RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 SMIM4Q8WVI0 70 aa3.58□□□□□ -1.84
VMP1-215ENST00000592619 MANBALQ9NQG1 85 aa3.58□□□□□ -1.84
VMP1-215ENST00000592619 CMYA5Q8N3K9 4069 aa3.58□□□□□ -1.84
VMP1-215ENST00000592619 NDUFA11Q86Y39 141 aa3.57□□□□□ -1.84
VMP1-215ENST00000592619 MUC4Q99102 2169 aa3.57□□□□□ -1.84
VMP1-215ENST00000592619 LIMD2Q9BT23 127 aa3.57□□□□□ -1.84
VMP1-215ENST00000592619 TENM1Q9UKZ4 2725 aa3.57□□□□□ -1.84
VMP1-215ENST00000592619 COL6A5A8TX70 2615 aa3.57□□□□□ -1.84
VMP1-215ENST00000592619 TRBV25-1A0A075B6N4 114 aa3.56□□□□□ -1.84
VMP1-215ENST00000592619 IGHV3-64A0A075B6Q5 118 aa3.56□□□□□ -1.84
VMP1-215ENST00000592619 TRAV22A0A0B4J277 110 aa3.56□□□□□ -1.84
VMP1-215ENST00000592619 FXYD4P59646 89 aa3.56□□□□□ -1.84
VMP1-215ENST00000592619 MIR22HGQ0VDD5 57 aa3.56□□□□□ -1.84
VMP1-215ENST00000592619 PLGLAQ15195 96 aa3.56□□□□□ -1.84
VMP1-215ENST00000592619 ZNF818PQ6ZRF7 136 aa3.56□□□□□ -1.84
VMP1-215ENST00000592619 Q8NAQ8 132 aa3.56□□□□□ -1.84
VMP1-215ENST00000592619 TMEM254Q8TBM7 123 aa3.56□□□□□ -1.84
VMP1-215ENST00000592619 FXYD6Q9H0Q3 95 aa3.56□□□□□ -1.84
VMP1-215ENST00000592619 C22orf24Q9Y442 160 aa3.56□□□□□ -1.84
VMP1-215ENST00000592619 TRRAPQ9Y4A5 3859 aa3.55□□□□□ -1.84
VMP1-215ENST00000592619 IGHV3OR16-8A0A075B7F1 116 aa3.55□□□□□ -1.84
VMP1-215ENST00000592619 A0A1B0GU33 70 aa3.55□□□□□ -1.84
VMP1-215ENST00000592619 ERC2-IT1O76042 136 aa3.55□□□□□ -1.84
VMP1-215ENST00000592619 PYDC2Q56P42 97 aa3.55□□□□□ -1.84
VMP1-215ENST00000592619 Q5VV11 94 aa3.55□□□□□ -1.84
VMP1-215ENST00000592619 TRAV10A0A0B4J240 114 aa3.54□□□□□ -1.84
VMP1-215ENST00000592619 H3BUA1 57 aa3.54□□□□□ -1.84
VMP1-215ENST00000592619 COX6CP09669 75 aa3.54□□□□□ -1.84
VMP1-215ENST00000592619 TOMM5Q8N4H5 51 aa3.54□□□□□ -1.84
VMP1-215ENST00000592619 TMEM167AQ8TBQ9 72 aa3.54□□□□□ -1.84
VMP1-215ENST00000592619 STAB1Q9NY15 2570 aa3.53□□□□□ -1.84
VMP1-215ENST00000592619 TRAV23DV6A0A075B6W5 121 aa3.53□□□□□ -1.84
VMP1-215ENST00000592619 SDHAF1A6NFY7 115 aa3.53□□□□□ -1.84
VMP1-215ENST00000592619 P0C880 135 aa3.53□□□□□ -1.84
VMP1-215ENST00000592619 GCHFRP30047 84 aa3.53□□□□□ -1.84
VMP1-215ENST00000592619 FXYD3Q14802 87 aa3.53□□□□□ -1.84
VMP1-215ENST00000592619 KRTAP26-1Q6PEX3 210 aa3.53□□□□□ -1.84
VMP1-215ENST00000592619 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.53□□□□□ -1.84
VMP1-215ENST00000592619 FXYD6-FXYD2A0A087WZ82 144 aa3.52□□□□□ -1.85
VMP1-215ENST00000592619 MYMXA0A1B0GTQ4 84 aa3.52□□□□□ -1.85
VMP1-215ENST00000592619 G3V318 75 aa3.52□□□□□ -1.85
VMP1-215ENST00000592619 C10orf99Q6UWK7 81 aa3.52□□□□□ -1.85
VMP1-215ENST00000592619 C4orf3Q8WVX3 66 aa3.52□□□□□ -1.85
VMP1-215ENST00000592619 FAM103A1Q9BTL3 118 aaKnown RBP3.52□□□□□ -1.85
VMP1-215ENST00000592619 FAM223BA6NKX1 122 aa3.51□□□□□ -1.85
VMP1-215ENST00000592619 KLK9Q2XQG4 91 aa3.51□□□□□ -1.85
VMP1-215ENST00000592619 KRTAP13-2Q52LG2 175 aa3.51□□□□□ -1.85
VMP1-215ENST00000592619 IGFL1Q6UW32 110 aa3.51□□□□□ -1.85
VMP1-215ENST00000592619 C2orf82Q6UX34 121 aa3.51□□□□□ -1.85
VMP1-215ENST00000592619 USMG5Q96IX5 58 aa3.51□□□□□ -1.85
VMP1-215ENST00000592619 TMEM14BQ9NUH8 114 aa3.51□□□□□ -1.85
VMP1-215ENST00000592619 KLK9Q9UKQ9 250 aa3.51□□□□□ -1.85
VMP1-215ENST00000592619 DNAH3Q8TD57 4116 aa3.5□□□□□ -1.85
VMP1-215ENST00000592619 PRCDQ00LT1 54 aa3.5□□□□□ -1.85
VMP1-215ENST00000592619 C10orf55Q5SWW7 151 aa3.5□□□□□ -1.85
VMP1-215ENST00000592619 KPRPQ5T749 579 aaPredicted RBP3.5□□□□□ -1.85
VMP1-215ENST00000592619 BAGE3Q86Y29 109 aa3.5□□□□□ -1.85
VMP1-215ENST00000592619 BAGE2Q86Y30 109 aa3.5□□□□□ -1.85
VMP1-215ENST00000592619 C20orf197Q8N268 126 aa3.5□□□□□ -1.85
VMP1-215ENST00000592619 Q8TAT8 98 aa3.5□□□□□ -1.85
VMP1-215ENST00000592619 IFI27L1Q96BM0 104 aa3.5□□□□□ -1.85
VMP1-215ENST00000592619 NDUFA4L2Q9NRX3 87 aa3.5□□□□□ -1.85
VMP1-215ENST00000592619 VWFP04275 2813 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 PKD1L1Q8TDX9 2849 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 TRAV12-1A0A0B4J245 112 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 TRAV12-3A0A0B4J271 114 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 TEX49A0A1B0GTD5 131 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 LOC101927531A0A1B0GV80 90 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 A0A1W2PNM2 257 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 CEBPZOSA8MTT3 80 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 F8WEM9 126 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 CHKB-CPT1BH3BT56 60 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 PRB4P10163 310 aaPredicted RBP3.49□□□□□ -1.85
VMP1-215ENST00000592619 Q6JHZ5 121 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 SPINT4Q6UDR6 99 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 WFDC9Q8NEX5 89 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 CDC42SE2Q9NRR3 84 aa3.49□□□□□ -1.85
VMP1-215ENST00000592619 RTL8CO15255 209 aa3.48□□□□□ -1.85
VMP1-215ENST00000592619 IGHV3-33P01772 117 aa3.48□□□□□ -1.85
VMP1-215ENST00000592619 APELAP0DMC3 54 aa3.48□□□□□ -1.85
VMP1-215ENST00000592619 ERHP84090 104 aaKnown RBP3.48□□□□□ -1.85
VMP1-215ENST00000592619 WT1-ASQ06250 92 aa3.48□□□□□ -1.85
VMP1-215ENST00000592619 DEFB136Q30KP8 78 aa3.48□□□□□ -1.85
VMP1-215ENST00000592619 ARL2-SNX15V9GYD0 113 aa3.48□□□□□ -1.85
VMP1-215ENST00000592619 FBN3Q75N90 2809 aa3.47□□□□□ -1.85
VMP1-215ENST00000592619 C2orf70A6NJV1 201 aa3.47□□□□□ -1.85
VMP1-215ENST00000592619 ZNF815PA8K554 130 aa3.47□□□□□ -1.85
VMP1-215ENST00000592619 PRH1P02810 166 aa3.47□□□□□ -1.85
VMP1-215ENST00000592619 UBE2D1P51668 147 aa3.47□□□□□ -1.85
VMP1-215ENST00000592619 TRBV10-1A0A0K0K1A3 114 aa3.46□□□□□ -1.86
VMP1-215ENST00000592619 TNCP24821 2201 aa3.46□□□□□ -1.86
VMP1-215ENST00000592619 MEGF8Q7Z7M0 2845 aa3.45□□□□□ -1.86
VMP1-215ENST00000592619 TRBV6-8A0A0A6YYG3 113 aa3.45□□□□□ -1.86
VMP1-215ENST00000592619 I3L2K1 104 aa3.45□□□□□ -1.86
VMP1-215ENST00000592619 K7EIM0 57 aa3.45□□□□□ -1.86
VMP1-215ENST00000592619 IFI27P40305 119 aaPredicted RBP3.45□□□□□ -1.86
VMP1-215ENST00000592619 KRTAP13-3Q3SY46 172 aa3.45□□□□□ -1.86
VMP1-215ENST00000592619 SPINK9Q5DT21 86 aa3.45□□□□□ -1.86
VMP1-215ENST00000592619 ATP5EP2Q5VTU8 51 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms