RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 FAM19A1Q7Z5A9 133 aa7.15□□□□□ -1.26
LIG3-213ENST00000590630 KCNQ1DNQ9H478 68 aa7.15□□□□□ -1.26
LIG3-213ENST00000590630 TRBV10-3A0A0K0K1G6 114 aa7.14□□□□□ -1.27
LIG3-213ENST00000590630 PRLHP81277 87 aa7.14□□□□□ -1.27
LIG3-213ENST00000590630 SOSTDC1Q6X4U4 206 aa7.14□□□□□ -1.27
LIG3-213ENST00000590630 HSBP1L1C9JCN9 74 aa7.13□□□□□ -1.27
LIG3-213ENST00000590630 EIF4EBP3O60516 100 aaPredicted RBP7.13□□□□□ -1.27
LIG3-213ENST00000590630 NPC2P61916 151 aa7.13□□□□□ -1.27
LIG3-213ENST00000590630 SCGB1D4Q6XE38 83 aa7.13□□□□□ -1.27
LIG3-213ENST00000590630 LINC00308Q8TCZ7 52 aa7.13□□□□□ -1.27
LIG3-213ENST00000590630 SPANXCQ9NY87 97 aa7.13□□□□□ -1.27
LIG3-213ENST00000590630 SPRR1AP35321 89 aa7.12□□□□□ -1.27
LIG3-213ENST00000590630 RPL13AP40429 203 aaKnown RBP7.12□□□□□ -1.27
LIG3-213ENST00000590630 LINC00337Q8N6G1 96 aa7.12□□□□□ -1.27
LIG3-213ENST00000590630 PRR26Q8N8Z3 221 aa7.12□□□□□ -1.27
LIG3-213ENST00000590630 K7ERU9 68 aa7.11□□□□□ -1.27
LIG3-213ENST00000590630 IGLV6-57P01721 117 aa7.11□□□□□ -1.27
LIG3-213ENST00000590630 HINT1P49773 126 aaPredicted RBP7.11□□□□□ -1.27
LIG3-213ENST00000590630 S100A7L2Q5SY68 101 aa7.11□□□□□ -1.27
LIG3-213ENST00000590630 PCP2Q8IVA1 136 aa7.11□□□□□ -1.27
LIG3-213ENST00000590630 COPS9Q8WXC6 57 aa7.11□□□□□ -1.27
LIG3-213ENST00000590630 SPANXDQ9BXN6 97 aa7.11□□□□□ -1.27
LIG3-213ENST00000590630 ETDCA0A1B0GVM5 59 aa7.1□□□□□ -1.27
LIG3-213ENST00000590630 VAMP3Q15836 100 aa7.1□□□□□ -1.27
LIG3-213ENST00000590630 OCIAD2Q56VL3 154 aa7.1□□□□□ -1.27
LIG3-213ENST00000590630 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
LIG3-213ENST00000590630 Q6ZVH6 145 aa7.09□□□□□ -1.27
LIG3-213ENST00000590630 HIGD2AQ9BW72 106 aa7.09□□□□□ -1.27
LIG3-213ENST00000590630 PPDPFQ9H3Y8 114 aa7.09□□□□□ -1.27
LIG3-213ENST00000590630 TAX1BP3O14907 124 aa7.08□□□□□ -1.28
LIG3-213ENST00000590630 CRYGAP11844 174 aa7.08□□□□□ -1.28
LIG3-213ENST00000590630 IFITM1P13164 125 aa7.08□□□□□ -1.28
LIG3-213ENST00000590630 SLC25A34Q6PIV7 304 aa7.08□□□□□ -1.28
LIG3-213ENST00000590630 VPS25Q9BRG1 176 aa7.08□□□□□ -1.28
LIG3-213ENST00000590630 HMCN2Q8NDA2 5059 aa7.07□□□□□ -1.28
LIG3-213ENST00000590630 TRAV23DV6A0A075B6W5 121 aa7.07□□□□□ -1.28
LIG3-213ENST00000590630 FAM229BQ4G0N7 80 aa7.07□□□□□ -1.28
LIG3-213ENST00000590630 BVES-AS1Q5T3Y7 98 aa7.07□□□□□ -1.28
LIG3-213ENST00000590630 A0A087X002 238 aa7.06□□□□□ -1.28
LIG3-213ENST00000590630 B5MCH6 92 aa7.05□□□□□ -1.28
LIG3-213ENST00000590630 ZNF73O43830 326 aaPredicted RBP7.05□□□□□ -1.28
LIG3-213ENST00000590630 Q6ZRX8 168 aa7.05□□□□□ -1.28
LIG3-213ENST00000590630 GTF2H5Q6ZYL4 71 aa7.05□□□□□ -1.28
LIG3-213ENST00000590630 OR13C6PQ8NH95 151 aa7.05□□□□□ -1.28
LIG3-213ENST00000590630 ZNF706Q9Y5V0 76 aaPredicted RBP7.05□□□□□ -1.28
LIG3-213ENST00000590630 ANAPC11Q9NYG5 84 aa7.04□□□□□ -1.28
LIG3-213ENST00000590630 MUSTN1Q8IVN3 82 aa7.03□□□□□ -1.28
LIG3-213ENST00000590630 TYMSOSQ8TAI1 123 aa7.03□□□□□ -1.28
LIG3-213ENST00000590630 SMCR5Q8TEV8 140 aa7.03□□□□□ -1.28
LIG3-213ENST00000590630 SPRR4Q96PI1 79 aa7.03□□□□□ -1.28
LIG3-213ENST00000590630 COX8AP10176 69 aa7.02□□□□□ -1.29
LIG3-213ENST00000590630 SCGB1A1P11684 91 aa7.02□□□□□ -1.29
LIG3-213ENST00000590630 A6NDN8 102 aa7.01□□□□□ -1.29
LIG3-213ENST00000590630 KRTAP13-2Q52LG2 175 aa7.01□□□□□ -1.29
LIG3-213ENST00000590630 Q9BRP9 147 aa7.01□□□□□ -1.29
LIG3-213ENST00000590630 C9orf118A6NHY6 69 aa6.99□□□□□ -1.29
LIG3-213ENST00000590630 TRAV13-2A0A0B4J235 113 aa6.98□□□□□ -1.29
LIG3-213ENST00000590630 K7EP34 96 aa6.98□□□□□ -1.29
LIG3-213ENST00000590630 ERC2-IT1O76042 136 aa6.98□□□□□ -1.29
LIG3-213ENST00000590630 HSD52Q0P140 79 aa6.98□□□□□ -1.29
LIG3-213ENST00000590630 LINC00483Q53H64 154 aa6.98□□□□□ -1.29
LIG3-213ENST00000590630 TRBV7-6A0A0J9YX20 115 aa6.97□□□□□ -1.29
LIG3-213ENST00000590630 C6orf99Q4VX62 202 aa6.97□□□□□ -1.29
LIG3-213ENST00000590630 DHRS4-AS1Q9P1J3 65 aa6.97□□□□□ -1.29
LIG3-213ENST00000590630 ELOF1P60002 83 aaKnown RBP6.96□□□□□ -1.3
LIG3-213ENST00000590630 GAGE2AQ6NT46 116 aa6.96□□□□□ -1.3
LIG3-213ENST00000590630 C2orf91Q6ZV80 131 aa6.96□□□□□ -1.3
LIG3-213ENST00000590630 HIST1H4GQ99525 98 aa6.96□□□□□ -1.3
LIG3-213ENST00000590630 A4D1N5 150 aa6.95□□□□□ -1.3
LIG3-213ENST00000590630 COX7BP24311 80 aa6.95□□□□□ -1.3
LIG3-213ENST00000590630 C3orf22Q8N5N4 141 aa6.95□□□□□ -1.3
LIG3-213ENST00000590630 LINC00304Q8N9R0 145 aa6.95□□□□□ -1.3
LIG3-213ENST00000590630 SVIPQ8NHG7 77 aa6.95□□□□□ -1.3
LIG3-213ENST00000590630 HIGD1BQ9P298 99 aa6.94□□□□□ -1.3
LIG3-213ENST00000590630 A0A1B0GWB2 263 aa6.93□□□□□ -1.3
LIG3-213ENST00000590630 TSPAN13O95857 204 aa6.93□□□□□ -1.3
LIG3-213ENST00000590630 J3QR89 54 aa6.92□□□□□ -1.3
LIG3-213ENST00000590630 SMIM11BQ8TCY0 68 aa6.92□□□□□ -1.3
LIG3-213ENST00000590630 LRP2P98164 4655 aa6.92□□□□□ -1.3
LIG3-213ENST00000590630 A0A1W2PPM0 123 aa6.91□□□□□ -1.3
LIG3-213ENST00000590630 FABP2P12104 132 aa6.91□□□□□ -1.3
LIG3-213ENST00000590630 SPAG11AQ6PDA7 123 aa6.91□□□□□ -1.3
LIG3-213ENST00000590630 ST20-AS1Q8NBB2 130 aa6.91□□□□□ -1.3
LIG3-213ENST00000590630 SPCS1Q9Y6A9 102 aa6.9□□□□□ -1.3
LIG3-213ENST00000590630 UBR4Q5T4S7 5183 aa6.9□□□□□ -1.31
LIG3-213ENST00000590630 IGLV9-49A0A0B4J1Y8 123 aa6.89□□□□□ -1.31
LIG3-213ENST00000590630 H3BUT2 72 aa6.89□□□□□ -1.31
LIG3-213ENST00000590630 SPRR1BP22528 89 aa6.89□□□□□ -1.31
LIG3-213ENST00000590630 MOBPQ13875 183 aa6.89□□□□□ -1.31
LIG3-213ENST00000590630 Q8NBF4 154 aa6.89□□□□□ -1.31
LIG3-213ENST00000590630 NHP2Q9NX24 153 aaKnown RBP6.89□□□□□ -1.31
LIG3-213ENST00000590630 A0A1B0GV72 72 aa6.88□□□□□ -1.31
LIG3-213ENST00000590630 TMEM238LA0A1B0GVL6 79 aa6.88□□□□□ -1.31
LIG3-213ENST00000590630 TAL2Q16559 108 aa6.88□□□□□ -1.31
LIG3-213ENST00000590630 C4orf48Q5BLP8 95 aa6.88□□□□□ -1.31
LIG3-213ENST00000590630 SSBP3-AS1Q7Z2R9 100 aa6.88□□□□□ -1.31
LIG3-213ENST00000590630 MTURNQ8N3F0 131 aa6.88□□□□□ -1.31
LIG3-213ENST00000590630 SIGMAR1Q99720 223 aa6.88□□□□□ -1.31
LIG3-213ENST00000590630 F8W1H4 67 aa6.87□□□□□ -1.31
LIG3-213ENST00000590630 PRR4Q16378 134 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms