RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
SMARCA4-208ENST00000585799 PRLHP81277 87 aa8.17□□□□□ -1.1
SMARCA4-208ENST00000585799 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
SMARCA4-208ENST00000585799 MRPL55Q7Z7F7 128 aaKnown RBP8.17□□□□□ -1.1
SMARCA4-208ENST00000585799 SS18L2Q9UHA2 77 aa8.17□□□□□ -1.1
SMARCA4-208ENST00000585799 B9D2Q9BPU9 175 aa8.17□□□□□ -1.1
SMARCA4-208ENST00000585799 NUPR2A6NF83 97 aa8.16□□□□□ -1.1
SMARCA4-208ENST00000585799 CCDC179H3BU77 68 aa8.16□□□□□ -1.1
SMARCA4-208ENST00000585799 UPK3BQ9BT76 320 aa8.15□□□□□ -1.1
SMARCA4-208ENST00000585799 ELOF1P60002 83 aaKnown RBP8.13□□□□□ -1.11
SMARCA4-208ENST00000585799 ST20-AS1Q8NBB2 130 aa8.13□□□□□ -1.11
SMARCA4-208ENST00000585799 KRTAP26-1Q6PEX3 210 aa8.12□□□□□ -1.11
SMARCA4-208ENST00000585799 REG3GQ6UW15 175 aa8.12□□□□□ -1.11
SMARCA4-208ENST00000585799 PDE6GP18545 87 aa8.11□□□□□ -1.11
SMARCA4-208ENST00000585799 DHRS4-AS1Q9P1J3 65 aa8.11□□□□□ -1.11
SMARCA4-208ENST00000585799 TENM2Q9NT68 2774 aa8.1□□□□□ -1.11
SMARCA4-208ENST00000585799 H3BQ85 93 aa8.1□□□□□ -1.11
SMARCA4-208ENST00000585799 PHF5AQ7RTV0 110 aaKnown RBP8.1□□□□□ -1.11
SMARCA4-208ENST00000585799 NBDYA0A0U1RRE5 68 aa8.1□□□□□ -1.11
SMARCA4-208ENST00000585799 ATOX1O00244 68 aa8.09□□□□□ -1.11
SMARCA4-208ENST00000585799 KRTAP1-5Q9BYS1 174 aa8.09□□□□□ -1.11
SMARCA4-208ENST00000585799 Q6JHZ5 121 aa8.09□□□□□ -1.11
SMARCA4-208ENST00000585799 F8WDY8 70 aa8.08□□□□□ -1.12
SMARCA4-208ENST00000585799 NHLRC4P0CG21 123 aaPredicted RBP8.08□□□□□ -1.12
SMARCA4-208ENST00000585799 APLNQ9ULZ1 77 aa8.08□□□□□ -1.12
SMARCA4-208ENST00000585799 BPY2O14599 106 aa8.08□□□□□ -1.12
SMARCA4-208ENST00000585799 Q6Q795 121 aa8.08□□□□□ -1.12
SMARCA4-208ENST00000585799 Q8N9L7 120 aa8.08□□□□□ -1.12
SMARCA4-208ENST00000585799 Q6ZVQ6 151 aa8.07□□□□□ -1.12
SMARCA4-208ENST00000585799 C1orf137Q5JT78 98 aa8.07□□□□□ -1.12
SMARCA4-208ENST00000585799 LINC00528Q8N1L1 170 aa8.07□□□□□ -1.12
SMARCA4-208ENST00000585799 IMUPQ9GZP8 106 aa8.07□□□□□ -1.12
SMARCA4-208ENST00000585799 PRYO14603 147 aa8.06□□□□□ -1.12
SMARCA4-208ENST00000585799 Q6ZQT0 140 aa8.06□□□□□ -1.12
SMARCA4-208ENST00000585799 A0A0G2JQZ4 141 aa8.05□□□□□ -1.12
SMARCA4-208ENST00000585799 TRBV7-7A0A0K0K1E9 115 aa8.05□□□□□ -1.12
SMARCA4-208ENST00000585799 A0A1W2PNN7 141 aa8.05□□□□□ -1.12
SMARCA4-208ENST00000585799 DEFB116Q30KQ4 102 aa8.05□□□□□ -1.12
SMARCA4-208ENST00000585799 Q6ZRX8 168 aa8.04□□□□□ -1.12
SMARCA4-208ENST00000585799 C20orf197Q8N268 126 aa8.03□□□□□ -1.12
SMARCA4-208ENST00000585799 IGLV1-50A0A075B6I6 118 aa8.03□□□□□ -1.12
SMARCA4-208ENST00000585799 HRCT1Q6UXD1 115 aa8.03□□□□□ -1.12
SMARCA4-208ENST00000585799 KCNQ1DNQ9H478 68 aa8.03□□□□□ -1.12
SMARCA4-208ENST00000585799 ERC2-IT1O76042 136 aa8.02□□□□□ -1.13
SMARCA4-208ENST00000585799 IGLV9-49A0A0B4J1Y8 123 aa8.02□□□□□ -1.13
SMARCA4-208ENST00000585799 LRCOL1A6NCL2 159 aa8.02□□□□□ -1.13
SMARCA4-208ENST00000585799 C16orf90A8MZG2 172 aa8.02□□□□□ -1.13
SMARCA4-208ENST00000585799 LINC01547P58512 204 aaPredicted RBP8.02□□□□□ -1.13
SMARCA4-208ENST00000585799 LINC01600Q96MT4 127 aa8.01□□□□□ -1.13
SMARCA4-208ENST00000585799 ATP5EP2Q5VTU8 51 aa8□□□□□ -1.13
SMARCA4-208ENST00000585799 TRBV7-6A0A0J9YX20 115 aa8□□□□□ -1.13
SMARCA4-208ENST00000585799 C1orf134Q5TEV5 83 aa7.99□□□□□ -1.13
SMARCA4-208ENST00000585799 PKIGQ9Y2B9 76 aa7.99□□□□□ -1.13
SMARCA4-208ENST00000585799 IGLV5-52A0A0A0MRZ9 124 aa7.99□□□□□ -1.13
SMARCA4-208ENST00000585799 Q8N377 158 aa7.99□□□□□ -1.13
SMARCA4-208ENST00000585799 UQCRQO14949 82 aa7.99□□□□□ -1.13
SMARCA4-208ENST00000585799 Q9BRP9 147 aa7.98□□□□□ -1.13
SMARCA4-208ENST00000585799 TLX1NBP0CAT3 122 aa7.98□□□□□ -1.13
SMARCA4-208ENST00000585799 SMIM20Q8N5G0 67 aa7.98□□□□□ -1.13
SMARCA4-208ENST00000585799 A0A087WSZ3 146 aa7.97□□□□□ -1.13
SMARCA4-208ENST00000585799 SNURFQ9Y675 71 aa7.97□□□□□ -1.13
SMARCA4-208ENST00000585799 COX7CP15954 63 aa7.96□□□□□ -1.13
SMARCA4-208ENST00000585799 EPM2AB3EWF7 344 aa7.96□□□□□ -1.14
SMARCA4-208ENST00000585799 SERP2Q8N6R1 65 aa7.96□□□□□ -1.14
SMARCA4-208ENST00000585799 LINC00474Q9P2X8 69 aa7.96□□□□□ -1.14
SMARCA4-208ENST00000585799 LOC110117498A0A087WWA1 95 aa7.95□□□□□ -1.14
SMARCA4-208ENST00000585799 OBSCN-AS1Q96MR7 158 aa7.95□□□□□ -1.14
SMARCA4-208ENST00000585799 H0Y9J4 135 aa7.94□□□□□ -1.14
SMARCA4-208ENST00000585799 WFDC13Q8IUB5 93 aa7.94□□□□□ -1.14
SMARCA4-208ENST00000585799 RTL8CO15255 209 aa7.94□□□□□ -1.14
SMARCA4-208ENST00000585799 C9orf163Q8N9P6 203 aa7.94□□□□□ -1.14
SMARCA4-208ENST00000585799 CDK2AP2O75956 126 aa7.93□□□□□ -1.14
SMARCA4-208ENST00000585799 LINC00476Q8WZB0 136 aa7.93□□□□□ -1.14
SMARCA4-208ENST00000585799 TGP01266 2768 aa7.92□□□□□ -1.14
SMARCA4-208ENST00000585799 TRBV7-4A0A0J9YYF1 115 aa7.91□□□□□ -1.14
SMARCA4-208ENST00000585799 A0A087WTM6 91 aa7.91□□□□□ -1.14
SMARCA4-208ENST00000585799 CNBPP62633 177 aaKnown RBP7.9□□□□□ -1.15
SMARCA4-208ENST00000585799 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.15
SMARCA4-208ENST00000585799 SPINK6Q6UWN8 80 aa7.89□□□□□ -1.15
SMARCA4-208ENST00000585799 FAM30AQ9NZY2 134 aa7.89□□□□□ -1.15
SMARCA4-208ENST00000585799 NDUFS5O43920 106 aa7.88□□□□□ -1.15
SMARCA4-208ENST00000585799 Q8NBF4 154 aa7.88□□□□□ -1.15
SMARCA4-208ENST00000585799 ANAPC11Q9NYG5 84 aa7.87□□□□□ -1.15
SMARCA4-208ENST00000585799 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.87□□□□□ -1.15
SMARCA4-208ENST00000585799 A0A1W2PNM2 257 aa7.86□□□□□ -1.15
SMARCA4-208ENST00000585799 KRTAP7-1Q8IUC3 87 aa7.85□□□□□ -1.15
SMARCA4-208ENST00000585799 IGLV5-37A0A075B6J1 123 aa7.85□□□□□ -1.15
SMARCA4-208ENST00000585799 PANO1I0J062 215 aa7.85□□□□□ -1.15
SMARCA4-208ENST00000585799 CXCL6P80162 114 aa7.84□□□□□ -1.15
SMARCA4-208ENST00000585799 NDUFB1O75438 58 aa7.84□□□□□ -1.15
SMARCA4-208ENST00000585799 RPL37AP61513 92 aaKnown RBP7.84□□□□□ -1.15
SMARCA4-208ENST00000585799 IGFL1Q6UW32 110 aa7.83□□□□□ -1.16
SMARCA4-208ENST00000585799 BCE1O60756 84 aa7.83□□□□□ -1.16
SMARCA4-208ENST00000585799 CIRBP-AS1Q8TBR5 109 aa7.82□□□□□ -1.16
SMARCA4-208ENST00000585799 WWC2-AS2Q96NR7 200 aa7.82□□□□□ -1.16
SMARCA4-208ENST00000585799 TRAV7A0A075B6U4 112 aa7.82□□□□□ -1.16
SMARCA4-208ENST00000585799 TNP2Q05952 138 aa7.82□□□□□ -1.16
SMARCA4-208ENST00000585799 MOBPQ13875 183 aa7.81□□□□□ -1.16
SMARCA4-208ENST00000585799 PRR4Q16378 134 aa7.81□□□□□ -1.16
SMARCA4-208ENST00000585799 SMIM29Q86T20 159 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms