RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 C1orf134Q5TEV5 83 aa5.89□□□□□ -1.47
SKA2-207ENST00000583380 CR1P17927 2039 aa5.88□□□□□ -1.47
SKA2-207ENST00000583380 PRRC2CQ9Y520 2896 aaKnown RBP5.88□□□□□ -1.47
SKA2-207ENST00000583380 CDK2AP2O75956 126 aa5.88□□□□□ -1.47
SKA2-207ENST00000583380 PCOTHQ58A44 107 aa5.88□□□□□ -1.47
SKA2-207ENST00000583380 CSAG1Q6PB30 78 aa5.88□□□□□ -1.47
SKA2-207ENST00000583380 X6R8D5 127 aa5.88□□□□□ -1.47
SKA2-207ENST00000583380 A0A1W2PPR1 153 aa5.87□□□□□ -1.47
SKA2-207ENST00000583380 DEFB116Q30KQ4 102 aa5.87□□□□□ -1.47
SKA2-207ENST00000583380 PTPRZ1P23471 2315 aaPredicted RBP5.87□□□□□ -1.47
SKA2-207ENST00000583380 FRYLO94915 3013 aa5.86□□□□□ -1.47
SKA2-207ENST00000583380 C15orf56Q8N910 161 aa5.86□□□□□ -1.47
SKA2-207ENST00000583380 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
SKA2-207ENST00000583380 USP34Q70CQ2 3546 aa5.85□□□□□ -1.47
SKA2-207ENST00000583380 C2CD3Q4AC94 2353 aa5.85□□□□□ -1.47
SKA2-207ENST00000583380 KRTAP26-1Q6PEX3 210 aa5.85□□□□□ -1.47
SKA2-207ENST00000583380 MRPL34Q9BQ48 92 aaKnown RBP5.84□□□□□ -1.47
SKA2-207ENST00000583380 C8orf17Q9NRJ1 99 aa5.84□□□□□ -1.47
SKA2-207ENST00000583380 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.83□□□□□ -1.486e-8■■■□□ 16
SKA2-207ENST00000583380 A0A096LPF7 62 aa5.83□□□□□ -1.48
SKA2-207ENST00000583380 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
SKA2-207ENST00000583380 LINC01556Q5JQF7 62 aa5.82□□□□□ -1.48
SKA2-207ENST00000583380 PRO3102Q9H379 93 aa5.82□□□□□ -1.48
SKA2-207ENST00000583380 REV3LO60673 3130 aa5.82□□□□□ -1.48
SKA2-207ENST00000583380 ZDBF2Q9HCK1 2354 aa5.81□□□□□ -1.48
SKA2-207ENST00000583380 LAMA3Q16787 3333 aa5.81□□□□□ -1.48
SKA2-207ENST00000583380 VCANP13611 3396 aa5.81□□□□□ -1.48
SKA2-207ENST00000583380 INAFM1C9JVW0 142 aa5.81□□□□□ -1.48
SKA2-207ENST00000583380 ADM2Q7Z4H4 148 aa5.81□□□□□ -1.48
SKA2-207ENST00000583380 SPTAN1Q13813 2472 aaKnown RBP5.81□□□□□ -1.48
SKA2-207ENST00000583380 A0A1B0GVX0 72 aa5.8□□□□□ -1.48
SKA2-207ENST00000583380 ZNF861PO60384 105 aa5.8□□□□□ -1.48
SKA2-207ENST00000583380 NCOR1O75376 2440 aa5.8□□□□□ -1.48
SKA2-207ENST00000583380 CFAP47Q6ZTR5 3102 aa5.79□□□□□ -1.48
SKA2-207ENST00000583380 PRUNE2Q8WUY3 3088 aa5.78□□□□□ -1.48
SKA2-207ENST00000583380 IGLV7-43P04211 117 aa5.77□□□□□ -1.49
SKA2-207ENST00000583380 TRIOBPQ9H2D6 2365 aa5.77□□□□□ -1.49
SKA2-207ENST00000583380 ABCA2Q9BZC7 2435 aa5.75□□□□□ -1.49
SKA2-207ENST00000583380 K7ERS5 55 aa5.75□□□□□ -1.49
SKA2-207ENST00000583380 ACACAQ13085 2346 aa5.75□□□□□ -1.49
SKA2-207ENST00000583380 FREM2Q5SZK8 3169 aa5.75□□□□□ -1.49
SKA2-207ENST00000583380 TACC2O95359 2948 aa5.74□□□□□ -1.49
SKA2-207ENST00000583380 WDFY4Q6ZS81 3184 aa5.73□□□□□ -1.49
SKA2-207ENST00000583380 FAM168BA1KXE4 195 aa5.72□□□□□ -1.49
SKA2-207ENST00000583380 FAM229AH3BQW9 127 aa5.72□□□□□ -1.49
SKA2-207ENST00000583380 SPTA1P02549 2419 aa5.72□□□□□ -1.49
SKA2-207ENST00000583380 AKAP13Q12802 2813 aa5.71□□□□□ -1.5
SKA2-207ENST00000583380 DNAH10OSP0CZ25 163 aa5.7□□□□□ -1.5
SKA2-207ENST00000583380 CDH23Q9H251 3354 aa5.7□□□□□ -1.5
SKA2-207ENST00000583380 LY6G6CO95867 125 aa5.69□□□□□ -1.5
SKA2-207ENST00000583380 ANAPC11Q9NYG5 84 aa5.69□□□□□ -1.5
SKA2-207ENST00000583380 NOTCH3Q9UM47 2321 aa5.68□□□□□ -1.5
SKA2-207ENST00000583380 WDFY3Q8IZQ1 3526 aa5.68□□□□□ -1.5
SKA2-207ENST00000583380 XP32Q5T750 250 aa5.67□□□□□ -1.5
SKA2-207ENST00000583380 DMXL2Q8TDJ6 3036 aa5.66□□□□□ -1.5
SKA2-207ENST00000583380 A8MUU9 505 aa5.66□□□□□ -1.5
SKA2-207ENST00000583380 HTN3P15516 51 aa5.66□□□□□ -1.5
SKA2-207ENST00000583380 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
SKA2-207ENST00000583380 C14orf177Q52M58 125 aa5.66□□□□□ -1.5
SKA2-207ENST00000583380 SPTBN5Q9NRC6 3674 aaKnown RBP5.66□□□□□ -1.5
SKA2-207ENST00000583380 Q96NJ1 140 aa5.65□□□□□ -1.5
SKA2-207ENST00000583380 MAP1AP78559 2803 aaPredicted RBP5.65□□□□□ -1.51
SKA2-207ENST00000583380 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
SKA2-207ENST00000583380 IGLV5-52A0A0A0MRZ9 124 aa5.64□□□□□ -1.51
SKA2-207ENST00000583380 NUPR2A6NF83 97 aa5.64□□□□□ -1.51
SKA2-207ENST00000583380 KRTAP16-1A8MUX0 517 aa5.64□□□□□ -1.51
SKA2-207ENST00000583380 DEFB135Q30KP9 77 aa5.64□□□□□ -1.51
SKA2-207ENST00000583380 LINC00483Q53H64 154 aa5.64□□□□□ -1.51
SKA2-207ENST00000583380 SPEGQ15772 3267 aa5.63□□□□□ -1.51
SKA2-207ENST00000583380 CSPG4Q6UVK1 2322 aa5.62□□□□□ -1.51
SKA2-207ENST00000583380 SPG11Q96JI7 2443 aa5.62□□□□□ -1.51
SKA2-207ENST00000583380 KMT2BQ9UMN6 2715 aaPredicted RBP5.61□□□□□ -1.51
SKA2-207ENST00000583380 IGKV2-30P06310 120 aa5.6□□□□□ -1.51
SKA2-207ENST00000583380 PRLHP81277 87 aa5.6□□□□□ -1.51
SKA2-207ENST00000583380 KRTAP7-1Q8IUC3 87 aa5.6□□□□□ -1.51
SKA2-207ENST00000583380 OTOGLQ3ZCN5 2332 aa5.6□□□□□ -1.51
SKA2-207ENST00000583380 ADGRG4Q8IZF6 3080 aa5.59□□□□□ -1.51
SKA2-207ENST00000583380 DCHS1Q96JQ0 3298 aa5.59□□□□□ -1.52
SKA2-207ENST00000583380 CHTF8P0CG12 524 aa5.58□□□□□ -1.52
SKA2-207ENST00000583380 TLN1Q9Y490 2541 aaKnown RBP5.56□□□□□ -1.52
SKA2-207ENST00000583380 NBASA2RRP1 2371 aa5.56□□□□□ -1.52
SKA2-207ENST00000583380 CELSR3Q9NYQ7 3312 aa5.56□□□□□ -1.52
SKA2-207ENST00000583380 ANKRD11Q6UB99 2663 aaPredicted RBP5.56□□□□□ -1.52
SKA2-207ENST00000583380 A0A0G2JQZ4 141 aa5.55□□□□□ -1.52
SKA2-207ENST00000583380 A0A1W2PNN7 141 aa5.55□□□□□ -1.52
SKA2-207ENST00000583380 DEFB123Q8N688 67 aa5.55□□□□□ -1.52
SKA2-207ENST00000583380 LINC00304Q8N9R0 145 aa5.55□□□□□ -1.52
SKA2-207ENST00000583380 ATRXP46100 2492 aa5.54□□□□□ -1.52
SKA2-207ENST00000583380 IGKV2D-30A0A075B6S6 120 aa5.54□□□□□ -1.52
SKA2-207ENST00000583380 Q5W150 140 aa5.54□□□□□ -1.52
SKA2-207ENST00000583380 ALMS1Q8TCU4 4167 aa5.53□□□□□ -1.52
SKA2-207ENST00000583380 HRNRQ86YZ3 2850 aaPredicted RBP5.53□□□□□ -1.52
SKA2-207ENST00000583380 DEFB4AO15263 64 aa5.53□□□□□ -1.52
SKA2-207ENST00000583380 DEFB113Q30KQ7 82 aa5.53□□□□□ -1.52
SKA2-207ENST00000583380 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
SKA2-207ENST00000583380 TLN2Q9Y4G6 2542 aa5.53□□□□□ -1.52
SKA2-207ENST00000583380 DMDP11532 3685 aa5.53□□□□□ -1.52
SKA2-207ENST00000583380 NCOR2Q9Y618 2525 aa5.52□□□□□ -1.53
SKA2-207ENST00000583380 PANO1I0J062 215 aa5.52□□□□□ -1.53
SKA2-207ENST00000583380 COX6B2Q6YFQ2 88 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms