RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 RPL37AP8A6NKH3 93 aa7.25□□□□□ -1.25
CDRT1-207ENST00000583965 RPL28P46779 137 aaKnown RBP7.25□□□□□ -1.25
CDRT1-207ENST00000583965 LINC00528Q8N1L1 170 aa7.25□□□□□ -1.25
CDRT1-207ENST00000583965 TMEM126AQ9H061 195 aa7.25□□□□□ -1.25
CDRT1-207ENST00000583965 TRBV20-1A0A075B6N2 111 aa7.24□□□□□ -1.25
CDRT1-207ENST00000583965 TRBV10-3A0A0K0K1G6 114 aa7.24□□□□□ -1.25
CDRT1-207ENST00000583965 H7C2G1 150 aa7.24□□□□□ -1.25
CDRT1-207ENST00000583965 TRIAP1O43715 76 aa7.24□□□□□ -1.25
CDRT1-207ENST00000583965 IGLV6-57P01721 117 aa7.24□□□□□ -1.25
CDRT1-207ENST00000583965 SMR3BP02814 79 aaPredicted RBP7.24□□□□□ -1.25
CDRT1-207ENST00000583965 OR13C6PQ8NH95 151 aa7.24□□□□□ -1.25
CDRT1-207ENST00000583965 RYR1P21817 5038 aa7.24□□□□□ -1.25
CDRT1-207ENST00000583965 KIAA1109Q2LD37 5005 aa7.24□□□□□ -1.25
CDRT1-207ENST00000583965 FAM229AH3BQW9 127 aa7.23□□□□□ -1.25
CDRT1-207ENST00000583965 PRYO14603 147 aa7.23□□□□□ -1.25
CDRT1-207ENST00000583965 COX6CP09669 75 aa7.23□□□□□ -1.25
CDRT1-207ENST00000583965 PSMB2P49721 201 aa7.23□□□□□ -1.25
CDRT1-207ENST00000583965 KCNQ1DNQ9H478 68 aa7.23□□□□□ -1.25
CDRT1-207ENST00000583965 PSORS1C2Q9UIG4 136 aa7.23□□□□□ -1.25
CDRT1-207ENST00000583965 BIRC6Q9NR09 4857 aa7.23□□□□□ -1.25
CDRT1-207ENST00000583965 VPS13BQ7Z7G8 4022 aa7.22□□□□□ -1.25
CDRT1-207ENST00000583965 RPL37AP61513 92 aaKnown RBP7.22□□□□□ -1.25
CDRT1-207ENST00000583965 KRTAP11-1Q8IUC1 163 aa7.22□□□□□ -1.25
CDRT1-207ENST00000583965 PLA2G1BP04054 148 aaKnown RBP7.21□□□□□ -1.26
CDRT1-207ENST00000583965 SCGB1C2P0DMR2 95 aa7.21□□□□□ -1.26
CDRT1-207ENST00000583965 REG3GQ6UW15 175 aa7.21□□□□□ -1.26
CDRT1-207ENST00000583965 Q8N1X5 172 aa7.21□□□□□ -1.26
CDRT1-207ENST00000583965 SMIM11BQ8TCY0 68 aa7.21□□□□□ -1.26
CDRT1-207ENST00000583965 TRAV23DV6A0A075B6W5 121 aa7.2□□□□□ -1.26
CDRT1-207ENST00000583965 TCL1BO95988 128 aa7.2□□□□□ -1.26
CDRT1-207ENST00000583965 SRRM2Q9UQ35 2752 aaKnown RBP7.2□□□□□ -1.26
CDRT1-207ENST00000583965 BCE1O60756 84 aa7.19□□□□□ -1.26
CDRT1-207ENST00000583965 SPRR1AP35321 89 aa7.19□□□□□ -1.26
CDRT1-207ENST00000583965 C1orf137Q5JT78 98 aa7.19□□□□□ -1.26
CDRT1-207ENST00000583965 H0YGX0 51 aa7.18□□□□□ -1.26
CDRT1-207ENST00000583965 ATXN8Q156A1 80 aa7.18□□□□□ -1.26
CDRT1-207ENST00000583965 Q5VSD8 79 aa7.18□□□□□ -1.26
CDRT1-207ENST00000583965 LST1O00453 97 aa7.17□□□□□ -1.26
CDRT1-207ENST00000583965 ZNF73O43830 326 aaPredicted RBP7.17□□□□□ -1.26
CDRT1-207ENST00000583965 DIRC1Q969H9 104 aa7.17□□□□□ -1.26
CDRT1-207ENST00000583965 ETDCA0A1B0GVM5 59 aa7.16□□□□□ -1.26
CDRT1-207ENST00000583965 KRTAP4-16G5E9R7 235 aaPredicted RBP7.16□□□□□ -1.26
CDRT1-207ENST00000583965 H3BMG7 143 aa7.16□□□□□ -1.26
CDRT1-207ENST00000583965 IGLV7-43P04211 117 aa7.16□□□□□ -1.26
CDRT1-207ENST00000583965 KRTAP10-4P60372 401 aaPredicted RBP7.16□□□□□ -1.26
CDRT1-207ENST00000583965 FAT1Q14517 4588 aa7.16□□□□□ -1.26
CDRT1-207ENST00000583965 TRBV7-6A0A0J9YX20 115 aa7.15□□□□□ -1.26
CDRT1-207ENST00000583965 H0Y9J4 135 aa7.15□□□□□ -1.26
CDRT1-207ENST00000583965 TRACP01848 142 aa7.15□□□□□ -1.26
CDRT1-207ENST00000583965 FAM19A1Q7Z5A9 133 aa7.15□□□□□ -1.26
CDRT1-207ENST00000583965 LINC01600Q96MT4 127 aa7.15□□□□□ -1.26
CDRT1-207ENST00000583965 PRO0461Q9UI25 63 aa7.15□□□□□ -1.26
CDRT1-207ENST00000583965 A0A1B0GX51 115 aa7.14□□□□□ -1.27
CDRT1-207ENST00000583965 F8W1H4 67 aa7.14□□□□□ -1.27
CDRT1-207ENST00000583965 UBE2AP49459 152 aa7.14□□□□□ -1.27
CDRT1-207ENST00000583965 C6orf99Q4VX62 202 aa7.14□□□□□ -1.27
CDRT1-207ENST00000583965 CLEC2BQ92478 149 aa7.14□□□□□ -1.27
CDRT1-207ENST00000583965 B5MCH6 92 aa7.13□□□□□ -1.27
CDRT1-207ENST00000583965 ZNF861PO60384 105 aa7.13□□□□□ -1.27
CDRT1-207ENST00000583965 Q6ZRX8 168 aa7.13□□□□□ -1.27
CDRT1-207ENST00000583965 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
CDRT1-207ENST00000583965 FAM218AQ96MZ4 157 aa7.12□□□□□ -1.27
CDRT1-207ENST00000583965 KRTAP17-1Q9BYP8 105 aa7.12□□□□□ -1.27
CDRT1-207ENST00000583965 COX7BP24311 80 aa7.11□□□□□ -1.27
CDRT1-207ENST00000583965 ELOF1P60002 83 aaKnown RBP7.11□□□□□ -1.27
CDRT1-207ENST00000583965 PRLHP81277 87 aa7.11□□□□□ -1.27
CDRT1-207ENST00000583965 SPINK6Q6UWN8 80 aa7.11□□□□□ -1.27
CDRT1-207ENST00000583965 PKHD1L1Q86WI1 4243 aa7.1□□□□□ -1.27
CDRT1-207ENST00000583965 C9JAW5 83 aa7.1□□□□□ -1.27
CDRT1-207ENST00000583965 H3BT86 120 aa7.09□□□□□ -1.27
CDRT1-207ENST00000583965 SLC25A20O43772 301 aa7.09□□□□□ -1.27
CDRT1-207ENST00000583965 INAFM2P0DMQ5 153 aa7.09□□□□□ -1.27
CDRT1-207ENST00000583965 SMCPP49901 116 aaPredicted RBP7.09□□□□□ -1.27
CDRT1-207ENST00000583965 LINC00575Q6W349 94 aa7.09□□□□□ -1.27
CDRT1-207ENST00000583965 DHRS4-AS1Q9P1J3 65 aa7.09□□□□□ -1.27
CDRT1-207ENST00000583965 HERC2O95714 4834 aa7.08□□□□□ -1.28
CDRT1-207ENST00000583965 HIGD2AQ9BW72 106 aa7.08□□□□□ -1.28
CDRT1-207ENST00000583965 SNCGO76070 127 aa7.07□□□□□ -1.28
CDRT1-207ENST00000583965 ANKRD29Q8N6D5 301 aa7.07□□□□□ -1.28
CDRT1-207ENST00000583965 SMCR5Q8TEV8 140 aa7.07□□□□□ -1.28
CDRT1-207ENST00000583965 Q9BRP9 147 aa7.07□□□□□ -1.28
CDRT1-207ENST00000583965 DNAL4O96015 105 aa7.06□□□□□ -1.28
CDRT1-207ENST00000583965 MTURNQ8N3F0 131 aa7.05□□□□□ -1.28
CDRT1-207ENST00000583965 hADV29S1A0JD25 119 aa7.04□□□□□ -1.28
CDRT1-207ENST00000583965 H3BQ85 93 aa7.04□□□□□ -1.28
CDRT1-207ENST00000583965 KRTAP4-5Q9BYR2 181 aa7.04□□□□□ -1.28
CDRT1-207ENST00000583965 ZNF706Q9Y5V0 76 aaPredicted RBP7.04□□□□□ -1.28
CDRT1-207ENST00000583965 TEN1Q86WV5 123 aa7.03□□□□□ -1.28
CDRT1-207ENST00000583965 ORMDL1Q9P0S3 153 aa7.03□□□□□ -1.28
CDRT1-207ENST00000583965 FLG2Q5D862 2391 aaPredicted RBP7.02□□□□□ -1.29
CDRT1-207ENST00000583965 ERC2-IT1O76042 136 aa7.02□□□□□ -1.29
CDRT1-207ENST00000583965 BAALC-AS2P0C853 105 aa7.02□□□□□ -1.29
CDRT1-207ENST00000583965 ETDBQ3ZM63 59 aa7.02□□□□□ -1.29
CDRT1-207ENST00000583965 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.02□□□□□ -1.29
CDRT1-207ENST00000583965 GHRHP01286 108 aa7.01□□□□□ -1.29
CDRT1-207ENST00000583965 OCIAD2Q56VL3 154 aa7.01□□□□□ -1.29
CDRT1-207ENST00000583965 SPRR4Q96PI1 79 aa7.01□□□□□ -1.29
CDRT1-207ENST00000583965 TMEM256-PLSCR3K7ERE1 68 aa6.99□□□□□ -1.29
CDRT1-207ENST00000583965 PPDPFLQ8WWR9 84 aa6.99□□□□□ -1.29
CDRT1-207ENST00000583965 KRTAP1-4P0C5Y4 121 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms