RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 TRAV13-2A0A0B4J235 113 aa7.85□□□□□ -1.15
DDX39A-213ENST00000590315 ZNF861PO60384 105 aa7.85□□□□□ -1.15
DDX39A-213ENST00000590315 HIGD2AQ9BW72 106 aa7.85□□□□□ -1.15
DDX39A-213ENST00000590315 SRRM2Q9UQ35 2752 aaKnown RBP7.84□□□□□ -1.15
DDX39A-213ENST00000590315 HINT1P49773 126 aaPredicted RBP7.84□□□□□ -1.15
DDX39A-213ENST00000590315 TAL2Q16559 108 aa7.84□□□□□ -1.15
DDX39A-213ENST00000590315 RAB37Q96AX2 223 aa7.84□□□□□ -1.15
DDX39A-213ENST00000590315 ABCA13Q86UQ4 5058 aa7.83□□□□□ -1.16
DDX39A-213ENST00000590315 TMEM238LA0A1B0GVL6 79 aa7.83□□□□□ -1.16
DDX39A-213ENST00000590315 A6NJY4 79 aa7.83□□□□□ -1.16
DDX39A-213ENST00000590315 H0Y9J4 135 aa7.83□□□□□ -1.16
DDX39A-213ENST00000590315 ZNF73O43830 326 aaPredicted RBP7.83□□□□□ -1.16
DDX39A-213ENST00000590315 RPL13AP40429 203 aaKnown RBP7.83□□□□□ -1.16
DDX39A-213ENST00000590315 HSD52Q0P140 79 aa7.83□□□□□ -1.16
DDX39A-213ENST00000590315 CEND1Q8N111 149 aa7.83□□□□□ -1.16
DDX39A-213ENST00000590315 TSTD3H0UI37 97 aa7.81□□□□□ -1.16
DDX39A-213ENST00000590315 H7C2G1 150 aa7.81□□□□□ -1.16
DDX39A-213ENST00000590315 SPRR1AP35321 89 aa7.81□□□□□ -1.16
DDX39A-213ENST00000590315 FLG2Q5D862 2391 aaPredicted RBP7.8□□□□□ -1.16
DDX39A-213ENST00000590315 C6orf99Q4VX62 202 aa7.8□□□□□ -1.16
DDX39A-213ENST00000590315 B5MCH6 92 aa7.79□□□□□ -1.16
DDX39A-213ENST00000590315 FXYD2P54710 66 aa7.79□□□□□ -1.16
DDX39A-213ENST00000590315 Q1RN00 199 aa7.79□□□□□ -1.16
DDX39A-213ENST00000590315 KRTAP13-1Q8IUC0 172 aa7.79□□□□□ -1.16
DDX39A-213ENST00000590315 J3QL48 77 aa7.78□□□□□ -1.16
DDX39A-213ENST00000590315 COX7BP24311 80 aa7.78□□□□□ -1.16
DDX39A-213ENST00000590315 Q6ZRX8 168 aa7.78□□□□□ -1.16
DDX39A-213ENST00000590315 SMIM11BQ8TCY0 68 aa7.78□□□□□ -1.16
DDX39A-213ENST00000590315 KRTAP4-16G5E9R7 235 aaPredicted RBP7.77□□□□□ -1.17
DDX39A-213ENST00000590315 CFC1BP0CG36 223 aa7.77□□□□□ -1.17
DDX39A-213ENST00000590315 CFC1P0CG37 223 aa7.77□□□□□ -1.17
DDX39A-213ENST00000590315 SMCR5Q8TEV8 140 aa7.77□□□□□ -1.17
DDX39A-213ENST00000590315 NHP2Q9NX24 153 aaKnown RBP7.77□□□□□ -1.17
DDX39A-213ENST00000590315 PCLOQ9Y6V0 5065 aa7.77□□□□□ -1.17
DDX39A-213ENST00000590315 A0A0B4J2C4 111 aa7.76□□□□□ -1.17
DDX39A-213ENST00000590315 OXTP01178 125 aa7.75□□□□□ -1.17
DDX39A-213ENST00000590315 CTAG1AP78358 180 aa7.75□□□□□ -1.17
DDX39A-213ENST00000590315 ZNF706Q9Y5V0 76 aaPredicted RBP7.75□□□□□ -1.17
DDX39A-213ENST00000590315 A0A1B0GWB2 263 aa7.74□□□□□ -1.17
DDX39A-213ENST00000590315 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
DDX39A-213ENST00000590315 VAMP3Q15836 100 aa7.74□□□□□ -1.17
DDX39A-213ENST00000590315 Q9BRP9 147 aa7.74□□□□□ -1.17
DDX39A-213ENST00000590315 K7ERJ3 54 aa7.73□□□□□ -1.17
DDX39A-213ENST00000590315 M0R143 59 aa7.73□□□□□ -1.17
DDX39A-213ENST00000590315 PRO1854Q9UHT4 67 aa7.73□□□□□ -1.17
DDX39A-213ENST00000590315 KRTAP29-1A8MX34 341 aaPredicted RBP7.72□□□□□ -1.17
DDX39A-213ENST00000590315 ERC2-IT1O76042 136 aa7.72□□□□□ -1.17
DDX39A-213ENST00000590315 BVES-AS1Q5T3Y7 98 aa7.72□□□□□ -1.17
DDX39A-213ENST00000590315 DHRS4-AS1Q9P1J3 65 aa7.72□□□□□ -1.17
DDX39A-213ENST00000590315 TRBV7-6A0A0J9YX20 115 aa7.71□□□□□ -1.18
DDX39A-213ENST00000590315 SLC25A20O43772 301 aa7.71□□□□□ -1.18
DDX39A-213ENST00000590315 PRR26Q8N8Z3 221 aa7.71□□□□□ -1.18
DDX39A-213ENST00000590315 LINC01600Q96MT4 127 aa7.71□□□□□ -1.18
DDX39A-213ENST00000590315 ANAPC11Q9NYG5 84 aa7.71□□□□□ -1.18
DDX39A-213ENST00000590315 KRTAP1-4P0C5Y4 121 aa7.7□□□□□ -1.18
DDX39A-213ENST00000590315 BATFQ16520 125 aa7.7□□□□□ -1.18
DDX39A-213ENST00000590315 GAGE2AQ6NT46 116 aa7.7□□□□□ -1.18
DDX39A-213ENST00000590315 SPRR4Q96PI1 79 aa7.7□□□□□ -1.18
DDX39A-213ENST00000590315 PSMB2P49721 201 aa7.69□□□□□ -1.18
DDX39A-213ENST00000590315 CRYGAP11844 174 aa7.68□□□□□ -1.18
DDX39A-213ENST00000590315 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
DDX39A-213ENST00000590315 DEFB105AQ8NG35 78 aa7.67□□□□□ -1.18
DDX39A-213ENST00000590315 FAT3Q8TDW7 4589 aa7.67□□□□□ -1.18
DDX39A-213ENST00000590315 MYCBP2O75592 4640 aa7.65□□□□□ -1.18
DDX39A-213ENST00000590315 A0A087X002 238 aa7.65□□□□□ -1.18
DDX39A-213ENST00000590315 TSPAN13O95857 204 aa7.65□□□□□ -1.18
DDX39A-213ENST00000590315 FAM229BQ4G0N7 80 aa7.65□□□□□ -1.18
DDX39A-213ENST00000590315 TYMSOSQ8TAI1 123 aa7.65□□□□□ -1.18
DDX39A-213ENST00000590315 IGLV9-49A0A0B4J1Y8 123 aa7.64□□□□□ -1.19
DDX39A-213ENST00000590315 hADV29S1A0JD25 119 aa7.64□□□□□ -1.19
DDX39A-213ENST00000590315 TRIAP1O43715 76 aa7.64□□□□□ -1.19
DDX39A-213ENST00000590315 SNCGO76070 127 aa7.64□□□□□ -1.19
DDX39A-213ENST00000590315 LINC00575Q6W349 94 aa7.64□□□□□ -1.19
DDX39A-213ENST00000590315 LRP1Q07954 4544 aaKnown RBP7.63□□□□□ -1.19
DDX39A-213ENST00000590315 H0YGX0 51 aa7.63□□□□□ -1.19
DDX39A-213ENST00000590315 COX6CP09669 75 aa7.63□□□□□ -1.19
DDX39A-213ENST00000590315 MT1HL1P0DM35 61 aa7.63□□□□□ -1.19
DDX39A-213ENST00000590315 C9orf153Q5TBE3 101 aa7.63□□□□□ -1.19
DDX39A-213ENST00000590315 C3orf22Q8N5N4 141 aa7.63□□□□□ -1.19
DDX39A-213ENST00000590315 PCP4L1A6NKN8 68 aa7.61□□□□□ -1.19
DDX39A-213ENST00000590315 SCGB1C2P0DMR2 95 aa7.61□□□□□ -1.19
DDX39A-213ENST00000590315 KRTAP10-8P60410 259 aa7.61□□□□□ -1.19
DDX39A-213ENST00000590315 KRTAP13-2Q52LG2 175 aa7.61□□□□□ -1.19
DDX39A-213ENST00000590315 LINC00483Q53H64 154 aa7.61□□□□□ -1.19
DDX39A-213ENST00000590315 Q6ZQY7 126 aa7.61□□□□□ -1.19
DDX39A-213ENST00000590315 MOBPQ13875 183 aa7.6□□□□□ -1.19
DDX39A-213ENST00000590315 CLEC2BQ92478 149 aa7.6□□□□□ -1.19
DDX39A-213ENST00000590315 TEX49A0A1B0GTD5 131 aa7.59□□□□□ -1.19
DDX39A-213ENST00000590315 NAA38Q9BRA0 125 aaKnown RBP7.59□□□□□ -1.19
DDX39A-213ENST00000590315 LAMTOR3Q9UHA4 124 aa7.59□□□□□ -1.19
DDX39A-213ENST00000590315 DNAL4O96015 105 aa7.58□□□□□ -1.2
DDX39A-213ENST00000590315 FAM218AQ96MZ4 157 aa7.58□□□□□ -1.2
DDX39A-213ENST00000590315 DMBT1Q9UGM3 2413 aaPredicted RBP7.57□□□□□ -1.2
DDX39A-213ENST00000590315 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.57□□□□□ -1.2
DDX39A-213ENST00000590315 F8WEM9 126 aa7.56□□□□□ -1.2
DDX39A-213ENST00000590315 LINC00304Q8N9R0 145 aa7.56□□□□□ -1.2
DDX39A-213ENST00000590315 TNXBP22105 4242 aa7.55□□□□□ -1.2
DDX39A-213ENST00000590315 IGLV5-48A0A075B6I7 105 aa7.55□□□□□ -1.2
DDX39A-213ENST00000590315 SPRR1BP22528 89 aa7.55□□□□□ -1.2
DDX39A-213ENST00000590315 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms