RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 NCMAPQ5T1S8 102 aa1.66□□□□□ -2.14
TUBD1-208ENST00000588009 C9orf153Q5TBE3 101 aa1.66□□□□□ -2.14
TUBD1-208ENST00000588009 NDUFA11Q86Y39 141 aa1.66□□□□□ -2.14
TUBD1-208ENST00000588009 DEFB104AQ8WTQ1 72 aa1.66□□□□□ -2.14
TUBD1-208ENST00000588009 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
TUBD1-208ENST00000588009 TRAV12-3A0A0B4J271 114 aa1.65□□□□□ -2.15
TUBD1-208ENST00000588009 HIGD1CA8MV81 97 aa1.65□□□□□ -2.15
TUBD1-208ENST00000588009 CBLN1P23435 193 aa1.65□□□□□ -2.15
TUBD1-208ENST00000588009 RBM3P98179 157 aaKnown RBP1.65□□□□□ -2.15
TUBD1-208ENST00000588009 HSD52Q0P140 79 aa1.65□□□□□ -2.15
TUBD1-208ENST00000588009 DEFB110Q30KQ9 67 aa1.65□□□□□ -2.15
TUBD1-208ENST00000588009 UQCRHLA0A096LP55 91 aa1.64□□□□□ -2.15
TUBD1-208ENST00000588009 TCRBV3S1A0A5B6 114 aa1.64□□□□□ -2.15
TUBD1-208ENST00000588009 DEFB112Q30KQ8 113 aa1.64□□□□□ -2.15
TUBD1-208ENST00000588009 C12orf73Q69YU5 71 aa1.64□□□□□ -2.15
TUBD1-208ENST00000588009 LYNX1G3V0Z9 82 aa1.63□□□□□ -2.15
TUBD1-208ENST00000588009 FXYD3Q14802 87 aa1.63□□□□□ -2.15
TUBD1-208ENST00000588009 SPTSSBQ8NFR3 76 aa1.63□□□□□ -2.15
TUBD1-208ENST00000588009 LPAP08519 4548 aa1.62□□□□□ -2.15
TUBD1-208ENST00000588009 HAMPP81172 84 aa1.62□□□□□ -2.15
TUBD1-208ENST00000588009 RPL7L1Q6DKI1 246 aaKnown RBP1.62□□□□□ -2.15
TUBD1-208ENST00000588009 GTF2H5Q6ZYL4 71 aa1.62□□□□□ -2.15
TUBD1-208ENST00000588009 C5orf56Q8N8D9 126 aa1.62□□□□□ -2.15
TUBD1-208ENST00000588009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.61□□□□□ -2.15
TUBD1-208ENST00000588009 TRAV30A0A087WSZ9 112 aa1.61□□□□□ -2.15
TUBD1-208ENST00000588009 TMEM218A2RU14 115 aa1.61□□□□□ -2.15
TUBD1-208ENST00000588009 IFITM1P13164 125 aa1.61□□□□□ -2.15
TUBD1-208ENST00000588009 XAF1Q6GPH4 301 aa1.61□□□□□ -2.15
TUBD1-208ENST00000588009 LINC00208Q96KT6 92 aa1.61□□□□□ -2.15
TUBD1-208ENST00000588009 KRTAP2-1Q9BYU5 128 aa1.61□□□□□ -2.15
TUBD1-208ENST00000588009 MUC12Q9UKN1 5478 aa1.61□□□□□ -2.15
TUBD1-208ENST00000588009 TNXBP22105 4242 aa1.6□□□□□ -2.15
TUBD1-208ENST00000588009 TRBV10-3A0A0K0K1G6 114 aa1.6□□□□□ -2.15
TUBD1-208ENST00000588009 A6NIN4 97 aa1.6□□□□□ -2.15
TUBD1-208ENST00000588009 SPINK8P0C7L1 97 aa1.6□□□□□ -2.15
TUBD1-208ENST00000588009 UBE2D1P51668 147 aa1.6□□□□□ -2.15
TUBD1-208ENST00000588009 LINC00575Q6W349 94 aa1.6□□□□□ -2.15
TUBD1-208ENST00000588009 C8orf59Q8N0T1 100 aaPredicted RBP1.6□□□□□ -2.15
TUBD1-208ENST00000588009 SPANXDQ9BXN6 97 aa1.6□□□□□ -2.15
TUBD1-208ENST00000588009 HCG22E2RYF7 251 aa1.59□□□□□ -2.15
TUBD1-208ENST00000588009 S100A8P05109 93 aa1.59□□□□□ -2.15
TUBD1-208ENST00000588009 MT1HL1P0DM35 61 aa1.59□□□□□ -2.15
TUBD1-208ENST00000588009 C5orf38Q86SI9 138 aa1.59□□□□□ -2.15
TUBD1-208ENST00000588009 SVBPQ8N300 66 aa1.59□□□□□ -2.15
TUBD1-208ENST00000588009 DEFB108BQ8NET1 73 aa1.59□□□□□ -2.15
TUBD1-208ENST00000588009 DPH3P1Q9H4G8 78 aa1.59□□□□□ -2.15
TUBD1-208ENST00000588009 TEX49A0A1B0GTD5 131 aa1.58□□□□□ -2.16
TUBD1-208ENST00000588009 IFNA17P01571 189 aa1.58□□□□□ -2.16
TUBD1-208ENST00000588009 CCL8P80075 99 aa1.58□□□□□ -2.16
TUBD1-208ENST00000588009 CYP2G1PQ6ZSU1 146 aa1.58□□□□□ -2.16
TUBD1-208ENST00000588009 ACBD7Q8N6N7 88 aa1.58□□□□□ -2.16
TUBD1-208ENST00000588009 Q6ZQY7 126 aa1.57□□□□□ -2.16
TUBD1-208ENST00000588009 C20orf197Q8N268 126 aa1.57□□□□□ -2.16
TUBD1-208ENST00000588009 LINC00474Q9P2X8 69 aa1.57□□□□□ -2.16
TUBD1-208ENST00000588009 TRAV13-2A0A0B4J235 113 aa1.56□□□□□ -2.16
TUBD1-208ENST00000588009 CCL3L1P16619 93 aa1.56□□□□□ -2.16
TUBD1-208ENST00000588009 ZNF818PQ6ZRF7 136 aa1.56□□□□□ -2.16
TUBD1-208ENST00000588009 COMMD6Q7Z4G1 85 aa1.56□□□□□ -2.16
TUBD1-208ENST00000588009 TTC9CQ8N5M4 171 aa1.56□□□□□ -2.16
TUBD1-208ENST00000588009 A0A087WTM6 91 aa1.55□□□□□ -2.16
TUBD1-208ENST00000588009 FAM24AA6NFZ4 105 aa1.55□□□□□ -2.16
TUBD1-208ENST00000588009 SIX6O95475 246 aa1.55□□□□□ -2.16
TUBD1-208ENST00000588009 MPC2O95563 127 aa1.55□□□□□ -2.16
TUBD1-208ENST00000588009 Q86TA4 180 aa1.55□□□□□ -2.16
TUBD1-208ENST00000588009 Q8N6K4 173 aa1.55□□□□□ -2.16
TUBD1-208ENST00000588009 LINC00312Q9Y6C7 94 aa1.55□□□□□ -2.16
TUBD1-208ENST00000588009 UBE2L5PA0A1B0GUS4 154 aa1.54□□□□□ -2.16
TUBD1-208ENST00000588009 RBAKDNA6NC62 111 aa1.54□□□□□ -2.16
TUBD1-208ENST00000588009 M0R143 59 aa1.54□□□□□ -2.16
TUBD1-208ENST00000588009 CAV3P56539 151 aa1.54□□□□□ -2.16
TUBD1-208ENST00000588009 ELOF1P60002 83 aaKnown RBP1.54□□□□□ -2.16
TUBD1-208ENST00000588009 S100A10P60903 97 aa1.54□□□□□ -2.16
TUBD1-208ENST00000588009 UBE2L3P68036 154 aaKnown RBP1.54□□□□□ -2.16
TUBD1-208ENST00000588009 ZNF56Q15929 161 aa1.54□□□□□ -2.16
TUBD1-208ENST00000588009 COX14Q96I36 57 aa1.54□□□□□ -2.16
TUBD1-208ENST00000588009 AQP10Q96PS8 301 aa1.54□□□□□ -2.16
TUBD1-208ENST00000588009 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
TUBD1-208ENST00000588009 PIGBOS1A0A0B4J2F0 54 aa1.53□□□□□ -2.16
TUBD1-208ENST00000588009 A0A0D9SFI3 127 aa1.53□□□□□ -2.16
TUBD1-208ENST00000588009 TMEM262E9PQX1 116 aa1.53□□□□□ -2.16
TUBD1-208ENST00000588009 H3BQF6 201 aa1.53□□□□□ -2.16
TUBD1-208ENST00000588009 FXYD1O00168 92 aa1.53□□□□□ -2.16
TUBD1-208ENST00000588009 SSSCA1O60232 199 aa1.53□□□□□ -2.16
TUBD1-208ENST00000588009 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
TUBD1-208ENST00000588009 LCN9Q8WX39 176 aa1.53□□□□□ -2.16
TUBD1-208ENST00000588009 PKIAP61925 76 aa1.52□□□□□ -2.17
TUBD1-208ENST00000588009 KLKP1Q107X0 134 aa1.52□□□□□ -2.17
TUBD1-208ENST00000588009 C4orf33Q8N1A6 199 aa1.52□□□□□ -2.17
TUBD1-208ENST00000588009 COX7B2Q8TF08 81 aa1.52□□□□□ -2.17
TUBD1-208ENST00000588009 DYNLRB1Q9NP97 96 aa1.52□□□□□ -2.17
TUBD1-208ENST00000588009 APLNQ9ULZ1 77 aa1.52□□□□□ -2.17
TUBD1-208ENST00000588009 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
TUBD1-208ENST00000588009 TRBV7-1A0A0A6YYK4 115 aa1.51□□□□□ -2.17
TUBD1-208ENST00000588009 TRBV30A0A0K0K1B3 111 aa1.51□□□□□ -2.17
TUBD1-208ENST00000588009 A0A1W2PPM0 123 aa1.51□□□□□ -2.17
TUBD1-208ENST00000588009 H3BSH0 61 aa1.51□□□□□ -2.17
TUBD1-208ENST00000588009 GNG11P61952 73 aa1.51□□□□□ -2.17
TUBD1-208ENST00000588009 SSBP1Q04837 148 aaKnown RBP1.51□□□□□ -2.17
TUBD1-208ENST00000588009 TSLPQ969D9 159 aa1.51□□□□□ -2.17
TUBD1-208ENST00000588009 SNHG12Q9BXW3 62 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms