RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 TRRAPQ9Y4A5 3859 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 COL7A1Q02388 2944 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 LINC00959A0A1B0GUT2 108 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 A0A1B0GUV1 79 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 F8WEM9 126 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 H7BZZ5 65 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 ERC2-IT1O76042 136 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 LINC01547P58512 204 aaPredicted RBP2.31□□□□□ -2.04
LINC01539-203ENST00000589447 HAMPP81172 84 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 DEFB136Q30KP8 78 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 DEFB113Q30KQ7 82 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 ODF3L2Q3SX64 289 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 C9orf66Q5T8R8 295 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 LINC00575Q6W349 94 aa2.31□□□□□ -2.04
LINC01539-203ENST00000589447 C11orf68Q9H3H3 251 aaKnown RBP2.31□□□□□ -2.04
LINC01539-203ENST00000589447 NOP10Q9NPE3 64 aaKnown RBP2.31□□□□□ -2.04
LINC01539-203ENST00000589447 NBEAL2Q6ZNJ1 2754 aa2.3□□□□□ -2.04
LINC01539-203ENST00000589447 IGLV4-60A0A075B6I1 120 aa2.3□□□□□ -2.04
LINC01539-203ENST00000589447 A0A096LNT2 108 aa2.3□□□□□ -2.04
LINC01539-203ENST00000589447 H0Y9J4 135 aa2.3□□□□□ -2.04
LINC01539-203ENST00000589447 FSHBP01225 129 aa2.3□□□□□ -2.04
LINC01539-203ENST00000589447 MIFP14174 115 aa2.3□□□□□ -2.04
LINC01539-203ENST00000589447 NANOS2P60321 138 aaKnown RBP2.3□□□□□ -2.04
LINC01539-203ENST00000589447 PRR3P79522 188 aaKnown RBP2.3□□□□□ -2.04
LINC01539-203ENST00000589447 NREPQ16612 68 aa2.3□□□□□ -2.04
LINC01539-203ENST00000589447 C6orf99Q4VX62 202 aa2.3□□□□□ -2.04
LINC01539-203ENST00000589447 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.3□□□□□ -2.04
LINC01539-203ENST00000589447 WFDC9Q8NEX5 89 aa2.3□□□□□ -2.04
LINC01539-203ENST00000589447 CHCHD10Q8WYQ3 142 aaPredicted RBP2.3□□□□□ -2.04
LINC01539-203ENST00000589447 DIRC1Q969H9 104 aa2.3□□□□□ -2.04
LINC01539-203ENST00000589447 CMYA5Q8N3K9 4069 aa2.3□□□□□ -2.04
LINC01539-203ENST00000589447 TRBV7-6A0A0J9YX20 115 aa2.29□□□□□ -2.04
LINC01539-203ENST00000589447 KRTAP24-1Q3LI83 254 aa2.29□□□□□ -2.04
LINC01539-203ENST00000589447 C18orf65Q6ZTR6 163 aa2.29□□□□□ -2.04
LINC01539-203ENST00000589447 RMI2Q96E14 147 aa2.29□□□□□ -2.04
LINC01539-203ENST00000589447 TRBV7-4A0A0J9YYF1 115 aa2.28□□□□□ -2.04
LINC01539-203ENST00000589447 PLAC8L1A1L4L8 177 aa2.28□□□□□ -2.04
LINC01539-203ENST00000589447 COX7BP24311 80 aa2.28□□□□□ -2.04
LINC01539-203ENST00000589447 SPAG11BQ08648 103 aa2.28□□□□□ -2.04
LINC01539-203ENST00000589447 Q6ZQY7 126 aa2.28□□□□□ -2.04
LINC01539-203ENST00000589447 TMEM254Q8TBM7 123 aa2.28□□□□□ -2.04
LINC01539-203ENST00000589447 SNURFQ9Y675 71 aa2.28□□□□□ -2.04
LINC01539-203ENST00000589447 TRAV10A0A0B4J240 114 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 BPY2O14599 106 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 PSPHP1O15172 72 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 IGLV6-57P01721 117 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 FUSP35637 526 aaKnown RBP eCLIP2.27□□□□□ -2.05
LINC01539-203ENST00000589447 KRTAP10-2P60368 255 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 DAD1P61803 113 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 PMAIP1Q13794 54 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 KIAA0087Q14695 138 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 ESRGQ1W209 222 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 CLPSL2Q6UWE3 100 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 FP248Q71RG6 208 aaPredicted RBP2.27□□□□□ -2.05
LINC01539-203ENST00000589447 LINC00612Q8N6U2 182 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 NKAPP1Q8N9T2 125 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 BRK1Q8WUW1 75 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 TM2D3Q9BRN9 247 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 C16orf95Q9H693 158 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 PRO0255Q9UI72 69 aa2.27□□□□□ -2.05
LINC01539-203ENST00000589447 GVQW2A0A096LPI5 108 aaPredicted RBP2.26□□□□□ -2.05
LINC01539-203ENST00000589447 A0A0J9YWU9 116 aa2.26□□□□□ -2.05
LINC01539-203ENST00000589447 A0A1B0GW54 56 aa2.26□□□□□ -2.05
LINC01539-203ENST00000589447 DNAJC9-AS1A6NH13 148 aa2.26□□□□□ -2.05
LINC01539-203ENST00000589447 ZNF73O43830 326 aaPredicted RBP2.26□□□□□ -2.05
LINC01539-203ENST00000589447 NDUFS5O43920 106 aa2.26□□□□□ -2.05
LINC01539-203ENST00000589447 ANGP03950 147 aaKnown RBP2.26□□□□□ -2.05
LINC01539-203ENST00000589447 DEFB130BP0DP73 79 aa2.26□□□□□ -2.05
LINC01539-203ENST00000589447 DEFB130AP0DP74 79 aa2.26□□□□□ -2.05
LINC01539-203ENST00000589447 ELOF1P60002 83 aaKnown RBP2.26□□□□□ -2.05
LINC01539-203ENST00000589447 REG3AQ06141 175 aa2.26□□□□□ -2.05
LINC01539-203ENST00000589447 LINC00269Q8N2A0 174 aa2.26□□□□□ -2.05
LINC01539-203ENST00000589447 CSNK1G2-AS1Q8NCQ2 148 aa2.26□□□□□ -2.05
LINC01539-203ENST00000589447 PKIGQ9Y2B9 76 aa2.26□□□□□ -2.05
LINC01539-203ENST00000589447 SORL1Q92673 2214 aa2.26□□□□□ -2.05
LINC01539-203ENST00000589447 C8orf87E5RJ46 101 aa2.25□□□□□ -2.05
LINC01539-203ENST00000589447 M0R2N4 97 aa2.25□□□□□ -2.05
LINC01539-203ENST00000589447 IGLV1-51P01701 117 aa2.25□□□□□ -2.05
LINC01539-203ENST00000589447 IGKV4-1P06312 121 aa2.25□□□□□ -2.05
LINC01539-203ENST00000589447 GIG44P09565 113 aaPredicted RBP2.25□□□□□ -2.05
LINC01539-203ENST00000589447 HIGD2BQ4VC39 106 aa2.25□□□□□ -2.05
LINC01539-203ENST00000589447 SCXQ7RTU7 201 aa2.25□□□□□ -2.05
LINC01539-203ENST00000589447 OCR1Q9BZK8 76 aa2.25□□□□□ -2.05
LINC01539-203ENST00000589447 NOTCH3Q9UM47 2321 aa2.25□□□□□ -2.05
LINC01539-203ENST00000589447 TENM3Q9P273 2699 aa2.24□□□□□ -2.05
LINC01539-203ENST00000589447 IGLV10-54A0A075B6I4 117 aa2.24□□□□□ -2.05
LINC01539-203ENST00000589447 M0R378 163 aa2.24□□□□□ -2.05
LINC01539-203ENST00000589447 PRR4Q16378 134 aa2.24□□□□□ -2.05
LINC01539-203ENST00000589447 C9orf116Q5BN46 136 aaPredicted RBP2.24□□□□□ -2.05
LINC01539-203ENST00000589447 PRR15Q8IV56 129 aa2.24□□□□□ -2.05
LINC01539-203ENST00000589447 LINC01006Q8NI28 216 aa2.24□□□□□ -2.05
LINC01539-203ENST00000589447 KRTAP3-1Q9BYR8 98 aa2.24□□□□□ -2.05
LINC01539-203ENST00000589447 LINC00474Q9P2X8 69 aa2.24□□□□□ -2.05
LINC01539-203ENST00000589447 KMT2CQ8NEZ4 4911 aaKnown RBP2.23□□□□□ -2.05
LINC01539-203ENST00000589447 A0A096LPF7 62 aa2.23□□□□□ -2.05
LINC01539-203ENST00000589447 NDUFB1O75438 58 aa2.23□□□□□ -2.05
LINC01539-203ENST00000589447 LELP1Q5T871 98 aa2.23□□□□□ -2.05
LINC01539-203ENST00000589447 UNQ6190/PRO20217Q6UXQ8 127 aa2.23□□□□□ -2.05
LINC01539-203ENST00000589447 Q8NDZ9 215 aa2.23□□□□□ -2.05
LINC01539-203ENST00000589447 WFDC10AQ9H1F0 79 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms