RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 A0A0U1RRA0 63 aa5.84□□□□□ -1.47
SKA2-208ENST00000583927 PRYO14603 147 aa5.84□□□□□ -1.47
SKA2-208ENST00000583927 SPRR1AP35321 89 aa5.84□□□□□ -1.47
SKA2-208ENST00000583927 PET117Q6UWS5 81 aa5.84□□□□□ -1.47
SKA2-208ENST00000583927 FAM19A1Q7Z5A9 133 aa5.84□□□□□ -1.47
SKA2-208ENST00000583927 BOD1L2Q8IYS8 172 aa5.84□□□□□ -1.47
SKA2-208ENST00000583927 KCNQ1DNQ9H478 68 aa5.84□□□□□ -1.47
SKA2-208ENST00000583927 TRBV10-2A0A0K0K1G8 114 aa5.83□□□□□ -1.48
SKA2-208ENST00000583927 E9PLD3 99 aa5.83□□□□□ -1.48
SKA2-208ENST00000583927 SYS1-DBNDD2H3BUS1 97 aa5.83□□□□□ -1.48
SKA2-208ENST00000583927 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
SKA2-208ENST00000583927 RNF213Q63HN8 5207 aa5.82□□□□□ -1.48
SKA2-208ENST00000583927 KRTAP4-16G5E9R7 235 aaPredicted RBP5.82□□□□□ -1.48
SKA2-208ENST00000583927 NDUFC2O95298 119 aa5.82□□□□□ -1.48
SKA2-208ENST00000583927 LGALS3P17931 250 aaKnown RBP5.82□□□□□ -1.48
SKA2-208ENST00000583927 PRLHP81277 87 aa5.82□□□□□ -1.48
SKA2-208ENST00000583927 BATFQ16520 125 aa5.82□□□□□ -1.48
SKA2-208ENST00000583927 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
SKA2-208ENST00000583927 OCIAD2Q56VL3 154 aa5.82□□□□□ -1.48
SKA2-208ENST00000583927 LINC01545Q5VT33 79 aa5.82□□□□□ -1.48
SKA2-208ENST00000583927 TYMSOSQ8TAI1 123 aa5.82□□□□□ -1.48
SKA2-208ENST00000583927 PMCHL2Q9BQD1 86 aa5.82□□□□□ -1.48
SKA2-208ENST00000583927 K7ERU9 68 aa5.8□□□□□ -1.48
SKA2-208ENST00000583927 C3orf79P0CE67 100 aa5.8□□□□□ -1.48
SKA2-208ENST00000583927 SPANXB1Q9NS25 103 aaPredicted RBP5.8□□□□□ -1.48
SKA2-208ENST00000583927 A0A0J9YXY3 114 aa5.79□□□□□ -1.48
SKA2-208ENST00000583927 TRBV10-3A0A0K0K1G6 114 aa5.79□□□□□ -1.48
SKA2-208ENST00000583927 TAX1BP3O14907 124 aa5.79□□□□□ -1.48
SKA2-208ENST00000583927 NCR3O14931 201 aa5.79□□□□□ -1.48
SKA2-208ENST00000583927 SCGB1A1P11684 91 aa5.79□□□□□ -1.48
SKA2-208ENST00000583927 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
SKA2-208ENST00000583927 ANAPC11Q9NYG5 84 aa5.79□□□□□ -1.48
SKA2-208ENST00000583927 TIMM17BO60830 172 aa5.78□□□□□ -1.48
SKA2-208ENST00000583927 KRTDAPP60985 99 aa5.78□□□□□ -1.48
SKA2-208ENST00000583927 DAND5Q8N907 189 aa5.78□□□□□ -1.48
SKA2-208ENST00000583927 SPRR4Q96PI1 79 aa5.78□□□□□ -1.48
SKA2-208ENST00000583927 VPS25Q9BRG1 176 aa5.78□□□□□ -1.48
SKA2-208ENST00000583927 HIGD2AQ9BW72 106 aa5.78□□□□□ -1.48
SKA2-208ENST00000583927 ZNF706Q9Y5V0 76 aaPredicted RBP5.78□□□□□ -1.48
SKA2-208ENST00000583927 ETDCA0A1B0GVM5 59 aa5.77□□□□□ -1.49
SKA2-208ENST00000583927 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
SKA2-208ENST00000583927 B5MCH6 92 aa5.76□□□□□ -1.49
SKA2-208ENST00000583927 HINT1P49773 126 aaPredicted RBP5.76□□□□□ -1.49
SKA2-208ENST00000583927 ADAMTSL4-AS1Q5T5F5 129 aa5.76□□□□□ -1.49
SKA2-208ENST00000583927 LINC00304Q8N9R0 145 aa5.76□□□□□ -1.49
SKA2-208ENST00000583927 LITAFQ99732 161 aa5.76□□□□□ -1.49
SKA2-208ENST00000583927 VAMP3Q15836 100 aa5.75□□□□□ -1.49
SKA2-208ENST00000583927 LINC00483Q53H64 154 aa5.75□□□□□ -1.49
SKA2-208ENST00000583927 BVES-AS1Q5T3Y7 98 aa5.75□□□□□ -1.49
SKA2-208ENST00000583927 SOSTDC1Q6X4U4 206 aa5.75□□□□□ -1.49
SKA2-208ENST00000583927 SMCR5Q8TEV8 140 aa5.75□□□□□ -1.49
SKA2-208ENST00000583927 TSPAN13O95857 204 aa5.74□□□□□ -1.49
SKA2-208ENST00000583927 PRR4Q16378 134 aa5.74□□□□□ -1.49
SKA2-208ENST00000583927 S100A7L2Q5SY68 101 aa5.74□□□□□ -1.49
SKA2-208ENST00000583927 SPAG11AQ6PDA7 123 aa5.74□□□□□ -1.49
SKA2-208ENST00000583927 Q6ZRX8 168 aa5.74□□□□□ -1.49
SKA2-208ENST00000583927 SPANXCQ9NY87 97 aa5.74□□□□□ -1.49
SKA2-208ENST00000583927 ZNF815PA8K554 130 aa5.73□□□□□ -1.49
SKA2-208ENST00000583927 EIF4EBP3O60516 100 aaPredicted RBP5.73□□□□□ -1.49
SKA2-208ENST00000583927 Q6ZVH6 145 aa5.73□□□□□ -1.49
SKA2-208ENST00000583927 C3orf22Q8N5N4 141 aa5.73□□□□□ -1.49
SKA2-208ENST00000583927 LINC00308Q8TCZ7 52 aa5.73□□□□□ -1.49
SKA2-208ENST00000583927 PPDPFQ9H3Y8 114 aa5.73□□□□□ -1.49
SKA2-208ENST00000583927 TRAV23DV6A0A075B6W5 121 aa5.72□□□□□ -1.49
SKA2-208ENST00000583927 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
SKA2-208ENST00000583927 Q9BRP9 147 aa5.72□□□□□ -1.49
SKA2-208ENST00000583927 ZNF73O43830 326 aaPredicted RBP5.71□□□□□ -1.5
SKA2-208ENST00000583927 SLC25A34Q6PIV7 304 aa5.71□□□□□ -1.5
SKA2-208ENST00000583927 GTF2H5Q6ZYL4 71 aa5.71□□□□□ -1.5
SKA2-208ENST00000583927 SPANXDQ9BXN6 97 aa5.71□□□□□ -1.5
SKA2-208ENST00000583927 COPS9Q8WXC6 57 aa5.7□□□□□ -1.5
SKA2-208ENST00000583927 KRTAP9-2Q9BYQ4 174 aa5.7□□□□□ -1.5
SKA2-208ENST00000583927 MUC2Q02817 5179 aa5.7□□□□□ -1.5
SKA2-208ENST00000583927 K7EP34 96 aa5.69□□□□□ -1.5
SKA2-208ENST00000583927 ERC2-IT1O76042 136 aa5.69□□□□□ -1.5
SKA2-208ENST00000583927 IFITM1P13164 125 aa5.69□□□□□ -1.5
SKA2-208ENST00000583927 NPC2P61916 151 aa5.69□□□□□ -1.5
SKA2-208ENST00000583927 TTTY13Q9BZ97 58 aa5.69□□□□□ -1.5
SKA2-208ENST00000583927 C9orf118A6NHY6 69 aa5.68□□□□□ -1.5
SKA2-208ENST00000583927 SPINK1P00995 79 aa5.68□□□□□ -1.5
SKA2-208ENST00000583927 COX8AP10176 69 aa5.68□□□□□ -1.5
SKA2-208ENST00000583927 RPS29P62273 56 aaKnown RBP5.68□□□□□ -1.5
SKA2-208ENST00000583927 TPRXLQ17RH7 258 aa5.68□□□□□ -1.5
SKA2-208ENST00000583927 SSBP3-AS1Q7Z2R9 100 aa5.68□□□□□ -1.5
SKA2-208ENST00000583927 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
SKA2-208ENST00000583927 GAGE2AQ6NT46 116 aa5.67□□□□□ -1.5
SKA2-208ENST00000583927 SCGB1D4Q6XE38 83 aa5.67□□□□□ -1.5
SKA2-208ENST00000583927 C2orf91Q6ZV80 131 aa5.67□□□□□ -1.5
SKA2-208ENST00000583927 ATOH7Q8N100 152 aa5.67□□□□□ -1.5
SKA2-208ENST00000583927 TRBV7-6A0A0J9YX20 115 aa5.66□□□□□ -1.5
SKA2-208ENST00000583927 A0A1B0GV72 72 aa5.66□□□□□ -1.5
SKA2-208ENST00000583927 A6NDN8 102 aa5.66□□□□□ -1.5
SKA2-208ENST00000583927 FP248Q71RG6 208 aaPredicted RBP5.66□□□□□ -1.5
SKA2-208ENST00000583927 Q8NBF4 154 aa5.66□□□□□ -1.5
SKA2-208ENST00000583927 DHRS4-AS1Q9P1J3 65 aa5.66□□□□□ -1.5
SKA2-208ENST00000583927 A6NJY4 79 aa5.65□□□□□ -1.5
SKA2-208ENST00000583927 SPRR1BP22528 89 aa5.65□□□□□ -1.5
SKA2-208ENST00000583927 OR13C6PQ8NH95 151 aa5.65□□□□□ -1.5
SKA2-208ENST00000583927 RETNLBQ9BQ08 111 aa5.65□□□□□ -1.5
SKA2-208ENST00000583927 MUC17Q685J3 4493 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms