RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 B5MCH6 92 aa11.75□□□□□ -0.53
COPE-204ENST00000593827 LINC00308Q8TCZ7 52 aa11.75□□□□□ -0.53
COPE-204ENST00000593827 SOSTDC1Q6X4U4 206 aa11.74□□□□□ -0.53
COPE-204ENST00000593827 SCGB1D4Q6XE38 83 aa11.74□□□□□ -0.53
COPE-204ENST00000593827 S100A2P29034 98 aa11.73□□□□□ -0.53
COPE-204ENST00000593827 SNRPEP62304 92 aaKnown RBP11.73□□□□□ -0.53
COPE-204ENST00000593827 LITAFQ99732 161 aa11.73□□□□□ -0.53
COPE-204ENST00000593827 SPAG11AQ6PDA7 123 aa11.72□□□□□ -0.53
COPE-204ENST00000593827 Q6ZRX8 168 aa11.72□□□□□ -0.53
COPE-204ENST00000593827 LINC00518Q8N0U6 118 aa11.72□□□□□ -0.53
COPE-204ENST00000593827 ZNF73O43830 326 aaPredicted RBP11.71□□□□□ -0.53
COPE-204ENST00000593827 C4orf48Q5BLP8 95 aa11.7□□□□□ -0.54
COPE-204ENST00000593827 OR13C6PQ8NH95 151 aa11.7□□□□□ -0.54
COPE-204ENST00000593827 S100A6P06703 90 aa11.69□□□□□ -0.54
COPE-204ENST00000593827 SPANXDQ9BXN6 97 aa11.69□□□□□ -0.54
COPE-204ENST00000593827 EIF4EBP3O60516 100 aaPredicted RBP11.68□□□□□ -0.54
COPE-204ENST00000593827 Q6ZVH6 145 aa11.68□□□□□ -0.54
COPE-204ENST00000593827 C3orf22Q8N5N4 141 aa11.68□□□□□ -0.54
COPE-204ENST00000593827 LINC00483Q53H64 154 aa11.67□□□□□ -0.54
COPE-204ENST00000593827 TTTY13Q9BZ97 58 aa11.67□□□□□ -0.54
COPE-204ENST00000593827 IFITM1P13164 125 aa11.66□□□□□ -0.54
COPE-204ENST00000593827 GAGE2AQ6NT46 116 aa11.66□□□□□ -0.54
COPE-204ENST00000593827 ATOH7Q8N100 152 aa11.66□□□□□ -0.54
COPE-204ENST00000593827 PPDPFQ9H3Y8 114 aa11.66□□□□□ -0.54
COPE-204ENST00000593827 C5orf52A6NGY3 159 aa11.65□□□□□ -0.54
COPE-204ENST00000593827 HSBP1L1C9JCN9 74 aa11.65□□□□□ -0.54
COPE-204ENST00000593827 ANKRD39Q53RE8 183 aa11.65□□□□□ -0.54
COPE-204ENST00000593827 HIST3H2BBQ8N257 126 aa11.65□□□□□ -0.54
COPE-204ENST00000593827 Q9BRP9 147 aa11.64□□□□□ -0.55
COPE-204ENST00000593827 HIST1H2BLQ99880 126 aa11.63□□□□□ -0.55
COPE-204ENST00000593827 ERC2-IT1O76042 136 aa11.61□□□□□ -0.55
COPE-204ENST00000593827 DHRS4-AS1Q9P1J3 65 aa11.61□□□□□ -0.55
COPE-204ENST00000593827 SSBP3-AS1Q7Z2R9 100 aa11.6□□□□□ -0.55
COPE-204ENST00000593827 Q8NBF4 154 aa11.59□□□□□ -0.55
COPE-204ENST00000593827 SPINK1P00995 79 aa11.58□□□□□ -0.56
COPE-204ENST00000593827 SLC25A34Q6PIV7 304 aa11.58□□□□□ -0.56
COPE-204ENST00000593827 PCP2Q8IVA1 136 aa11.58□□□□□ -0.56
COPE-204ENST00000593827 IGLV9-49A0A0B4J1Y8 123 aa11.57□□□□□ -0.56
COPE-204ENST00000593827 COX7BP24311 80 aa11.55□□□□□ -0.56
COPE-204ENST00000593827 MOBPQ13875 183 aa11.55□□□□□ -0.56
COPE-204ENST00000593827 TRBV7-6A0A0J9YX20 115 aa11.54□□□□□ -0.56
COPE-204ENST00000593827 A6NDN8 102 aa11.54□□□□□ -0.56
COPE-204ENST00000593827 MUSTN1Q8IVN3 82 aa11.54□□□□□ -0.56
COPE-204ENST00000593827 RETNLBQ9BQ08 111 aa11.54□□□□□ -0.56
COPE-204ENST00000593827 LPAP08519 4548 aa11.54□□□□□ -0.56
COPE-204ENST00000593827 TRAV13-2A0A0B4J235 113 aa11.53□□□□□ -0.56
COPE-204ENST00000593827 ELOF1P60002 83 aaKnown RBP11.53□□□□□ -0.56
COPE-204ENST00000593827 C6orf99Q4VX62 202 aa11.53□□□□□ -0.56
COPE-204ENST00000593827 IGLV7-46A0A075B6I9 117 aa11.52□□□□□ -0.57
COPE-204ENST00000593827 FP248Q71RG6 208 aaPredicted RBP11.52□□□□□ -0.57
COPE-204ENST00000593827 RPS29P62273 56 aaKnown RBP11.51□□□□□ -0.57
COPE-204ENST00000593827 C9orf153Q5TBE3 101 aa11.51□□□□□ -0.57
COPE-204ENST00000593827 A0A1B0GWB2 263 aa11.5□□□□□ -0.57
COPE-204ENST00000593827 SCGB1D1O95968 90 aa11.5□□□□□ -0.57
COPE-204ENST00000593827 TPRXLQ17RH7 258 aa11.5□□□□□ -0.57
COPE-204ENST00000593827 A4D1N5 150 aa11.49□□□□□ -0.57
COPE-204ENST00000593827 ST20-AS1Q8NBB2 130 aa11.49□□□□□ -0.57
COPE-204ENST00000593827 LAMTOR3Q9UHA4 124 aa11.48□□□□□ -0.57
COPE-204ENST00000593827 SPRR1BP22528 89 aa11.47□□□□□ -0.57
COPE-204ENST00000593827 CDIP1Q9H305 208 aa11.47□□□□□ -0.57
COPE-204ENST00000593827 TAL2Q16559 108 aa11.46□□□□□ -0.57
COPE-204ENST00000593827 NHP2Q9NX24 153 aaKnown RBP11.46□□□□□ -0.57
COPE-204ENST00000593827 SLC25A20O43772 301 aa11.43□□□□□ -0.58
COPE-204ENST00000593827 VAMP3Q15836 100 aa11.43□□□□□ -0.58
COPE-204ENST00000593827 TEX49A0A1B0GTD5 131 aa11.42□□□□□ -0.58
COPE-204ENST00000593827 DEFB105AQ8NG35 78 aa11.39□□□□□ -0.59
COPE-204ENST00000593827 SMIM11BQ8TCY0 68 aa11.39□□□□□ -0.59
COPE-204ENST00000593827 HIST1H4GQ99525 98 aa11.39□□□□□ -0.59
COPE-204ENST00000593827 COX8AP10176 69 aa11.38□□□□□ -0.59
COPE-204ENST00000593827 Q8N377 158 aa11.37□□□□□ -0.59
COPE-204ENST00000593827 LIMD2Q9BT23 127 aa11.37□□□□□ -0.59
COPE-204ENST00000593827 A0A0U1RQV1 116 aa11.36□□□□□ -0.59
COPE-204ENST00000593827 DLEU1O43261 78 aa11.36□□□□□ -0.59
COPE-204ENST00000593827 PRO1933Q9H354 126 aa11.35□□□□□ -0.59
COPE-204ENST00000593827 IGLV5-48A0A075B6I7 105 aa11.33□□□□□ -0.6
COPE-204ENST00000593827 Q1RN00 199 aa11.33□□□□□ -0.6
COPE-204ENST00000593827 CD164Q04900 197 aa11.31□□□□□ -0.6
COPE-204ENST00000593827 VAMP8Q9BV40 100 aa11.31□□□□□ -0.6
COPE-204ENST00000593827 SPATA45Q537H7 98 aa11.29□□□□□ -0.6
COPE-204ENST00000593827 BVES-AS1Q5T3Y7 98 aa11.29□□□□□ -0.6
COPE-204ENST00000593827 PAM16Q9Y3D7 125 aa11.29□□□□□ -0.6
COPE-204ENST00000593827 H7C2G1 150 aa11.28□□□□□ -0.6
COPE-204ENST00000593827 KRTAP13-3Q3SY46 172 aa11.28□□□□□ -0.6
COPE-204ENST00000593827 LINC00575Q6W349 94 aa11.28□□□□□ -0.6
COPE-204ENST00000593827 hADV29S1A0JD25 119 aa11.27□□□□□ -0.61
COPE-204ENST00000593827 C14orf144Q96I85 54 aa11.27□□□□□ -0.61
COPE-204ENST00000593827 HIGD1BQ9P298 99 aa11.27□□□□□ -0.61
COPE-204ENST00000593827 F8WEM9 126 aa11.26□□□□□ -0.61
COPE-204ENST00000593827 LINC01547P58512 204 aaPredicted RBP11.26□□□□□ -0.61
COPE-204ENST00000593827 HRCT1Q6UXD1 115 aa11.26□□□□□ -0.61
COPE-204ENST00000593827 SNCGO76070 127 aa11.25□□□□□ -0.61
COPE-204ENST00000593827 C12orf57Q99622 126 aa11.25□□□□□ -0.61
COPE-204ENST00000593827 SMIM29Q86T20 159 aa11.24□□□□□ -0.61
COPE-204ENST00000593827 RAB37Q96AX2 223 aa11.24□□□□□ -0.61
COPE-204ENST00000593827 Q6ZQY7 126 aa11.21□□□□□ -0.61
COPE-204ENST00000593827 MUC2Q02817 5179 aa11.2□□□□□ -0.62
COPE-204ENST00000593827 TMEM238LA0A1B0GVL6 79 aa11.2□□□□□ -0.62
COPE-204ENST00000593827 A6NJY4 79 aa11.2□□□□□ -0.62
COPE-204ENST00000593827 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.2□□□□□ -0.62
COPE-204ENST00000593827 PPDPFLQ8WWR9 84 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms