RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 B9D2Q9BPU9 175 aa6.71□□□□□ -1.33
RFFL-212ENST00000584655 UQCRQO14949 82 aa6.71□□□□□ -1.34
RFFL-212ENST00000584655 GHRHP01286 108 aa6.71□□□□□ -1.34
RFFL-212ENST00000584655 COX7BP24311 80 aa6.71□□□□□ -1.34
RFFL-212ENST00000584655 HRCT1Q6UXD1 115 aa6.7□□□□□ -1.34
RFFL-212ENST00000584655 UBL5Q9BZL1 73 aa6.7□□□□□ -1.34
RFFL-212ENST00000584655 Q6Q795 121 aa6.7□□□□□ -1.34
RFFL-212ENST00000584655 Q8N814 137 aa6.7□□□□□ -1.34
RFFL-212ENST00000584655 FAM19A3Q7Z5A8 133 aa6.69□□□□□ -1.34
RFFL-212ENST00000584655 DNAH7Q8WXX0 4024 aa6.69□□□□□ -1.34
RFFL-212ENST00000584655 ATOX1O00244 68 aa6.69□□□□□ -1.34
RFFL-212ENST00000584655 C22orf24Q9Y442 160 aa6.69□□□□□ -1.34
RFFL-212ENST00000584655 Q8N9L7 120 aa6.69□□□□□ -1.34
RFFL-212ENST00000584655 LINC00167Q96N53 147 aa6.69□□□□□ -1.34
RFFL-212ENST00000584655 ANAPC11Q9NYG5 84 aa6.69□□□□□ -1.34
RFFL-212ENST00000584655 SNURFQ9Y675 71 aa6.69□□□□□ -1.34
RFFL-212ENST00000584655 FLG2Q5D862 2391 aaPredicted RBP6.69□□□□□ -1.34
RFFL-212ENST00000584655 FAM240AA0A1B0GVK7 77 aa6.68□□□□□ -1.34
RFFL-212ENST00000584655 COX7CP15954 63 aa6.67□□□□□ -1.34
RFFL-212ENST00000584655 RMI2Q96E14 147 aa6.67□□□□□ -1.34
RFFL-212ENST00000584655 KRTAP26-1Q6PEX3 210 aa6.67□□□□□ -1.34
RFFL-212ENST00000584655 PANO1I0J062 215 aa6.67□□□□□ -1.34
RFFL-212ENST00000584655 VPREB1P12018 145 aa6.67□□□□□ -1.34
RFFL-212ENST00000584655 APLNQ9ULZ1 77 aa6.67□□□□□ -1.34
RFFL-212ENST00000584655 PLECQ15149 4684 aaKnown RBP6.66□□□□□ -1.34
RFFL-212ENST00000584655 TRBV7-7A0A0K0K1E9 115 aa6.66□□□□□ -1.34
RFFL-212ENST00000584655 ERC2-IT1O76042 136 aa6.66□□□□□ -1.34
RFFL-212ENST00000584655 J3KT08 172 aa6.65□□□□□ -1.34
RFFL-212ENST00000584655 UPK3BQ9BT76 320 aa6.65□□□□□ -1.34
RFFL-212ENST00000584655 COX17Q14061 63 aa6.65□□□□□ -1.35
RFFL-212ENST00000584655 NBDYA0A0U1RRE5 68 aa6.65□□□□□ -1.35
RFFL-212ENST00000584655 CYSTM1Q9H1C7 97 aa6.65□□□□□ -1.35
RFFL-212ENST00000584655 M0R378 163 aa6.64□□□□□ -1.35
RFFL-212ENST00000584655 RBM3P98179 157 aaKnown RBP6.64□□□□□ -1.35
RFFL-212ENST00000584655 LINC00575Q6W349 94 aa6.64□□□□□ -1.35
RFFL-212ENST00000584655 SVIPQ8NHG7 77 aa6.64□□□□□ -1.35
RFFL-212ENST00000584655 WWC2-AS2Q96NR7 200 aa6.64□□□□□ -1.35
RFFL-212ENST00000584655 DNAH9Q9NYC9 4486 aa6.64□□□□□ -1.35
RFFL-212ENST00000584655 TMEM256-PLSCR3K7ERE1 68 aa6.63□□□□□ -1.35
RFFL-212ENST00000584655 H3BNG1 76 aa6.63□□□□□ -1.35
RFFL-212ENST00000584655 UBE2AP49459 152 aa6.63□□□□□ -1.35
RFFL-212ENST00000584655 MRPL55Q7Z7F7 128 aaKnown RBP6.62□□□□□ -1.35
RFFL-212ENST00000584655 KMT2AQ03164 3969 aa6.62□□□□□ -1.35
RFFL-212ENST00000584655 IGLV9-49A0A0B4J1Y8 123 aa6.62□□□□□ -1.35
RFFL-212ENST00000584655 CCKP06307 115 aa6.62□□□□□ -1.35
RFFL-212ENST00000584655 IMUPQ9GZP8 106 aa6.62□□□□□ -1.35
RFFL-212ENST00000584655 SERP2Q8N6R1 65 aa6.61□□□□□ -1.35
RFFL-212ENST00000584655 NUPR2A6NF83 97 aa6.61□□□□□ -1.35
RFFL-212ENST00000584655 GVQW2A0A096LPI5 108 aaPredicted RBP6.61□□□□□ -1.35
RFFL-212ENST00000584655 STARD9Q9P2P6 4700 aa6.61□□□□□ -1.35
RFFL-212ENST00000584655 JMJD7-PLA2G4BH0Y9G9 81 aa6.6□□□□□ -1.35
RFFL-212ENST00000584655 MUC7Q8TAX7 377 aa6.6□□□□□ -1.35
RFFL-212ENST00000584655 KRTAP11-1Q8IUC1 163 aa6.59□□□□□ -1.35
RFFL-212ENST00000584655 LINC01561Q8N1V8 128 aa6.59□□□□□ -1.35
RFFL-212ENST00000584655 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.35
RFFL-212ENST00000584655 NDUFC2O95298 119 aa6.59□□□□□ -1.36
RFFL-212ENST00000584655 IGLV6-57P01721 117 aa6.59□□□□□ -1.36
RFFL-212ENST00000584655 TNP2Q05952 138 aa6.59□□□□□ -1.36
RFFL-212ENST00000584655 C4orf26Q17RF5 130 aa6.58□□□□□ -1.36
RFFL-212ENST00000584655 C2orf48Q96LS8 159 aa6.58□□□□□ -1.36
RFFL-212ENST00000584655 DMBT1Q9UGM3 2413 aaPredicted RBP6.58□□□□□ -1.36
RFFL-212ENST00000584655 KRTAP7-1Q8IUC3 87 aa6.57□□□□□ -1.36
RFFL-212ENST00000584655 MPLKIPQ8TAP9 179 aa6.57□□□□□ -1.36
RFFL-212ENST00000584655 IGLV5-52A0A0A0MRZ9 124 aa6.56□□□□□ -1.36
RFFL-212ENST00000584655 Q6JHZ5 121 aa6.56□□□□□ -1.36
RFFL-212ENST00000584655 C1orf134Q5TEV5 83 aa6.55□□□□□ -1.36
RFFL-212ENST00000584655 PRR4Q16378 134 aa6.55□□□□□ -1.36
RFFL-212ENST00000584655 SMR3BP02814 79 aaPredicted RBP6.55□□□□□ -1.36
RFFL-212ENST00000584655 REG3GQ6UW15 175 aa6.55□□□□□ -1.36
RFFL-212ENST00000584655 Q9BRP9 147 aa6.54□□□□□ -1.36
RFFL-212ENST00000584655 A0A0U1RQV1 116 aa6.53□□□□□ -1.36
RFFL-212ENST00000584655 RTL8CO15255 209 aa6.53□□□□□ -1.36
RFFL-212ENST00000584655 C1orf137Q5JT78 98 aa6.53□□□□□ -1.36
RFFL-212ENST00000584655 F8WEM9 126 aa6.53□□□□□ -1.36
RFFL-212ENST00000584655 PKIGQ9Y2B9 76 aa6.53□□□□□ -1.36
RFFL-212ENST00000584655 FAM236DA0A1B0GTK5 79 aa6.52□□□□□ -1.37
RFFL-212ENST00000584655 FAM236CP0DP71 79 aa6.52□□□□□ -1.37
RFFL-212ENST00000584655 ELOF1P60002 83 aaKnown RBP6.52□□□□□ -1.37
RFFL-212ENST00000584655 SPINK6Q6UWN8 80 aa6.52□□□□□ -1.37
RFFL-212ENST00000584655 BPY2O14599 106 aa6.51□□□□□ -1.37
RFFL-212ENST00000584655 A0A087WTM6 91 aa6.51□□□□□ -1.37
RFFL-212ENST00000584655 EPM2AB3EWF7 344 aa6.51□□□□□ -1.37
RFFL-212ENST00000584655 Q6ZVQ6 151 aa6.51□□□□□ -1.37
RFFL-212ENST00000584655 IGLV1-50A0A075B6I6 118 aa6.5□□□□□ -1.37
RFFL-212ENST00000584655 TMEM258P61165 79 aa6.5□□□□□ -1.37
RFFL-212ENST00000584655 NREPQ16612 68 aa6.5□□□□□ -1.37
RFFL-212ENST00000584655 LINC00528Q8N1L1 170 aa6.5□□□□□ -1.37
RFFL-212ENST00000584655 Q8N377 158 aa6.5□□□□□ -1.37
RFFL-212ENST00000584655 CRYGAP11844 174 aa6.5□□□□□ -1.37
RFFL-212ENST00000584655 KRTAP10-2P60368 255 aa6.5□□□□□ -1.37
RFFL-212ENST00000584655 LINC01547P58512 204 aaPredicted RBP6.5□□□□□ -1.37
RFFL-212ENST00000584655 Q6ZRX8 168 aa6.49□□□□□ -1.37
RFFL-212ENST00000584655 RPL37AP61513 92 aaKnown RBP6.49□□□□□ -1.37
RFFL-212ENST00000584655 C5orf47Q569G3 176 aa6.49□□□□□ -1.37
RFFL-212ENST00000584655 A0A087WSZ3 146 aa6.48□□□□□ -1.37
RFFL-212ENST00000584655 BRK1Q8WUW1 75 aa6.48□□□□□ -1.37
RFFL-212ENST00000584655 C16orf90A8MZG2 172 aa6.48□□□□□ -1.37
RFFL-212ENST00000584655 FAM30AQ9NZY2 134 aa6.48□□□□□ -1.37
RFFL-212ENST00000584655 WFDC13Q8IUB5 93 aa6.46□□□□□ -1.37
RFFL-212ENST00000584655 C9orf163Q8N9P6 203 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms