RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 C6orf99Q4VX62 202 aa4.06□□□□□ -1.76
NPC1-213ENST00000591955 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
NPC1-213ENST00000591955 DIRC1Q969H9 104 aa4.06□□□□□ -1.76
NPC1-213ENST00000591955 UBE2E2Q96LR5 201 aa4.06□□□□□ -1.76
NPC1-213ENST00000591955 TM2D3Q9BRN9 247 aa4.06□□□□□ -1.76
NPC1-213ENST00000591955 MXRA5Q9NR99 2828 aa4.05□□□□□ -1.76
NPC1-213ENST00000591955 TRBV6-8A0A0A6YYG3 113 aa4.05□□□□□ -1.76
NPC1-213ENST00000591955 LOC100131303A0A0U1RQF7 123 aa4.05□□□□□ -1.76
NPC1-213ENST00000591955 IGKV3-20P01619 116 aa4.05□□□□□ -1.76
NPC1-213ENST00000591955 DEFB113Q30KQ7 82 aa4.05□□□□□ -1.76
NPC1-213ENST00000591955 HIGD2BQ4VC39 106 aa4.05□□□□□ -1.76
NPC1-213ENST00000591955 C16orf74Q96GX8 76 aa4.05□□□□□ -1.76
NPC1-213ENST00000591955 SONP18583 2426 aaKnown RBP4.04□□□□□ -1.76
NPC1-213ENST00000591955 TRGV1A0A0A0MS02 117 aa4.04□□□□□ -1.76
NPC1-213ENST00000591955 IGHV4-61A0A0C4DH41 118 aa4.04□□□□□ -1.76
NPC1-213ENST00000591955 A0A1W2PPR1 153 aa4.04□□□□□ -1.76
NPC1-213ENST00000591955 IGLV6-57P01721 117 aa4.04□□□□□ -1.76
NPC1-213ENST00000591955 PROK1P58294 105 aa4.04□□□□□ -1.76
NPC1-213ENST00000591955 DEFB131AP59861 70 aa4.04□□□□□ -1.76
NPC1-213ENST00000591955 NANOS2P60321 138 aaKnown RBP4.04□□□□□ -1.76
NPC1-213ENST00000591955 PHF5AQ7RTV0 110 aaKnown RBP4.04□□□□□ -1.76
NPC1-213ENST00000591955 SPANXA2-OT1Q8N9U9 137 aa4.04□□□□□ -1.76
NPC1-213ENST00000591955 HIVEP2P31629 2446 aa4.03□□□□□ -1.76
NPC1-213ENST00000591955 GVQW2A0A096LPI5 108 aaPredicted RBP4.03□□□□□ -1.76
NPC1-213ENST00000591955 LINC00959A0A1B0GUT2 108 aa4.03□□□□□ -1.76
NPC1-213ENST00000591955 ETDCA0A1B0GVM5 59 aa4.03□□□□□ -1.76
NPC1-213ENST00000591955 IGKV4-1P06312 121 aa4.03□□□□□ -1.76
NPC1-213ENST00000591955 Q6ZTI0 123 aa4.03□□□□□ -1.76
NPC1-213ENST00000591955 ZANQ9Y493 2812 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 A0A096LNT2 108 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 H3BUX3 64 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 HTN1P15515 57 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 MP68P56378 58 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 KRTAP24-1Q3LI83 254 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 CD164L2Q6UWJ8 174 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 Q6ZQY7 126 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 MAPK1IP1LQ8NDC0 245 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 Q9BRP9 147 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 RETNQ9HD89 108 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 CELA1Q9UNI1 258 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 CR1P17927 2039 aa4.02□□□□□ -1.77
NPC1-213ENST00000591955 TRGV2A0A075B6R0 118 aa4.01□□□□□ -1.77
NPC1-213ENST00000591955 A0A087X002 238 aa4.01□□□□□ -1.77
NPC1-213ENST00000591955 TRAV22A0A0B4J277 110 aa4.01□□□□□ -1.77
NPC1-213ENST00000591955 A0A0J9YWU9 116 aa4.01□□□□□ -1.77
NPC1-213ENST00000591955 IGHV4-30-4P0DP06 118 aa4.01□□□□□ -1.77
NPC1-213ENST00000591955 Q6ZRP5 223 aa4.01□□□□□ -1.77
NPC1-213ENST00000591955 C1orf64Q8NEQ6 169 aa4.01□□□□□ -1.77
NPC1-213ENST00000591955 ZCCHC13Q8WW36 166 aaKnown RBP4.01□□□□□ -1.77
NPC1-213ENST00000591955 MAP6D1Q9H9H5 199 aa4.01□□□□□ -1.77
NPC1-213ENST00000591955 TRGV4A0A0C4DH28 118 aa4□□□□□ -1.77
NPC1-213ENST00000591955 HCG22E2RYF7 251 aa4□□□□□ -1.77
NPC1-213ENST00000591955 FAM229BQ4G0N7 80 aa4□□□□□ -1.77
NPC1-213ENST00000591955 MEGF8Q7Z7M0 2845 aa4□□□□□ -1.77
NPC1-213ENST00000591955 SVEP1Q4LDE5 3571 aa4□□□□□ -1.77
NPC1-213ENST00000591955 PSCAO43653 123 aa3.99□□□□□ -1.77
NPC1-213ENST00000591955 ASB16-AS1Q495Z4 193 aa3.99□□□□□ -1.77
NPC1-213ENST00000591955 LINC00588Q9Y4M8 146 aa3.99□□□□□ -1.77
NPC1-213ENST00000591955 ROS1P08922 2347 aa3.98□□□□□ -1.77
NPC1-213ENST00000591955 ZNF73O43830 326 aaPredicted RBP3.98□□□□□ -1.77
NPC1-213ENST00000591955 DSCR9P59020 149 aa3.98□□□□□ -1.77
NPC1-213ENST00000591955 SYCNQ0VAF6 134 aa3.98□□□□□ -1.77
NPC1-213ENST00000591955 C7orf65Q6ZTY9 151 aa3.98□□□□□ -1.77
NPC1-213ENST00000591955 Q75L30 129 aa3.98□□□□□ -1.77
NPC1-213ENST00000591955 LINC00269Q8N2A0 174 aa3.98□□□□□ -1.77
NPC1-213ENST00000591955 C4orf3Q8WVX3 66 aa3.98□□□□□ -1.77
NPC1-213ENST00000591955 HIGD2AQ9BW72 106 aa3.98□□□□□ -1.77
NPC1-213ENST00000591955 LOC101927531A0A1B0GV80 90 aa3.97□□□□□ -1.77
NPC1-213ENST00000591955 LY6EQ16553 131 aa3.97□□□□□ -1.77
NPC1-213ENST00000591955 B9D2Q9BPU9 175 aa3.97□□□□□ -1.77
NPC1-213ENST00000591955 KCNQ1DNQ9H478 68 aa3.97□□□□□ -1.77
NPC1-213ENST00000591955 IGLV4-60A0A075B6I1 120 aa3.96□□□□□ -1.78
NPC1-213ENST00000591955 IGLV5-48A0A075B6I7 105 aa3.96□□□□□ -1.78
NPC1-213ENST00000591955 B4DSR2 109 aa3.96□□□□□ -1.78
NPC1-213ENST00000591955 M0R378 163 aa3.96□□□□□ -1.78
NPC1-213ENST00000591955 MSMBP08118 114 aa3.96□□□□□ -1.78
NPC1-213ENST00000591955 KIAA0087Q14695 138 aa3.96□□□□□ -1.78
NPC1-213ENST00000591955 LCA10Q71F78 164 aa3.96□□□□□ -1.78
NPC1-213ENST00000591955 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
NPC1-213ENST00000591955 RBM12B-AS1Q9P1G2 102 aa3.96□□□□□ -1.78
NPC1-213ENST00000591955 DHRS4-AS1Q9P1J3 65 aa3.96□□□□□ -1.78
NPC1-213ENST00000591955 Q9UF83 564 aa3.96□□□□□ -1.78
NPC1-213ENST00000591955 CHKB-CPT1BH3BT56 60 aa3.95□□□□□ -1.78
NPC1-213ENST00000591955 Q5VV11 94 aa3.95□□□□□ -1.78
NPC1-213ENST00000591955 LINC00208Q96KT6 92 aa3.95□□□□□ -1.78
NPC1-213ENST00000591955 CCL19Q99731 98 aa3.95□□□□□ -1.78
NPC1-213ENST00000591955 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.95□□□□□ -1.782e-6■■□□□ 13.9
NPC1-213ENST00000591955 TGP01266 2768 aa3.95□□□□□ -1.78
NPC1-213ENST00000591955 IGKV3OR2-268A0A0C4DH90 116 aa3.94□□□□□ -1.78
NPC1-213ENST00000591955 SPAG11BQ08648 103 aa3.94□□□□□ -1.78
NPC1-213ENST00000591955 BRD3OSQ6XYD6 125 aa3.94□□□□□ -1.78
NPC1-213ENST00000591955 NOP10Q9NPE3 64 aaKnown RBP3.94□□□□□ -1.78
NPC1-213ENST00000591955 PSPHP1O15172 72 aa3.93□□□□□ -1.78
NPC1-213ENST00000591955 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
NPC1-213ENST00000591955 SCXQ7RTU7 201 aa3.93□□□□□ -1.78
NPC1-213ENST00000591955 SMIM29Q86T20 159 aa3.93□□□□□ -1.78
NPC1-213ENST00000591955 LINC00612Q8N6U2 182 aa3.93□□□□□ -1.78
NPC1-213ENST00000591955 CHCHD10Q8WYQ3 142 aaPredicted RBP3.93□□□□□ -1.78
NPC1-213ENST00000591955 SPRR4Q96PI1 79 aa3.93□□□□□ -1.78
NPC1-213ENST00000591955 PRO0255Q9UI72 69 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms