RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 LINC00959A0A1B0GUT2 108 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 H3BQ85 93 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 J3KT08 172 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 TMEM256-PLSCR3K7ERE1 68 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 UBE2L6O14933 153 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 DNAL4O96015 105 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 LINC00158P58513 81 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 TMEM258P61165 79 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 COX17Q14061 63 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 MUC7Q8TAX7 377 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 DYNLRB2Q8TF09 96 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 CAMK2N2Q96S95 79 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 LINC00846Q9NV44 126 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 ORMDL1Q9P0S3 153 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 ABCA4P78363 2273 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 TLN1Q9Y490 2541 aaKnown RBP2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 F8P00451 2351 aa2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 PCNX1Q96RV3 2341 aa2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 IGLV4-60A0A075B6I1 120 aa2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 IGHV6-1A0A0B4J1U7 121 aa2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 hADV29S1A0JD25 119 aa2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 SS18Q15532 418 aa2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 C4orf26Q17RF5 130 aa2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 ATP5EP2Q5VTU8 51 aa2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 Q8IZM0 81 aa2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 Q8N814 137 aa2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 CRYBG3Q68DQ2 2970 aa2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 SPTBN1Q01082 2364 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-208ENST00000583344 ZFHX3Q15911 3703 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 HIVEP1P15822 2718 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 WNK2Q9Y3S1 2297 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 TRGV4A0A0C4DH28 118 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 LOC107984640A0A0U1RRK4 108 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 SMIM9A6NGZ8 99 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 LECT2O14960 151 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 DEFB136Q30KP8 78 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 FAM19A5Q7Z5A7 132 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 OR13C6PQ8NH95 151 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 C16orf95Q9H693 158 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 NOP10Q9NPE3 64 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 C14orf132Q9NPU4 83 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 CELSR1Q9NYQ6 3014 aa2.43□□□□□ -2.02
SMCHD1-208ENST00000583344 TRGV2A0A075B6R0 118 aa2.42□□□□□ -2.02
SMCHD1-208ENST00000583344 LOC110117498A0A087WWA1 95 aa2.42□□□□□ -2.02
SMCHD1-208ENST00000583344 IGKV3D-7A0A0C4DH55 119 aa2.42□□□□□ -2.02
SMCHD1-208ENST00000583344 NCR3O14931 201 aa2.42□□□□□ -2.02
SMCHD1-208ENST00000583344 IGLV1-51P01701 117 aa2.42□□□□□ -2.02
SMCHD1-208ENST00000583344 PDE6GP18545 87 aa2.42□□□□□ -2.02
SMCHD1-208ENST00000583344 LINC00575Q6W349 94 aa2.42□□□□□ -2.02
SMCHD1-208ENST00000583344 C3orf56Q8N813 242 aa2.42□□□□□ -2.02
SMCHD1-208ENST00000583344 TOMM7Q9P0U1 55 aa2.42□□□□□ -2.02
SMCHD1-208ENST00000583344 KLK12Q9UKR0 248 aa2.42□□□□□ -2.02
SMCHD1-208ENST00000583344 APCP25054 2843 aa2.42□□□□□ -2.02
SMCHD1-208ENST00000583344 ANKHD1Q8IWZ3 2542 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-208ENST00000583344 ABCA2Q9BZC7 2435 aa2.41□□□□□ -2.02
SMCHD1-208ENST00000583344 MED13LQ71F56 2210 aa2.41□□□□□ -2.02
SMCHD1-208ENST00000583344 IGLV1-50A0A075B6I6 118 aa2.41□□□□□ -2.02
SMCHD1-208ENST00000583344 TRAV7A0A075B6U4 112 aa2.41□□□□□ -2.02
SMCHD1-208ENST00000583344 Q6ZQT0 140 aa2.41□□□□□ -2.02
SMCHD1-208ENST00000583344 SMR3AQ99954 134 aa2.41□□□□□ -2.02
SMCHD1-208ENST00000583344 UBL5Q9BZL1 73 aa2.41□□□□□ -2.02
SMCHD1-208ENST00000583344 CYSTM1Q9H1C7 97 aa2.41□□□□□ -2.02
SMCHD1-208ENST00000583344 NBASA2RRP1 2371 aa2.41□□□□□ -2.02
SMCHD1-208ENST00000583344 A0A087WVE0 104 aa2.4□□□□□ -2.03
SMCHD1-208ENST00000583344 TRBV7-6A0A0J9YX20 115 aa2.4□□□□□ -2.03
SMCHD1-208ENST00000583344 XCL1P47992 114 aa2.4□□□□□ -2.03
SMCHD1-208ENST00000583344 RBM3P98179 157 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-208ENST00000583344 DEFB113Q30KQ7 82 aa2.4□□□□□ -2.03
SMCHD1-208ENST00000583344 PRO0255Q9UI72 69 aa2.4□□□□□ -2.03
SMCHD1-208ENST00000583344 SVEP1Q4LDE5 3571 aa2.4□□□□□ -2.03
SMCHD1-208ENST00000583344 AKAP9Q99996 3911 aa2.39□□□□□ -2.03
SMCHD1-208ENST00000583344 GVQW2A0A096LPI5 108 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-208ENST00000583344 IGLV6-57P01721 117 aa2.39□□□□□ -2.03
SMCHD1-208ENST00000583344 KLKP1Q107X0 134 aa2.39□□□□□ -2.03
SMCHD1-208ENST00000583344 Q5XG85 94 aa2.39□□□□□ -2.03
SMCHD1-208ENST00000583344 RBM12B-AS1Q9P1G2 102 aa2.39□□□□□ -2.03
SMCHD1-208ENST00000583344 NIPBLQ6KC79 2804 aaeCLIP2.38□□□□□ -2.03
SMCHD1-208ENST00000583344 SPG11Q96JI7 2443 aa2.38□□□□□ -2.03
SMCHD1-208ENST00000583344 IGKV3OR2-268A0A0C4DH90 116 aa2.38□□□□□ -2.03
SMCHD1-208ENST00000583344 TRBV7-4A0A0J9YYF1 115 aa2.38□□□□□ -2.03
SMCHD1-208ENST00000583344 H7BZZ5 65 aa2.38□□□□□ -2.03
SMCHD1-208ENST00000583344 NDUFC1O43677 76 aa2.38□□□□□ -2.03
SMCHD1-208ENST00000583344 ERC2-IT1O76042 136 aa2.38□□□□□ -2.03
SMCHD1-208ENST00000583344 ENHOQ6UWT2 76 aa2.38□□□□□ -2.03
SMCHD1-208ENST00000583344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-208ENST00000583344 RP1L1Q8IWN7 2480 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-208ENST00000583344 SERP1Q9Y6X1 66 aa2.38□□□□□ -2.03
SMCHD1-208ENST00000583344 CSMD2Q7Z408 3487 aa2.37□□□□□ -2.03
SMCHD1-208ENST00000583344 TRAV23DV6A0A075B6W5 121 aa2.37□□□□□ -2.03
SMCHD1-208ENST00000583344 A0A0U1RQV1 116 aa2.37□□□□□ -2.03
SMCHD1-208ENST00000583344 A0A1B0GW54 56 aa2.37□□□□□ -2.03
SMCHD1-208ENST00000583344 C8orf87E5RJ46 101 aa2.37□□□□□ -2.03
SMCHD1-208ENST00000583344 LINC00269Q8N2A0 174 aa2.37□□□□□ -2.03
SMCHD1-208ENST00000583344 Q8NDZ9 215 aa2.37□□□□□ -2.03
SMCHD1-208ENST00000583344 DSCR8Q96T75 97 aa2.37□□□□□ -2.03
SMCHD1-208ENST00000583344 MTORP42345 2549 aa2.37□□□□□ -2.03
SMCHD1-208ENST00000583344 VPS13CQ709C8 3753 aa2.37□□□□□ -2.03
SMCHD1-208ENST00000583344 CR1P17927 2039 aa2.37□□□□□ -2.03
SMCHD1-208ENST00000583344 CCDC168Q8NDH2 2452 aa2.36□□□□□ -2.03
SMCHD1-208ENST00000583344 FBN1P35555 2871 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms