RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 ANK2Q01484 3957 aa7.56□□□□□ -1.2
ZNF540-210ENST00000592533 H7BZZ5 65 aa7.56□□□□□ -1.2
ZNF540-210ENST00000592533 C7orf33Q8WU49 177 aa7.56□□□□□ -1.2
ZNF540-210ENST00000592533 IGLV5-48A0A075B6I7 105 aa7.56□□□□□ -1.2
ZNF540-210ENST00000592533 PKD1L1Q8TDX9 2849 aa7.55□□□□□ -1.2
ZNF540-210ENST00000592533 SERTAD4-AS1Q5TG53 156 aa7.55□□□□□ -1.2
ZNF540-210ENST00000592533 NKAPP1Q8N9T2 125 aa7.55□□□□□ -1.2
ZNF540-210ENST00000592533 A0A1B0GW54 56 aa7.55□□□□□ -1.2
ZNF540-210ENST00000592533 KRTAP4-16G5E9R7 235 aaPredicted RBP7.55□□□□□ -1.2
ZNF540-210ENST00000592533 C11orf45Q8TAV5 145 aa7.55□□□□□ -1.2
ZNF540-210ENST00000592533 EPM2AB3EWF7 344 aa7.54□□□□□ -1.2
ZNF540-210ENST00000592533 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
ZNF540-210ENST00000592533 SPRR1AP35321 89 aa7.54□□□□□ -1.2
ZNF540-210ENST00000592533 Q8N377 158 aa7.54□□□□□ -1.2
ZNF540-210ENST00000592533 DHRS4-AS1Q9P1J3 65 aa7.54□□□□□ -1.2
ZNF540-210ENST00000592533 PRYO14603 147 aa7.53□□□□□ -1.2
ZNF540-210ENST00000592533 FAM236DA0A1B0GTK5 79 aa7.53□□□□□ -1.2
ZNF540-210ENST00000592533 ERC2-IT1O76042 136 aa7.53□□□□□ -1.2
ZNF540-210ENST00000592533 FAM236CP0DP71 79 aa7.53□□□□□ -1.2
ZNF540-210ENST00000592533 Q6ZRX8 168 aa7.52□□□□□ -1.21
ZNF540-210ENST00000592533 IGKV4-1P06312 121 aa7.52□□□□□ -1.21
ZNF540-210ENST00000592533 DNAH1Q9P2D7 4330 aa7.52□□□□□ -1.21
ZNF540-210ENST00000592533 SCXQ7RTU7 201 aa7.52□□□□□ -1.21
ZNF540-210ENST00000592533 MRAPQ8TCY5 172 aa7.52□□□□□ -1.21
ZNF540-210ENST00000592533 IGLV1-50A0A075B6I6 118 aa7.51□□□□□ -1.21
ZNF540-210ENST00000592533 TNP2Q05952 138 aa7.51□□□□□ -1.21
ZNF540-210ENST00000592533 NDUFC1O43677 76 aa7.5□□□□□ -1.21
ZNF540-210ENST00000592533 TM2D3Q9BRN9 247 aa7.5□□□□□ -1.21
ZNF540-210ENST00000592533 NREPQ16612 68 aa7.5□□□□□ -1.21
ZNF540-210ENST00000592533 BPY2O14599 106 aa7.49□□□□□ -1.21
ZNF540-210ENST00000592533 Q9BRP9 147 aa7.49□□□□□ -1.21
ZNF540-210ENST00000592533 SERP1Q9Y6X1 66 aa7.49□□□□□ -1.21
ZNF540-210ENST00000592533 KRTAP7-1Q8IUC3 87 aa7.48□□□□□ -1.21
ZNF540-210ENST00000592533 LINC00588Q9Y4M8 146 aa7.48□□□□□ -1.21
ZNF540-210ENST00000592533 Q5XG85 94 aa7.47□□□□□ -1.21
ZNF540-210ENST00000592533 C5orf47Q569G3 176 aa7.47□□□□□ -1.21
ZNF540-210ENST00000592533 KRTAP24-1Q3LI83 254 aa7.47□□□□□ -1.21
ZNF540-210ENST00000592533 RMI2Q96E14 147 aa7.47□□□□□ -1.21
ZNF540-210ENST00000592533 OCR1Q9BZK8 76 aa7.47□□□□□ -1.21
ZNF540-210ENST00000592533 SNURFQ9Y675 71 aa7.46□□□□□ -1.21
ZNF540-210ENST00000592533 FAM168BA1KXE4 195 aa7.46□□□□□ -1.22
ZNF540-210ENST00000592533 FUSP35637 526 aaKnown RBP eCLIP7.46□□□□□ -1.22
ZNF540-210ENST00000592533 ATP5EP56381 51 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-210ENST00000592533 DEFB105AQ8NG35 78 aa7.45□□□□□ -1.22
ZNF540-210ENST00000592533 ETDCA0A1B0GVM5 59 aa7.45□□□□□ -1.22
ZNF540-210ENST00000592533 A0A1W2PNM2 257 aa7.45□□□□□ -1.22
ZNF540-210ENST00000592533 SPRR4Q96PI1 79 aa7.45□□□□□ -1.22
ZNF540-210ENST00000592533 F8WEM9 126 aa7.45□□□□□ -1.22
ZNF540-210ENST00000592533 C3orf84H3BNL1 204 aa7.45□□□□□ -1.22
ZNF540-210ENST00000592533 CASC10Q5T4H9 136 aa7.45□□□□□ -1.22
ZNF540-210ENST00000592533 Q8N9L7 120 aa7.45□□□□□ -1.22
ZNF540-210ENST00000592533 RPL37AP8A6NKH3 93 aa7.44□□□□□ -1.22
ZNF540-210ENST00000592533 TMEM254Q8TBM7 123 aa7.44□□□□□ -1.22
ZNF540-210ENST00000592533 MRPL55Q7Z7F7 128 aaKnown RBP7.44□□□□□ -1.22
ZNF540-210ENST00000592533 Q8NBF4 154 aa7.44□□□□□ -1.22
ZNF540-210ENST00000592533 C1orf137Q5JT78 98 aa7.43□□□□□ -1.22
ZNF540-210ENST00000592533 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
ZNF540-210ENST00000592533 ST20-AS1Q8NBB2 130 aa7.41□□□□□ -1.22
ZNF540-210ENST00000592533 MAST4O15021 2626 aa7.41□□□□□ -1.22
ZNF540-210ENST00000592533 LCE6AA0A183 80 aa7.4□□□□□ -1.22
ZNF540-210ENST00000592533 C4orf26Q17RF5 130 aa7.39□□□□□ -1.23
ZNF540-210ENST00000592533 REG3GQ6UW15 175 aa7.39□□□□□ -1.23
ZNF540-210ENST00000592533 F8P00451 2351 aa7.39□□□□□ -1.23
ZNF540-210ENST00000592533 SMIM29Q86T20 159 aa7.38□□□□□ -1.23
ZNF540-210ENST00000592533 FLNBO75369 2602 aaKnown RBP7.38□□□□□ -1.23
ZNF540-210ENST00000592533 STAB1Q9NY15 2570 aa7.38□□□□□ -1.23
ZNF540-210ENST00000592533 HUWE1Q7Z6Z7 4374 aaKnown RBP7.36□□□□□ -1.23
ZNF540-210ENST00000592533 FBN1P35555 2871 aaKnown RBP7.36□□□□□ -1.23
ZNF540-210ENST00000592533 DSCR10P59022 87 aa7.36□□□□□ -1.23
ZNF540-210ENST00000592533 IGLV8-61A0A075B6I0 122 aa7.36□□□□□ -1.23
ZNF540-210ENST00000592533 SMIM26A0A096LP01 95 aa7.36□□□□□ -1.23
ZNF540-210ENST00000592533 CNBPP62633 177 aaKnown RBP7.36□□□□□ -1.23
ZNF540-210ENST00000592533 UBE2BP63146 152 aa7.36□□□□□ -1.23
ZNF540-210ENST00000592533 C16orf90A8MZG2 172 aa7.34□□□□□ -1.23
ZNF540-210ENST00000592533 HRCT1Q6UXD1 115 aa7.34□□□□□ -1.24
ZNF540-210ENST00000592533 LINC00476Q8WZB0 136 aa7.34□□□□□ -1.24
ZNF540-210ENST00000592533 BAHCC1Q9P281 2608 aa7.33□□□□□ -1.24
ZNF540-210ENST00000592533 K7EIL1 84 aa7.32□□□□□ -1.24
ZNF540-210ENST00000592533 FP248Q71RG6 208 aaPredicted RBP7.32□□□□□ -1.24
ZNF540-210ENST00000592533 A0A096LNI7 61 aa7.32□□□□□ -1.24
ZNF540-210ENST00000592533 K7EQZ3 153 aa7.31□□□□□ -1.24
ZNF540-210ENST00000592533 IGFL1Q6UW32 110 aa7.31□□□□□ -1.24
ZNF540-210ENST00000592533 HIGD2AQ9BW72 106 aa7.31□□□□□ -1.24
ZNF540-210ENST00000592533 NOTCH1P46531 2555 aa7.31□□□□□ -1.24
ZNF540-210ENST00000592533 ZCCHC13Q8WW36 166 aaKnown RBP7.3□□□□□ -1.24
ZNF540-210ENST00000592533 KRTAP1-5Q9BYS1 174 aa7.3□□□□□ -1.24
ZNF540-210ENST00000592533 FAM30AQ9NZY2 134 aa7.29□□□□□ -1.24
ZNF540-210ENST00000592533 A0A1W2PNN7 141 aa7.29□□□□□ -1.24
ZNF540-210ENST00000592533 H0Y9J4 135 aa7.29□□□□□ -1.24
ZNF540-210ENST00000592533 HCG22E2RYF7 251 aa7.27□□□□□ -1.24
ZNF540-210ENST00000592533 PRB2P02812 416 aaPredicted RBP7.27□□□□□ -1.24
ZNF540-210ENST00000592533 SPRR1BP22528 89 aa7.27□□□□□ -1.24
ZNF540-210ENST00000592533 NBEAL1Q6ZS30 2694 aa7.27□□□□□ -1.25
ZNF540-210ENST00000592533 PSCAO43653 123 aa7.27□□□□□ -1.25
ZNF540-210ENST00000592533 DYNC2H1Q8NCM8 4307 aaKnown RBP7.26□□□□□ -1.25
ZNF540-210ENST00000592533 PRLHP81277 87 aa7.26□□□□□ -1.25
ZNF540-210ENST00000592533 C14orf177Q52M58 125 aa7.26□□□□□ -1.25
ZNF540-210ENST00000592533 DNAH10Q8IVF4 4471 aa7.24□□□□□ -1.25
ZNF540-210ENST00000592533 IGKV2-24A0A0C4DH68 120 aa7.24□□□□□ -1.25
ZNF540-210ENST00000592533 LINC00474Q9P2X8 69 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms