RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 FXYD2P54710 66 aa6.5□□□□□ -1.37
SMARCA4-213ENST00000587988 PRLHP81277 87 aa6.5□□□□□ -1.37
SMARCA4-213ENST00000587988 SPINK6Q6UWN8 80 aa6.5□□□□□ -1.37
SMARCA4-213ENST00000587988 SRRM2Q9UQ35 2752 aaKnown RBP6.5□□□□□ -1.37
SMARCA4-213ENST00000587988 TRAV13-2A0A0B4J235 113 aa6.49□□□□□ -1.37
SMARCA4-213ENST00000587988 CFC1BP0CG36 223 aa6.49□□□□□ -1.37
SMARCA4-213ENST00000587988 CFC1P0CG37 223 aa6.49□□□□□ -1.37
SMARCA4-213ENST00000587988 HSD52Q0P140 79 aa6.49□□□□□ -1.37
SMARCA4-213ENST00000587988 B5MCH6 92 aa6.48□□□□□ -1.37
SMARCA4-213ENST00000587988 ZNF73O43830 326 aaPredicted RBP6.48□□□□□ -1.37
SMARCA4-213ENST00000587988 RPL28P46779 137 aaKnown RBP6.48□□□□□ -1.37
SMARCA4-213ENST00000587988 ETDCA0A1B0GVM5 59 aa6.47□□□□□ -1.37
SMARCA4-213ENST00000587988 H0Y9J4 135 aa6.46□□□□□ -1.38
SMARCA4-213ENST00000587988 RPL13AP40429 203 aaKnown RBP6.46□□□□□ -1.38
SMARCA4-213ENST00000587988 CTAG1AP78358 180 aa6.46□□□□□ -1.38
SMARCA4-213ENST00000587988 C6orf99Q4VX62 202 aa6.46□□□□□ -1.38
SMARCA4-213ENST00000587988 SMIM11BQ8TCY0 68 aa6.46□□□□□ -1.38
SMARCA4-213ENST00000587988 DIRC1Q969H9 104 aa6.46□□□□□ -1.38
SMARCA4-213ENST00000587988 FLG2Q5D862 2391 aaPredicted RBP6.46□□□□□ -1.38
SMARCA4-213ENST00000587988 A0A0B4J2C4 111 aa6.45□□□□□ -1.38
SMARCA4-213ENST00000587988 TSTD3H0UI37 97 aa6.45□□□□□ -1.38
SMARCA4-213ENST00000587988 SMCR5Q8TEV8 140 aa6.45□□□□□ -1.38
SMARCA4-213ENST00000587988 Q9BRP9 147 aa6.45□□□□□ -1.38
SMARCA4-213ENST00000587988 HIGD2AQ9BW72 106 aa6.45□□□□□ -1.38
SMARCA4-213ENST00000587988 CBY1Q9Y3M2 126 aa6.45□□□□□ -1.38
SMARCA4-213ENST00000587988 TMEM238LA0A1B0GVL6 79 aa6.44□□□□□ -1.38
SMARCA4-213ENST00000587988 A6NJY4 79 aa6.44□□□□□ -1.38
SMARCA4-213ENST00000587988 BVES-AS1Q5T3Y7 98 aa6.44□□□□□ -1.38
SMARCA4-213ENST00000587988 Q6ZRX8 168 aa6.44□□□□□ -1.38
SMARCA4-213ENST00000587988 RAB37Q96AX2 223 aa6.44□□□□□ -1.38
SMARCA4-213ENST00000587988 ABCA13Q86UQ4 5058 aa6.44□□□□□ -1.38
SMARCA4-213ENST00000587988 H7C2G1 150 aa6.43□□□□□ -1.38
SMARCA4-213ENST00000587988 ERC2-IT1O76042 136 aa6.43□□□□□ -1.38
SMARCA4-213ENST00000587988 KRTAP1-4P0C5Y4 121 aa6.43□□□□□ -1.38
SMARCA4-213ENST00000587988 NHP2Q9NX24 153 aaKnown RBP6.43□□□□□ -1.38
SMARCA4-213ENST00000587988 K7ERJ3 54 aa6.42□□□□□ -1.38
SMARCA4-213ENST00000587988 COX7BP24311 80 aa6.42□□□□□ -1.38
SMARCA4-213ENST00000587988 HINT1P49773 126 aaPredicted RBP6.42□□□□□ -1.38
SMARCA4-213ENST00000587988 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
SMARCA4-213ENST00000587988 LRP1Q07954 4544 aaKnown RBP6.42□□□□□ -1.38
SMARCA4-213ENST00000587988 A0A1B0GWB2 263 aa6.41□□□□□ -1.38
SMARCA4-213ENST00000587988 PRO1854Q9UHT4 67 aa6.41□□□□□ -1.38
SMARCA4-213ENST00000587988 FAT3Q8TDW7 4589 aa6.41□□□□□ -1.38
SMARCA4-213ENST00000587988 TRBV7-6A0A0J9YX20 115 aa6.4□□□□□ -1.38
SMARCA4-213ENST00000587988 ANAPC11Q9NYG5 84 aa6.4□□□□□ -1.38
SMARCA4-213ENST00000587988 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
SMARCA4-213ENST00000587988 KRTAP29-1A8MX34 341 aaPredicted RBP6.39□□□□□ -1.39
SMARCA4-213ENST00000587988 OXTP01178 125 aa6.39□□□□□ -1.39
SMARCA4-213ENST00000587988 LINC01600Q96MT4 127 aa6.39□□□□□ -1.39
SMARCA4-213ENST00000587988 M0R143 59 aa6.38□□□□□ -1.39
SMARCA4-213ENST00000587988 Q1RN00 199 aa6.38□□□□□ -1.39
SMARCA4-213ENST00000587988 SPRR4Q96PI1 79 aa6.38□□□□□ -1.39
SMARCA4-213ENST00000587988 MT1HL1P0DM35 61 aa6.37□□□□□ -1.39
SMARCA4-213ENST00000587988 PRR26Q8N8Z3 221 aa6.37□□□□□ -1.39
SMARCA4-213ENST00000587988 ST20-AS1Q8NBB2 130 aa6.37□□□□□ -1.39
SMARCA4-213ENST00000587988 DHRS4-AS1Q9P1J3 65 aa6.37□□□□□ -1.39
SMARCA4-213ENST00000587988 A0A087X002 238 aa6.36□□□□□ -1.39
SMARCA4-213ENST00000587988 TSPAN13O95857 204 aa6.36□□□□□ -1.39
SMARCA4-213ENST00000587988 VAMP3Q15836 100 aa6.36□□□□□ -1.39
SMARCA4-213ENST00000587988 LINC00575Q6W349 94 aa6.36□□□□□ -1.39
SMARCA4-213ENST00000587988 TRIAP1O43715 76 aa6.35□□□□□ -1.39
SMARCA4-213ENST00000587988 KRTAP10-8P60410 259 aa6.35□□□□□ -1.39
SMARCA4-213ENST00000587988 BATFQ16520 125 aa6.35□□□□□ -1.39
SMARCA4-213ENST00000587988 GAGE2AQ6NT46 116 aa6.35□□□□□ -1.39
SMARCA4-213ENST00000587988 ZNF706Q9Y5V0 76 aaPredicted RBP6.35□□□□□ -1.39
SMARCA4-213ENST00000587988 FAM218AQ96MZ4 157 aa6.34□□□□□ -1.39
SMARCA4-213ENST00000587988 TNXBP22105 4242 aa6.34□□□□□ -1.39
SMARCA4-213ENST00000587988 J3QL48 77 aa6.33□□□□□ -1.4
SMARCA4-213ENST00000587988 KRTAP13-2Q52LG2 175 aa6.33□□□□□ -1.4
SMARCA4-213ENST00000587988 LINC00483Q53H64 154 aa6.33□□□□□ -1.4
SMARCA4-213ENST00000587988 PCLOQ9Y6V0 5065 aa6.32□□□□□ -1.4
SMARCA4-213ENST00000587988 hADV29S1A0JD25 119 aa6.32□□□□□ -1.4
SMARCA4-213ENST00000587988 H0YGX0 51 aa6.32□□□□□ -1.4
SMARCA4-213ENST00000587988 SLC25A20O43772 301 aa6.32□□□□□ -1.4
SMARCA4-213ENST00000587988 CRYGAP11844 174 aa6.32□□□□□ -1.4
SMARCA4-213ENST00000587988 PSMB2P49721 201 aa6.32□□□□□ -1.4
SMARCA4-213ENST00000587988 FAM229BQ4G0N7 80 aa6.32□□□□□ -1.4
SMARCA4-213ENST00000587988 LINC01547P58512 204 aaPredicted RBP6.31□□□□□ -1.4
SMARCA4-213ENST00000587988 C3orf22Q8N5N4 141 aa6.31□□□□□ -1.4
SMARCA4-213ENST00000587988 DEFB105AQ8NG35 78 aa6.31□□□□□ -1.4
SMARCA4-213ENST00000587988 PCP4L1A6NKN8 68 aa6.3□□□□□ -1.4
SMARCA4-213ENST00000587988 SPRR1BP22528 89 aa6.3□□□□□ -1.4
SMARCA4-213ENST00000587988 CLEC2BQ92478 149 aa6.3□□□□□ -1.4
SMARCA4-213ENST00000587988 NAA38Q9BRA0 125 aaKnown RBP6.3□□□□□ -1.4
SMARCA4-213ENST00000587988 SNHG12Q9BXW3 62 aa6.3□□□□□ -1.4
SMARCA4-213ENST00000587988 Q6ZQY7 126 aa6.29□□□□□ -1.4
SMARCA4-213ENST00000587988 Q8N377 158 aa6.29□□□□□ -1.4
SMARCA4-213ENST00000587988 TYMSOSQ8TAI1 123 aa6.29□□□□□ -1.4
SMARCA4-213ENST00000587988 IGLV5-48A0A075B6I7 105 aa6.28□□□□□ -1.4
SMARCA4-213ENST00000587988 TEX49A0A1B0GTD5 131 aa6.28□□□□□ -1.4
SMARCA4-213ENST00000587988 COX6CP09669 75 aa6.28□□□□□ -1.4
SMARCA4-213ENST00000587988 IGLV9-49A0A0B4J1Y8 123 aa6.27□□□□□ -1.41
SMARCA4-213ENST00000587988 SCGB1C2P0DMR2 95 aa6.27□□□□□ -1.41
SMARCA4-213ENST00000587988 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.27□□□□□ -1.41
SMARCA4-213ENST00000587988 SMIM29Q86T20 159 aa6.27□□□□□ -1.41
SMARCA4-213ENST00000587988 A0A1B0GX51 115 aa6.26□□□□□ -1.41
SMARCA4-213ENST00000587988 TAX1BP3O14907 124 aa6.26□□□□□ -1.41
SMARCA4-213ENST00000587988 MOBPQ13875 183 aa6.25□□□□□ -1.41
SMARCA4-213ENST00000587988 C9orf118A6NHY6 69 aa6.24□□□□□ -1.41
SMARCA4-213ENST00000587988 H3BUT2 72 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms