RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 LINC00337Q8N6G1 96 aa6.22□□□□□ -1.41
SMCHD1-212ENST00000585229 PLAC8Q9NZF1 115 aa6.22□□□□□ -1.41
SMCHD1-212ENST00000585229 APOBP04114 4563 aaKnown RBP6.21□□□□□ -1.41
SMCHD1-212ENST00000585229 NCR3O14931 201 aa6.21□□□□□ -1.42
SMCHD1-212ENST00000585229 IGLV6-57P01721 117 aa6.21□□□□□ -1.42
SMCHD1-212ENST00000585229 PRR3P79522 188 aaKnown RBP6.21□□□□□ -1.42
SMCHD1-212ENST00000585229 FAM19A5Q7Z5A7 132 aaPredicted RBP6.21□□□□□ -1.42
SMCHD1-212ENST00000585229 NKAPP1Q8N9T2 125 aa6.21□□□□□ -1.42
SMCHD1-212ENST00000585229 PRO1854Q9UHT4 67 aa6.21□□□□□ -1.42
SMCHD1-212ENST00000585229 C22orf24Q9Y442 160 aa6.21□□□□□ -1.42
SMCHD1-212ENST00000585229 A0A087WYN8 130 aa6.2□□□□□ -1.42
SMCHD1-212ENST00000585229 K7ERJ3 54 aa6.2□□□□□ -1.42
SMCHD1-212ENST00000585229 M0QXV9 152 aa6.2□□□□□ -1.42
SMCHD1-212ENST00000585229 BATFQ16520 125 aa6.2□□□□□ -1.42
SMCHD1-212ENST00000585229 C7orf33Q8WU49 177 aa6.2□□□□□ -1.42
SMCHD1-212ENST00000585229 RAB37Q96AX2 223 aa6.2□□□□□ -1.42
SMCHD1-212ENST00000585229 RPL13AP40429 203 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-212ENST00000585229 MRPL55Q7Z7F7 128 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-212ENST00000585229 TMEM126AQ9H061 195 aa6.19□□□□□ -1.42
SMCHD1-212ENST00000585229 LBHQ53QV2 105 aaPredicted RBP6.18□□□□□ -1.42
SMCHD1-212ENST00000585229 COL5A1-AS1Q5SY13 56 aa6.18□□□□□ -1.42
SMCHD1-212ENST00000585229 LINC00167Q96N53 147 aa6.18□□□□□ -1.42
SMCHD1-212ENST00000585229 IGLV1-50A0A075B6I6 118 aa6.17□□□□□ -1.42
SMCHD1-212ENST00000585229 TRBV10-3A0A0K0K1G6 114 aa6.17□□□□□ -1.42
SMCHD1-212ENST00000585229 TAX1BP3O14907 124 aa6.17□□□□□ -1.42
SMCHD1-212ENST00000585229 S100A7L2Q5SY68 101 aa6.17□□□□□ -1.42
SMCHD1-212ENST00000585229 KCNQ1DNQ9H478 68 aa6.17□□□□□ -1.42
SMCHD1-212ENST00000585229 CBY1Q9Y3M2 126 aa6.17□□□□□ -1.42
SMCHD1-212ENST00000585229 PRYO14603 147 aa6.16□□□□□ -1.42
SMCHD1-212ENST00000585229 TSPAN13O95857 204 aa6.16□□□□□ -1.42
SMCHD1-212ENST00000585229 RPL28P46779 137 aaKnown RBP6.16□□□□□ -1.42
SMCHD1-212ENST00000585229 SCXQ7RTU7 201 aa6.16□□□□□ -1.42
SMCHD1-212ENST00000585229 PHF5AQ7RTV0 110 aaKnown RBP6.16□□□□□ -1.42
SMCHD1-212ENST00000585229 OR13C6PQ8NH95 151 aa6.16□□□□□ -1.42
SMCHD1-212ENST00000585229 CIRBP-AS1Q8TBR5 109 aa6.16□□□□□ -1.42
SMCHD1-212ENST00000585229 TRAV23DV6A0A075B6W5 121 aa6.15□□□□□ -1.42
SMCHD1-212ENST00000585229 SPRR1AP35321 89 aa6.15□□□□□ -1.42
SMCHD1-212ENST00000585229 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.42
SMCHD1-212ENST00000585229 EPPK1P58107 5090 aaKnown RBP6.14□□□□□ -1.43
SMCHD1-212ENST00000585229 GAGE10A6NGK3 116 aa6.14□□□□□ -1.43
SMCHD1-212ENST00000585229 KRTAP4-16G5E9R7 235 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-212ENST00000585229 DPH3Q96FX2 82 aa6.14□□□□□ -1.43
SMCHD1-212ENST00000585229 RYR1P21817 5038 aa6.14□□□□□ -1.43
SMCHD1-212ENST00000585229 TRBV7-6A0A0J9YX20 115 aa6.13□□□□□ -1.43
SMCHD1-212ENST00000585229 RPL37AP8A6NKH3 93 aa6.13□□□□□ -1.43
SMCHD1-212ENST00000585229 XGP55808 180 aa6.13□□□□□ -1.43
SMCHD1-212ENST00000585229 KRTAP11-1Q8IUC1 163 aa6.13□□□□□ -1.43
SMCHD1-212ENST00000585229 H7C2G1 150 aa6.12□□□□□ -1.43
SMCHD1-212ENST00000585229 ZNF73O43830 326 aaPredicted RBP6.12□□□□□ -1.43
SMCHD1-212ENST00000585229 Q1RN00 199 aa6.12□□□□□ -1.43
SMCHD1-212ENST00000585229 DIRC1Q969H9 104 aa6.12□□□□□ -1.43
SMCHD1-212ENST00000585229 UBE2BP63146 152 aa6.11□□□□□ -1.43
SMCHD1-212ENST00000585229 C6orf99Q4VX62 202 aa6.11□□□□□ -1.43
SMCHD1-212ENST00000585229 REG3GQ6UW15 175 aa6.11□□□□□ -1.43
SMCHD1-212ENST00000585229 H3BUT2 72 aa6.1□□□□□ -1.43
SMCHD1-212ENST00000585229 ELOF1P60002 83 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-212ENST00000585229 A0A1W2PPM0 123 aa6.09□□□□□ -1.43
SMCHD1-212ENST00000585229 CDK2AP2O75956 126 aa6.09□□□□□ -1.43
SMCHD1-212ENST00000585229 NAA38Q9BRA0 125 aaKnown RBP6.09□□□□□ -1.43
SMCHD1-212ENST00000585229 H0Y9J4 135 aa6.08□□□□□ -1.44
SMCHD1-212ENST00000585229 H0YGX0 51 aa6.08□□□□□ -1.44
SMCHD1-212ENST00000585229 BCE1O60756 84 aa6.08□□□□□ -1.44
SMCHD1-212ENST00000585229 COX6CP09669 75 aa6.08□□□□□ -1.44
SMCHD1-212ENST00000585229 COX7BP24311 80 aa6.08□□□□□ -1.44
SMCHD1-212ENST00000585229 PSMB2P49721 201 aa6.08□□□□□ -1.44
SMCHD1-212ENST00000585229 HAMPP81172 84 aa6.08□□□□□ -1.44
SMCHD1-212ENST00000585229 LYRM7Q5U5X0 104 aa6.08□□□□□ -1.44
SMCHD1-212ENST00000585229 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
SMCHD1-212ENST00000585229 PSORS1C2Q9UIG4 136 aa6.08□□□□□ -1.44
SMCHD1-212ENST00000585229 ETDCA0A1B0GVM5 59 aa6.07□□□□□ -1.44
SMCHD1-212ENST00000585229 VAMP3Q15836 100 aa6.07□□□□□ -1.44
SMCHD1-212ENST00000585229 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
SMCHD1-212ENST00000585229 Q6ZRX8 168 aa6.07□□□□□ -1.44
SMCHD1-212ENST00000585229 FAT1Q14517 4588 aa6.07□□□□□ -1.44
SMCHD1-212ENST00000585229 BIRC6Q9NR09 4857 aa6.07□□□□□ -1.44
SMCHD1-212ENST00000585229 A0A1B0GX51 115 aa6.06□□□□□ -1.44
SMCHD1-212ENST00000585229 LINC00575Q6W349 94 aa6.06□□□□□ -1.44
SMCHD1-212ENST00000585229 HSPG2P98160 4391 aa6.06□□□□□ -1.44
SMCHD1-212ENST00000585229 LST1O00453 97 aa6.05□□□□□ -1.44
SMCHD1-212ENST00000585229 INAFM2P0DMQ5 153 aa6.05□□□□□ -1.44
SMCHD1-212ENST00000585229 FABP2P12104 132 aa6.05□□□□□ -1.44
SMCHD1-212ENST00000585229 FAM218AQ96MZ4 157 aa6.05□□□□□ -1.44
SMCHD1-212ENST00000585229 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
SMCHD1-212ENST00000585229 KIAA1109Q2LD37 5005 aa6.05□□□□□ -1.44
SMCHD1-212ENST00000585229 TRBV20-1A0A075B6N2 111 aa6.04□□□□□ -1.44
SMCHD1-212ENST00000585229 TCL1BO95988 128 aa6.04□□□□□ -1.44
SMCHD1-212ENST00000585229 SCGB1C2P0DMR2 95 aa6.04□□□□□ -1.44
SMCHD1-212ENST00000585229 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
SMCHD1-212ENST00000585229 FAM19A1Q7Z5A9 133 aa6.04□□□□□ -1.44
SMCHD1-212ENST00000585229 SMCR5Q8TEV8 140 aa6.04□□□□□ -1.44
SMCHD1-212ENST00000585229 CLEC2BQ92478 149 aa6.04□□□□□ -1.44
SMCHD1-212ENST00000585229 Q9BRP9 147 aa6.04□□□□□ -1.44
SMCHD1-212ENST00000585229 TRACP01848 142 aa6.03□□□□□ -1.44
SMCHD1-212ENST00000585229 DHRS4-AS1Q9P1J3 65 aa6.03□□□□□ -1.44
SMCHD1-212ENST00000585229 SPCS1Q9Y6A9 102 aa6.03□□□□□ -1.44
SMCHD1-212ENST00000585229 K7EP34 96 aa6.02□□□□□ -1.45
SMCHD1-212ENST00000585229 IGLV7-43P04211 117 aa6.02□□□□□ -1.45
SMCHD1-212ENST00000585229 KRTAP10-4P60372 401 aaPredicted RBP6.02□□□□□ -1.45
SMCHD1-212ENST00000585229 PRLHP81277 87 aa6.02□□□□□ -1.45
SMCHD1-212ENST00000585229 ATXN8Q156A1 80 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms