RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TRAV23DV6A0A075B6W5 121 aa7.04□□□□□ -1.28
TPM4-212ENST00000590180 GAGE2AQ6NT46 116 aa7.04□□□□□ -1.28
TPM4-212ENST00000590180 LITAFQ99732 161 aa7.04□□□□□ -1.28
TPM4-212ENST00000590180 S100A2P29034 98 aa7.03□□□□□ -1.28
TPM4-212ENST00000590180 ANKRD39Q53RE8 183 aa7.03□□□□□ -1.28
TPM4-212ENST00000590180 SCGB1D4Q6XE38 83 aa7.03□□□□□ -1.28
TPM4-212ENST00000590180 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
TPM4-212ENST00000590180 ZNF73O43830 326 aaPredicted RBP7.02□□□□□ -1.29
TPM4-212ENST00000590180 ERC2-IT1O76042 136 aa7.02□□□□□ -1.29
TPM4-212ENST00000590180 HINT1P49773 126 aaPredicted RBP7.02□□□□□ -1.29
TPM4-212ENST00000590180 AKR1D1P51857 326 aa7.02□□□□□ -1.29
TPM4-212ENST00000590180 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
TPM4-212ENST00000590180 CBY1Q9Y3M2 126 aa7.02□□□□□ -1.29
TPM4-212ENST00000590180 S100A6P06703 90 aa7.01□□□□□ -1.29
TPM4-212ENST00000590180 JOSD1Q15040 202 aaPredicted RBP7.01□□□□□ -1.29
TPM4-212ENST00000590180 Q6ZRX8 168 aa7.01□□□□□ -1.29
TPM4-212ENST00000590180 LINC00518Q8N0U6 118 aa7□□□□□ -1.29
TPM4-212ENST00000590180 HIST3H2BBQ8N257 126 aa7□□□□□ -1.29
TPM4-212ENST00000590180 RETNLBQ9BQ08 111 aa7□□□□□ -1.29
TPM4-212ENST00000590180 Q9BRP9 147 aa7□□□□□ -1.29
TPM4-212ENST00000590180 SPAG11AQ6PDA7 123 aa6.99□□□□□ -1.29
TPM4-212ENST00000590180 PCP2Q8IVA1 136 aa6.99□□□□□ -1.29
TPM4-212ENST00000590180 HIST1H2BLQ99880 126 aa6.99□□□□□ -1.29
TPM4-212ENST00000590180 SNRPEP62304 92 aaKnown RBP6.98□□□□□ -1.29
TPM4-212ENST00000590180 Q8NBF4 154 aa6.98□□□□□ -1.29
TPM4-212ENST00000590180 COPS9Q8WXC6 57 aa6.98□□□□□ -1.29
TPM4-212ENST00000590180 SPANXDQ9BXN6 97 aa6.98□□□□□ -1.29
TPM4-212ENST00000590180 LPAP08519 4548 aa6.97□□□□□ -1.29
TPM4-212ENST00000590180 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
TPM4-212ENST00000590180 IFITM1P13164 125 aa6.97□□□□□ -1.29
TPM4-212ENST00000590180 LINC00483Q53H64 154 aa6.97□□□□□ -1.29
TPM4-212ENST00000590180 HSBP1L1C9JCN9 74 aa6.96□□□□□ -1.3
TPM4-212ENST00000590180 CTAG1AP78358 180 aa6.96□□□□□ -1.3
TPM4-212ENST00000590180 MUSTN1Q8IVN3 82 aa6.96□□□□□ -1.3
TPM4-212ENST00000590180 A6NDN8 102 aa6.95□□□□□ -1.3
TPM4-212ENST00000590180 MOBPQ13875 183 aa6.95□□□□□ -1.3
TPM4-212ENST00000590180 Q6ZVH6 145 aa6.95□□□□□ -1.3
TPM4-212ENST00000590180 ST20-AS1Q8NBB2 130 aa6.95□□□□□ -1.3
TPM4-212ENST00000590180 COX7BP24311 80 aa6.94□□□□□ -1.3
TPM4-212ENST00000590180 SSBP3-AS1Q7Z2R9 100 aa6.94□□□□□ -1.3
TPM4-212ENST00000590180 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
TPM4-212ENST00000590180 SCGB1D1O95968 90 aa6.93□□□□□ -1.3
TPM4-212ENST00000590180 C6orf99Q4VX62 202 aa6.93□□□□□ -1.3
TPM4-212ENST00000590180 DHRS4-AS1Q9P1J3 65 aa6.93□□□□□ -1.3
TPM4-212ENST00000590180 C5orf52A6NGY3 159 aa6.92□□□□□ -1.3
TPM4-212ENST00000590180 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
TPM4-212ENST00000590180 SPINK1P00995 79 aa6.91□□□□□ -1.3
TPM4-212ENST00000590180 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
TPM4-212ENST00000590180 TAL2Q16559 108 aa6.9□□□□□ -1.3
TPM4-212ENST00000590180 DEFB105AQ8NG35 78 aa6.9□□□□□ -1.3
TPM4-212ENST00000590180 TRAV13-2A0A0B4J235 113 aa6.89□□□□□ -1.31
TPM4-212ENST00000590180 ELOF1P60002 83 aaKnown RBP6.89□□□□□ -1.31
TPM4-212ENST00000590180 CDIP1Q9H305 208 aa6.89□□□□□ -1.31
TPM4-212ENST00000590180 SLC25A34Q6PIV7 304 aa6.88□□□□□ -1.31
TPM4-212ENST00000590180 LAMTOR3Q9UHA4 124 aa6.88□□□□□ -1.31
TPM4-212ENST00000590180 TRBV7-6A0A0J9YX20 115 aa6.87□□□□□ -1.31
TPM4-212ENST00000590180 A0A1B0GWB2 263 aa6.87□□□□□ -1.31
TPM4-212ENST00000590180 SPRR1BP22528 89 aa6.86□□□□□ -1.31
TPM4-212ENST00000590180 FP248Q71RG6 208 aaPredicted RBP6.86□□□□□ -1.31
TPM4-212ENST00000590180 TPRXLQ17RH7 258 aa6.85□□□□□ -1.31
TPM4-212ENST00000590180 SMIM11BQ8TCY0 68 aa6.85□□□□□ -1.31
TPM4-212ENST00000590180 TEX49A0A1B0GTD5 131 aa6.84□□□□□ -1.31
TPM4-212ENST00000590180 A4D1N5 150 aa6.84□□□□□ -1.31
TPM4-212ENST00000590180 SLC25A20O43772 301 aa6.84□□□□□ -1.31
TPM4-212ENST00000590180 VAMP3Q15836 100 aa6.84□□□□□ -1.31
TPM4-212ENST00000590180 Q1RN00 199 aa6.84□□□□□ -1.31
TPM4-212ENST00000590180 RPS29P62273 56 aaKnown RBP6.83□□□□□ -1.32
TPM4-212ENST00000590180 HRCT1Q6UXD1 115 aa6.83□□□□□ -1.32
TPM4-212ENST00000590180 HIST1H4GQ99525 98 aa6.83□□□□□ -1.32
TPM4-212ENST00000590180 COX8AP10176 69 aa6.82□□□□□ -1.32
TPM4-212ENST00000590180 Q8N377 158 aa6.82□□□□□ -1.32
TPM4-212ENST00000590180 NHP2Q9NX24 153 aaKnown RBP6.82□□□□□ -1.32
TPM4-212ENST00000590180 C14orf144Q96I85 54 aa6.81□□□□□ -1.32
TPM4-212ENST00000590180 C12orf57Q99622 126 aa6.8□□□□□ -1.32
TPM4-212ENST00000590180 PRO1933Q9H354 126 aa6.8□□□□□ -1.32
TPM4-212ENST00000590180 DLEU1O43261 78 aa6.79□□□□□ -1.32
TPM4-212ENST00000590180 SPATA45Q537H7 98 aa6.79□□□□□ -1.32
TPM4-212ENST00000590180 PAM16Q9Y3D7 125 aa6.79□□□□□ -1.32
TPM4-212ENST00000590180 LINC01547P58512 204 aaPredicted RBP6.78□□□□□ -1.32
TPM4-212ENST00000590180 KRTAP13-3Q3SY46 172 aa6.78□□□□□ -1.32
TPM4-212ENST00000590180 SMIM29Q86T20 159 aa6.78□□□□□ -1.32
TPM4-212ENST00000590180 IGLV5-48A0A075B6I7 105 aa6.77□□□□□ -1.33
TPM4-212ENST00000590180 LINC00575Q6W349 94 aa6.77□□□□□ -1.33
TPM4-212ENST00000590180 VAMP8Q9BV40 100 aa6.77□□□□□ -1.33
TPM4-212ENST00000590180 hADV29S1A0JD25 119 aa6.76□□□□□ -1.33
TPM4-212ENST00000590180 H7C2G1 150 aa6.76□□□□□ -1.33
TPM4-212ENST00000590180 LIMD2Q9BT23 127 aa6.76□□□□□ -1.33
TPM4-212ENST00000590180 A0A0G2JQZ4 141 aa6.74□□□□□ -1.33
TPM4-212ENST00000590180 CD164Q04900 197 aa6.74□□□□□ -1.33
TPM4-212ENST00000590180 RAB37Q96AX2 223 aa6.74□□□□□ -1.33
TPM4-212ENST00000590180 HIGD1BQ9P298 99 aa6.74□□□□□ -1.33
TPM4-212ENST00000590180 A0A0U1RQV1 116 aa6.73□□□□□ -1.33
TPM4-212ENST00000590180 F8WEM9 126 aa6.73□□□□□ -1.33
TPM4-212ENST00000590180 Q6ZQY7 126 aa6.73□□□□□ -1.33
TPM4-212ENST00000590180 CFC1BP0CG36 223 aa6.72□□□□□ -1.33
TPM4-212ENST00000590180 CFC1P0CG37 223 aa6.72□□□□□ -1.33
TPM4-212ENST00000590180 BVES-AS1Q5T3Y7 98 aa6.72□□□□□ -1.33
TPM4-212ENST00000590180 MUC2Q02817 5179 aa6.71□□□□□ -1.34
TPM4-212ENST00000590180 C2orf91Q6ZV80 131 aa6.7□□□□□ -1.34
TPM4-212ENST00000590180 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms