RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 KCNQ1DNQ9H478 68 aa11□□□□□ -0.65
CXXC1-212ENST00000589940 PKHD1P08F94 4074 aa11□□□□□ -0.65
CXXC1-212ENST00000589940 TRBV20-1A0A075B6N2 111 aa11□□□□□ -0.65
CXXC1-212ENST00000589940 EPM2AB3EWF7 344 aa11□□□□□ -0.65
CXXC1-212ENST00000589940 A0A087WYN8 130 aa10.99□□□□□ -0.65
CXXC1-212ENST00000589940 ZNF73O43830 326 aaPredicted RBP10.99□□□□□ -0.65
CXXC1-212ENST00000589940 TCL1BO95988 128 aa10.99□□□□□ -0.65
CXXC1-212ENST00000589940 CLEC2BQ92478 149 aa10.98□□□□□ -0.65
CXXC1-212ENST00000589940 H0YGX0 51 aa10.97□□□□□ -0.65
CXXC1-212ENST00000589940 DIRC1Q969H9 104 aa10.97□□□□□ -0.65
CXXC1-212ENST00000589940 PHF5AQ7RTV0 110 aaKnown RBP10.97□□□□□ -0.65
CXXC1-212ENST00000589940 A0A1B0GVY2 172 aa10.96□□□□□ -0.65
CXXC1-212ENST00000589940 PRYO14603 147 aa10.96□□□□□ -0.65
CXXC1-212ENST00000589940 KRTAP10-1P60331 282 aa10.96□□□□□ -0.65
CXXC1-212ENST00000589940 PLAC8Q9NZF1 115 aa10.96□□□□□ -0.65
CXXC1-212ENST00000589940 ATXN8Q156A1 80 aa10.95□□□□□ -0.66
CXXC1-212ENST00000589940 H3BMG7 143 aa10.94□□□□□ -0.66
CXXC1-212ENST00000589940 LST1O00453 97 aa10.94□□□□□ -0.66
CXXC1-212ENST00000589940 TRBV7-6A0A0J9YX20 115 aa10.94□□□□□ -0.66
CXXC1-212ENST00000589940 SCGB1A1P11684 91 aa10.93□□□□□ -0.66
CXXC1-212ENST00000589940 Q6ZSA8 131 aa10.93□□□□□ -0.66
CXXC1-212ENST00000589940 FAM218AQ96MZ4 157 aa10.93□□□□□ -0.66
CXXC1-212ENST00000589940 FAM30AQ9NZY2 134 aa10.93□□□□□ -0.66
CXXC1-212ENST00000589940 UBE2BP63146 152 aa10.93□□□□□ -0.66
CXXC1-212ENST00000589940 SPRR1AP35321 89 aa10.92□□□□□ -0.66
CXXC1-212ENST00000589940 LRP1BQ9NZR2 4599 aa10.92□□□□□ -0.66
CXXC1-212ENST00000589940 COX7BP24311 80 aa10.91□□□□□ -0.66
CXXC1-212ENST00000589940 ELOF1P60002 83 aaKnown RBP10.91□□□□□ -0.66
CXXC1-212ENST00000589940 REG3GQ6UW15 175 aa10.91□□□□□ -0.66
CXXC1-212ENST00000589940 DYNC1H1Q14204 4646 aaKnown RBP10.9□□□□□ -0.66
CXXC1-212ENST00000589940 KRTAP4-16G5E9R7 235 aaPredicted RBP10.9□□□□□ -0.66
CXXC1-212ENST00000589940 KRTAP11-1Q8IUC1 163 aa10.89□□□□□ -0.67
CXXC1-212ENST00000589940 TRACP01848 142 aa10.89□□□□□ -0.67
CXXC1-212ENST00000589940 LINC00575Q6W349 94 aa10.88□□□□□ -0.67
CXXC1-212ENST00000589940 A0A1B0GV72 72 aa10.88□□□□□ -0.67
CXXC1-212ENST00000589940 ETDCA0A1B0GVM5 59 aa10.88□□□□□ -0.67
CXXC1-212ENST00000589940 CIRBP-AS1Q8TBR5 109 aa10.88□□□□□ -0.67
CXXC1-212ENST00000589940 SIGMAR1Q99720 223 aa10.88□□□□□ -0.67
CXXC1-212ENST00000589940 A0A1B0GX51 115 aa10.87□□□□□ -0.67
CXXC1-212ENST00000589940 LINC00528Q8N1L1 170 aa10.87□□□□□ -0.67
CXXC1-212ENST00000589940 B5MCH6 92 aa10.86□□□□□ -0.67
CXXC1-212ENST00000589940 SCXQ7RTU7 201 aa10.86□□□□□ -0.67
CXXC1-212ENST00000589940 Q6ZRX8 168 aa10.85□□□□□ -0.67
CXXC1-212ENST00000589940 SNCGO76070 127 aa10.85□□□□□ -0.67
CXXC1-212ENST00000589940 C9JAW5 83 aa10.84□□□□□ -0.67
CXXC1-212ENST00000589940 SLC25A20O43772 301 aa10.84□□□□□ -0.67
CXXC1-212ENST00000589940 DNAL4O96015 105 aa10.84□□□□□ -0.67
CXXC1-212ENST00000589940 MTURNQ8N3F0 131 aa10.84□□□□□ -0.67
CXXC1-212ENST00000589940 hADV29S1A0JD25 119 aa10.84□□□□□ -0.67
CXXC1-212ENST00000589940 PRO0461Q9UI25 63 aa10.83□□□□□ -0.68
CXXC1-212ENST00000589940 F8W1H4 67 aa10.81□□□□□ -0.68
CXXC1-212ENST00000589940 INAFM2P0DMQ5 153 aa10.81□□□□□ -0.68
CXXC1-212ENST00000589940 FAM19A1Q7Z5A9 133 aa10.81□□□□□ -0.68
CXXC1-212ENST00000589940 HAMPP81172 84 aa10.8□□□□□ -0.68
CXXC1-212ENST00000589940 Q9BRP9 147 aa10.8□□□□□ -0.68
CXXC1-212ENST00000589940 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
CXXC1-212ENST00000589940 J3QR89 54 aa10.8□□□□□ -0.68
CXXC1-212ENST00000589940 BCE1O60756 84 aa10.8□□□□□ -0.68
CXXC1-212ENST00000589940 PSORS1C2Q9UIG4 136 aa10.79□□□□□ -0.68
CXXC1-212ENST00000589940 SMCPP49901 116 aaPredicted RBP10.78□□□□□ -0.68
CXXC1-212ENST00000589940 PRLHP81277 87 aa10.78□□□□□ -0.68
CXXC1-212ENST00000589940 H0Y9J4 135 aa10.77□□□□□ -0.68
CXXC1-212ENST00000589940 H3BT86 120 aa10.77□□□□□ -0.69
CXXC1-212ENST00000589940 Q6ZQY7 126 aa10.77□□□□□ -0.69
CXXC1-212ENST00000589940 ORMDL1Q9P0S3 153 aa10.77□□□□□ -0.69
CXXC1-212ENST00000589940 APOBP04114 4563 aaKnown RBP10.77□□□□□ -0.69
CXXC1-212ENST00000589940 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.76□□□□□ -0.69
CXXC1-212ENST00000589940 ANKRD29Q8N6D5 301 aa10.76□□□□□ -0.69
CXXC1-212ENST00000589940 BAALC-AS2P0C853 105 aa10.76□□□□□ -0.69
CXXC1-212ENST00000589940 UBE2AP49459 152 aa10.76□□□□□ -0.69
CXXC1-212ENST00000589940 SMCR5Q8TEV8 140 aa10.76□□□□□ -0.69
CXXC1-212ENST00000589940 LINC01600Q96MT4 127 aa10.74□□□□□ -0.69
CXXC1-212ENST00000589940 C1orf137Q5JT78 98 aa10.74□□□□□ -0.69
CXXC1-212ENST00000589940 KRTAP13-1Q8IUC0 172 aa10.74□□□□□ -0.69
CXXC1-212ENST00000589940 HIGD2AQ9BW72 106 aa10.73□□□□□ -0.69
CXXC1-212ENST00000589940 ERC2-IT1O76042 136 aa10.72□□□□□ -0.69
CXXC1-212ENST00000589940 XGP55808 180 aa10.71□□□□□ -0.69
CXXC1-212ENST00000589940 TMEM256-PLSCR3K7ERE1 68 aa10.7□□□□□ -0.7
CXXC1-212ENST00000589940 GHRHP01286 108 aa10.7□□□□□ -0.7
CXXC1-212ENST00000589940 SRRM2Q9UQ35 2752 aaKnown RBP10.69□□□□□ -0.7
CXXC1-212ENST00000589940 H3BQ85 93 aa10.69□□□□□ -0.7
CXXC1-212ENST00000589940 ETDBQ3ZM63 59 aa10.69□□□□□ -0.7
CXXC1-212ENST00000589940 VPS13BQ7Z7G8 4022 aa10.69□□□□□ -0.7
CXXC1-212ENST00000589940 ST20-AS1Q8NBB2 130 aa10.68□□□□□ -0.7
CXXC1-212ENST00000589940 ZNF861PO60384 105 aa10.66□□□□□ -0.7
CXXC1-212ENST00000589940 IGLV7-43P04211 117 aa10.66□□□□□ -0.7
CXXC1-212ENST00000589940 TEN1Q86WV5 123 aa10.66□□□□□ -0.7
CXXC1-212ENST00000589940 IGLV5-48A0A075B6I7 105 aa10.65□□□□□ -0.7
CXXC1-212ENST00000589940 LINC01547P58512 204 aaPredicted RBP10.65□□□□□ -0.7
CXXC1-212ENST00000589940 DEFB105AQ8NG35 78 aa10.65□□□□□ -0.71
CXXC1-212ENST00000589940 PPDPFLQ8WWR9 84 aa10.64□□□□□ -0.71
CXXC1-212ENST00000589940 Q8N377 158 aa10.64□□□□□ -0.71
CXXC1-212ENST00000589940 EPPK1P58107 5090 aaKnown RBP10.61□□□□□ -0.71
CXXC1-212ENST00000589940 TEX49A0A1B0GTD5 131 aa10.61□□□□□ -0.71
CXXC1-212ENST00000589940 LAMTOR3Q9UHA4 124 aa10.6□□□□□ -0.71
CXXC1-212ENST00000589940 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
CXXC1-212ENST00000589940 CDIP1Q9H305 208 aa10.59□□□□□ -0.71
CXXC1-212ENST00000589940 FAT1Q14517 4588 aa10.59□□□□□ -0.71
CXXC1-212ENST00000589940 OBSCN-AS1Q96MR7 158 aa10.58□□□□□ -0.72
CXXC1-212ENST00000589940 NDUFV3P56181 108 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms