RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 LST1O00453 97 aa6.98□□□□□ -1.29
TOP3A-216ENST00000583804 NCR3O14931 201 aa6.98□□□□□ -1.29
TOP3A-216ENST00000583804 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
TOP3A-216ENST00000583804 C9orf129Q5T035 196 aaKnown RBP6.98□□□□□ -1.29
TOP3A-216ENST00000583804 LINC00474Q9P2X8 69 aa6.98□□□□□ -1.29
TOP3A-216ENST00000583804 HAMPP81172 84 aa6.97□□□□□ -1.29
TOP3A-216ENST00000583804 FAM19A5Q7Z5A7 132 aaPredicted RBP6.97□□□□□ -1.29
TOP3A-216ENST00000583804 SPACA4Q8TDM5 124 aa6.97□□□□□ -1.29
TOP3A-216ENST00000583804 Q6ZSA8 131 aa6.96□□□□□ -1.3
TOP3A-216ENST00000583804 CDIP1Q9H305 208 aa6.96□□□□□ -1.3
TOP3A-216ENST00000583804 DYNC1H1Q14204 4646 aaKnown RBP6.96□□□□□ -1.3
TOP3A-216ENST00000583804 LRP1BQ9NZR2 4599 aa6.95□□□□□ -1.3
TOP3A-216ENST00000583804 A0A087WYN8 130 aa6.95□□□□□ -1.3
TOP3A-216ENST00000583804 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
TOP3A-216ENST00000583804 HERC2O95714 4834 aa6.95□□□□□ -1.3
TOP3A-216ENST00000583804 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
TOP3A-216ENST00000583804 CIRBP-AS1Q8TBR5 109 aa6.94□□□□□ -1.3
TOP3A-216ENST00000583804 TRAV13-2A0A0B4J235 113 aa6.93□□□□□ -1.3
TOP3A-216ENST00000583804 A0A1W2PNN7 141 aa6.93□□□□□ -1.3
TOP3A-216ENST00000583804 XGP55808 180 aa6.93□□□□□ -1.3
TOP3A-216ENST00000583804 IGKV2-28A0A075B6P5 120 aa6.92□□□□□ -1.3
TOP3A-216ENST00000583804 IGKV2D-28P01615 120 aa6.92□□□□□ -1.3
TOP3A-216ENST00000583804 CLEC2BQ92478 149 aa6.92□□□□□ -1.3
TOP3A-216ENST00000583804 DNAH8Q96JB1 4490 aa6.92□□□□□ -1.3
TOP3A-216ENST00000583804 TRACP01848 142 aa6.92□□□□□ -1.3
TOP3A-216ENST00000583804 RPL28P46779 137 aaKnown RBP6.92□□□□□ -1.3
TOP3A-216ENST00000583804 OR13C6PQ8NH95 151 aa6.92□□□□□ -1.3
TOP3A-216ENST00000583804 PLAC8Q9NZF1 115 aa6.92□□□□□ -1.3
TOP3A-216ENST00000583804 CDK2AP2O75956 126 aa6.91□□□□□ -1.3
TOP3A-216ENST00000583804 VPREB1P12018 145 aa6.91□□□□□ -1.3
TOP3A-216ENST00000583804 LINC00337Q8N6G1 96 aa6.91□□□□□ -1.3
TOP3A-216ENST00000583804 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.31
TOP3A-216ENST00000583804 NKAPP1Q8N9T2 125 aa6.9□□□□□ -1.31
TOP3A-216ENST00000583804 SMR3BP02814 79 aaPredicted RBP6.89□□□□□ -1.31
TOP3A-216ENST00000583804 FAM240AA0A1B0GVK7 77 aa6.88□□□□□ -1.31
TOP3A-216ENST00000583804 RPL37AP8A6NKH3 93 aa6.88□□□□□ -1.31
TOP3A-216ENST00000583804 S100A7L2Q5SY68 101 aa6.88□□□□□ -1.31
TOP3A-216ENST00000583804 PHF5AQ7RTV0 110 aaKnown RBP6.88□□□□□ -1.31
TOP3A-216ENST00000583804 PLA2G2DQ9UNK4 145 aa6.88□□□□□ -1.31
TOP3A-216ENST00000583804 C22orf24Q9Y442 160 aa6.88□□□□□ -1.31
TOP3A-216ENST00000583804 C7orf33Q8WU49 177 aa6.87□□□□□ -1.31
TOP3A-216ENST00000583804 TRBV10-3A0A0K0K1G6 114 aa6.86□□□□□ -1.31
TOP3A-216ENST00000583804 TEX49A0A1B0GTD5 131 aa6.86□□□□□ -1.31
TOP3A-216ENST00000583804 NDUFC2O95298 119 aa6.86□□□□□ -1.31
TOP3A-216ENST00000583804 APOBP04114 4563 aaKnown RBP6.86□□□□□ -1.31
TOP3A-216ENST00000583804 PCLOQ9Y6V0 5065 aa6.86□□□□□ -1.31
TOP3A-216ENST00000583804 EPM2AB3EWF7 344 aa6.85□□□□□ -1.31
TOP3A-216ENST00000583804 H0YGX0 51 aa6.85□□□□□ -1.31
TOP3A-216ENST00000583804 MT-ATP8P03928 68 aa6.85□□□□□ -1.31
TOP3A-216ENST00000583804 IGLV5-37A0A075B6J1 123 aa6.85□□□□□ -1.31
TOP3A-216ENST00000583804 M0R378 163 aa6.85□□□□□ -1.31
TOP3A-216ENST00000583804 UBE2BP63146 152 aa6.85□□□□□ -1.31
TOP3A-216ENST00000583804 MRPL55Q7Z7F7 128 aaKnown RBP6.85□□□□□ -1.31
TOP3A-216ENST00000583804 LINC00167Q96N53 147 aa6.85□□□□□ -1.31
TOP3A-216ENST00000583804 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
TOP3A-216ENST00000583804 ACYP1P07311 99 aa6.83□□□□□ -1.32
TOP3A-216ENST00000583804 Q6Q795 121 aa6.83□□□□□ -1.32
TOP3A-216ENST00000583804 KRTAP11-1Q8IUC1 163 aa6.83□□□□□ -1.32
TOP3A-216ENST00000583804 SMIM11BQ8TCY0 68 aa6.83□□□□□ -1.32
TOP3A-216ENST00000583804 FAM218AQ96MZ4 157 aa6.83□□□□□ -1.32
TOP3A-216ENST00000583804 KIAA1109Q2LD37 5005 aa6.83□□□□□ -1.32
TOP3A-216ENST00000583804 TRAV23DV6A0A075B6W5 121 aa6.81□□□□□ -1.32
TOP3A-216ENST00000583804 A0A1B0GV72 72 aa6.81□□□□□ -1.32
TOP3A-216ENST00000583804 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
TOP3A-216ENST00000583804 IGLV6-57P01721 117 aa6.81□□□□□ -1.32
TOP3A-216ENST00000583804 BAALC-AS2P0C853 105 aa6.81□□□□□ -1.32
TOP3A-216ENST00000583804 A0A1B0GX51 115 aa6.8□□□□□ -1.32
TOP3A-216ENST00000583804 RPL37AP61513 92 aaKnown RBP6.8□□□□□ -1.32
TOP3A-216ENST00000583804 TMEM126AQ9H061 195 aa6.8□□□□□ -1.32
TOP3A-216ENST00000583804 SNCGO76070 127 aa6.79□□□□□ -1.32
TOP3A-216ENST00000583804 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
TOP3A-216ENST00000583804 C6orf99Q4VX62 202 aa6.79□□□□□ -1.32
TOP3A-216ENST00000583804 PSORS1C2Q9UIG4 136 aa6.79□□□□□ -1.32
TOP3A-216ENST00000583804 HSPG2P98160 4391 aa6.79□□□□□ -1.32
TOP3A-216ENST00000583804 IGLV1-50A0A075B6I6 118 aa6.79□□□□□ -1.32
TOP3A-216ENST00000583804 DNAL4O96015 105 aa6.79□□□□□ -1.32
TOP3A-216ENST00000583804 LCE2AQ5TA79 106 aaPredicted RBP6.79□□□□□ -1.32
TOP3A-216ENST00000583804 Q8N1X5 172 aa6.79□□□□□ -1.32
TOP3A-216ENST00000583804 PLA2G1BP04054 148 aaKnown RBP6.78□□□□□ -1.32
TOP3A-216ENST00000583804 C1orf137Q5JT78 98 aa6.78□□□□□ -1.32
TOP3A-216ENST00000583804 Q5VSD8 79 aa6.78□□□□□ -1.32
TOP3A-216ENST00000583804 ZNF73O43830 326 aaPredicted RBP6.77□□□□□ -1.33
TOP3A-216ENST00000583804 DIRC1Q969H9 104 aa6.77□□□□□ -1.33
TOP3A-216ENST00000583804 OBSCN-AS1Q96MR7 158 aa6.77□□□□□ -1.33
TOP3A-216ENST00000583804 PRYO14603 147 aa6.76□□□□□ -1.33
TOP3A-216ENST00000583804 RYR1P21817 5038 aa6.76□□□□□ -1.33
TOP3A-216ENST00000583804 REG3GQ6UW15 175 aa6.76□□□□□ -1.33
TOP3A-216ENST00000583804 FAT1Q14517 4588 aa6.75□□□□□ -1.33
TOP3A-216ENST00000583804 TRBV7-7A0A0K0K1E9 115 aa6.75□□□□□ -1.33
TOP3A-216ENST00000583804 PRLHP81277 87 aa6.75□□□□□ -1.33
TOP3A-216ENST00000583804 KCNQ1DNQ9H478 68 aa6.75□□□□□ -1.33
TOP3A-216ENST00000583804 ETDCA0A1B0GVM5 59 aa6.74□□□□□ -1.33
TOP3A-216ENST00000583804 COX7BP24311 80 aa6.74□□□□□ -1.33
TOP3A-216ENST00000583804 FAM19A1Q7Z5A9 133 aa6.74□□□□□ -1.33
TOP3A-216ENST00000583804 BCE1O60756 84 aa6.73□□□□□ -1.33
TOP3A-216ENST00000583804 IMUPQ9GZP8 106 aa6.73□□□□□ -1.33
TOP3A-216ENST00000583804 ORMDL1Q9P0S3 153 aa6.73□□□□□ -1.33
TOP3A-216ENST00000583804 LINC00643Q86TS7 51 aa6.73□□□□□ -1.33
TOP3A-216ENST00000583804 IGLV7-43P04211 117 aa6.72□□□□□ -1.33
TOP3A-216ENST00000583804 UBE2AP49459 152 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms