IRF3-208ENST00000594387 SPANXDQ9BXN6 97 aa10.08□□□□□ -0.8
IRF3-208ENST00000594387 UBR4Q5T4S7 5183 aa10.07□□□□□ -0.8
IRF3-208ENST00000594387 ANKRD39Q53RE8 183 aa10.07□□□□□ -0.8
IRF3-208ENST00000594387 HSBP1L1C9JCN9 74 aa10.06□□□□□ -0.8
IRF3-208ENST00000594387 IFITM1P13164 125 aa10.06□□□□□ -0.8
IRF3-208ENST00000594387 LINC00483Q53H64 154 aa10.06□□□□□ -0.8
IRF3-208ENST00000594387 Q6ZVH6 145 aa10.06□□□□□ -0.8
IRF3-208ENST00000594387 Q9BRP9 147 aa10.06□□□□□ -0.8
IRF3-208ENST00000594387 ERC2-IT1O76042 136 aa10.05□□□□□ -0.8
IRF3-208ENST00000594387 IGLV9-49A0A0B4J1Y8 123 aa10.04□□□□□ -0.8
IRF3-208ENST00000594387 HIST3H2BBQ8N257 126 aa10.04□□□□□ -0.8
IRF3-208ENST00000594387 Q8NBF4 154 aa10.04□□□□□ -0.8
IRF3-208ENST00000594387 RETNLBQ9BQ08 111 aa10.04□□□□□ -0.8
IRF3-208ENST00000594387 C5orf52A6NGY3 159 aa10.03□□□□□ -0.8
IRF3-208ENST00000594387 SSBP3-AS1Q7Z2R9 100 aa10.03□□□□□ -0.8
IRF3-208ENST00000594387 HIST1H2BLQ99880 126 aa10.03□□□□□ -0.8
IRF3-208ENST00000594387 DHRS4-AS1Q9P1J3 65 aa10.02□□□□□ -0.81
IRF3-208ENST00000594387 PCP2Q8IVA1 136 aa10.01□□□□□ -0.81
IRF3-208ENST00000594387 LRP2P98164 4655 aa10□□□□□ -0.81
IRF3-208ENST00000594387 A6NDN8 102 aa10□□□□□ -0.81
IRF3-208ENST00000594387 SPINK1P00995 79 aa10□□□□□ -0.81
IRF3-208ENST00000594387 MOBPQ13875 183 aa10□□□□□ -0.81
IRF3-208ENST00000594387 SLC25A34Q6PIV7 304 aa10□□□□□ -0.81
IRF3-208ENST00000594387 COX7BP24311 80 aa9.99□□□□□ -0.81
IRF3-208ENST00000594387 C9orf153Q5TBE3 101 aa9.99□□□□□ -0.81
IRF3-208ENST00000594387 MUSTN1Q8IVN3 82 aa9.99□□□□□ -0.81
IRF3-208ENST00000594387 IGLV7-46A0A075B6I9 117 aa9.98□□□□□ -0.81
IRF3-208ENST00000594387 C6orf99Q4VX62 202 aa9.98□□□□□ -0.81
IRF3-208ENST00000594387 SCGB1D1O95968 90 aa9.96□□□□□ -0.82
IRF3-208ENST00000594387 CDIP1Q9H305 208 aa9.96□□□□□ -0.82
IRF3-208ENST00000594387 ELOF1P60002 83 aaKnown RBP9.95□□□□□ -0.82
IRF3-208ENST00000594387 ST20-AS1Q8NBB2 130 aa9.95□□□□□ -0.82
IRF3-208ENST00000594387 TRAV13-2A0A0B4J235 113 aa9.94□□□□□ -0.82
IRF3-208ENST00000594387 TRBV7-6A0A0J9YX20 115 aa9.94□□□□□ -0.82
IRF3-208ENST00000594387 TAL2Q16559 108 aa9.94□□□□□ -0.82
IRF3-208ENST00000594387 FP248Q71RG6 208 aaPredicted RBP9.94□□□□□ -0.82
IRF3-208ENST00000594387 LAMTOR3Q9UHA4 124 aa9.94□□□□□ -0.82
IRF3-208ENST00000594387 A0A1B0GWB2 263 aa9.93□□□□□ -0.82
IRF3-208ENST00000594387 TPRXLQ17RH7 258 aa9.92□□□□□ -0.82
IRF3-208ENST00000594387 A4D1N5 150 aa9.91□□□□□ -0.82
IRF3-208ENST00000594387 RPS29P62273 56 aaKnown RBP9.91□□□□□ -0.82
IRF3-208ENST00000594387 DEFB105AQ8NG35 78 aa9.9□□□□□ -0.82
IRF3-208ENST00000594387 LPAP08519 4548 aa9.89□□□□□ -0.83
IRF3-208ENST00000594387 SLC25A20O43772 301 aa9.89□□□□□ -0.83
IRF3-208ENST00000594387 SPRR1BP22528 89 aa9.89□□□□□ -0.83
IRF3-208ENST00000594387 VAMP3Q15836 100 aa9.89□□□□□ -0.83
IRF3-208ENST00000594387 NHP2Q9NX24 153 aaKnown RBP9.89□□□□□ -0.83
IRF3-208ENST00000594387 TEX49A0A1B0GTD5 131 aa9.87□□□□□ -0.83
IRF3-208ENST00000594387 SMIM11BQ8TCY0 68 aa9.85□□□□□ -0.83
IRF3-208ENST00000594387 HIST1H4GQ99525 98 aa9.84□□□□□ -0.83
IRF3-208ENST00000594387 A0A0U1RQV1 116 aa9.83□□□□□ -0.84
IRF3-208ENST00000594387 Q1RN00 199 aa9.83□□□□□ -0.84
IRF3-208ENST00000594387 Q8N377 158 aa9.83□□□□□ -0.84
IRF3-208ENST00000594387 LIMD2Q9BT23 127 aa9.83□□□□□ -0.84
IRF3-208ENST00000594387 COX8AP10176 69 aa9.81□□□□□ -0.84
IRF3-208ENST00000594387 PRO1933Q9H354 126 aa9.81□□□□□ -0.84
IRF3-208ENST00000594387 HRCT1Q6UXD1 115 aa9.8□□□□□ -0.84
IRF3-208ENST00000594387 RNF213Q63HN8 5207 aa9.8□□□□□ -0.84
IRF3-208ENST00000594387 DLEU1O43261 78 aa9.78□□□□□ -0.84
IRF3-208ENST00000594387 IGLV5-48A0A075B6I7 105 aa9.76□□□□□ -0.85
IRF3-208ENST00000594387 H7C2G1 150 aa9.76□□□□□ -0.85
IRF3-208ENST00000594387 CD164Q04900 197 aa9.76□□□□□ -0.85
IRF3-208ENST00000594387 SPATA45Q537H7 98 aa9.76□□□□□ -0.85
IRF3-208ENST00000594387 VAMP8Q9BV40 100 aa9.76□□□□□ -0.85
IRF3-208ENST00000594387 PAM16Q9Y3D7 125 aa9.76□□□□□ -0.85
IRF3-208ENST00000594387 F8WEM9 126 aa9.75□□□□□ -0.85
IRF3-208ENST00000594387 KRTAP13-3Q3SY46 172 aa9.75□□□□□ -0.85
IRF3-208ENST00000594387 C14orf144Q96I85 54 aa9.75□□□□□ -0.85
IRF3-208ENST00000594387 hADV29S1A0JD25 119 aa9.74□□□□□ -0.85
IRF3-208ENST00000594387 BVES-AS1Q5T3Y7 98 aa9.74□□□□□ -0.85
IRF3-208ENST00000594387 LINC00575Q6W349 94 aa9.74□□□□□ -0.85
IRF3-208ENST00000594387 C12orf57Q99622 126 aa9.74□□□□□ -0.85
IRF3-208ENST00000594387 SNCGO76070 127 aa9.73□□□□□ -0.85
IRF3-208ENST00000594387 RAB37Q96AX2 223 aa9.73□□□□□ -0.85
IRF3-208ENST00000594387 SMIM29Q86T20 159 aa9.72□□□□□ -0.85
IRF3-208ENST00000594387 HIGD1BQ9P298 99 aa9.72□□□□□ -0.85
IRF3-208ENST00000594387 LINC01547P58512 204 aaPredicted RBP9.71□□□□□ -0.86
IRF3-208ENST00000594387 SEC61BP60468 96 aaKnown RBP9.69□□□□□ -0.86
IRF3-208ENST00000594387 Q6ZQY7 126 aa9.69□□□□□ -0.86
IRF3-208ENST00000594387 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.67□□□□□ -0.86
IRF3-208ENST00000594387 TMEM238LA0A1B0GVL6 79 aa9.66□□□□□ -0.86
IRF3-208ENST00000594387 A6NJY4 79 aa9.66□□□□□ -0.86
IRF3-208ENST00000594387 CFC1BP0CG36 223 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms