RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SPANXCQ9NY87 97 aa7.1□□□□□ -1.27
TOP3A-215ENST00000583328 FSIP2Q5CZC0 6907 aa7.1□□□□□ -1.27
TOP3A-215ENST00000583328 RPL37AP8A6NKH3 93 aa7.09□□□□□ -1.27
TOP3A-215ENST00000583328 UBE2AP49459 152 aa7.09□□□□□ -1.27
TOP3A-215ENST00000583328 NPC2P61916 151 aa7.09□□□□□ -1.27
TOP3A-215ENST00000583328 FAM229BQ4G0N7 80 aa7.09□□□□□ -1.27
TOP3A-215ENST00000583328 SOSTDC1Q6X4U4 206 aa7.09□□□□□ -1.27
TOP3A-215ENST00000583328 Q6ZVH6 145 aa7.09□□□□□ -1.27
TOP3A-215ENST00000583328 LINC00308Q8TCZ7 52 aa7.09□□□□□ -1.27
TOP3A-215ENST00000583328 GAGE10A6NGK3 116 aa7.08□□□□□ -1.28
TOP3A-215ENST00000583328 M0R378 163 aa7.08□□□□□ -1.28
TOP3A-215ENST00000583328 DLEU1O43261 78 aa7.08□□□□□ -1.28
TOP3A-215ENST00000583328 NDUFC2O95298 119 aa7.08□□□□□ -1.28
TOP3A-215ENST00000583328 COPS9Q8WXC6 57 aa7.08□□□□□ -1.28
TOP3A-215ENST00000583328 NCR3O14931 201 aa7.07□□□□□ -1.28
TOP3A-215ENST00000583328 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
TOP3A-215ENST00000583328 IFITM1P13164 125 aa7.07□□□□□ -1.28
TOP3A-215ENST00000583328 CTAG1AP78358 180 aa7.07□□□□□ -1.28
TOP3A-215ENST00000583328 SPANXB1Q9NS25 103 aaPredicted RBP7.07□□□□□ -1.28
TOP3A-215ENST00000583328 TRBV10-2A0A0K0K1G8 114 aa7.06□□□□□ -1.28
TOP3A-215ENST00000583328 LINC00337Q8N6G1 96 aa7.06□□□□□ -1.28
TOP3A-215ENST00000583328 C14orf144Q96I85 54 aa7.06□□□□□ -1.28
TOP3A-215ENST00000583328 IGKV2-28A0A075B6P5 120 aa7.05□□□□□ -1.28
TOP3A-215ENST00000583328 IGKV2D-28P01615 120 aa7.05□□□□□ -1.28
TOP3A-215ENST00000583328 SLC25A34Q6PIV7 304 aa7.05□□□□□ -1.28
TOP3A-215ENST00000583328 S100A12P80511 92 aa7.04□□□□□ -1.28
TOP3A-215ENST00000583328 KRTAP13-1Q8IUC0 172 aa7.04□□□□□ -1.28
TOP3A-215ENST00000583328 MUSTN1Q8IVN3 82 aa7.03□□□□□ -1.28
TOP3A-215ENST00000583328 TRBV10-3A0A0K0K1G6 114 aa7.02□□□□□ -1.29
TOP3A-215ENST00000583328 PRYO14603 147 aa7.02□□□□□ -1.29
TOP3A-215ENST00000583328 SMIM6P0DI80 62 aa7.02□□□□□ -1.29
TOP3A-215ENST00000583328 DDTP30046 118 aa7.02□□□□□ -1.29
TOP3A-215ENST00000583328 ASB16-AS1Q495Z4 193 aa7.02□□□□□ -1.29
TOP3A-215ENST00000583328 LINC00518Q8N0U6 118 aa7.02□□□□□ -1.29
TOP3A-215ENST00000583328 TMEM126AQ9H061 195 aa7.02□□□□□ -1.29
TOP3A-215ENST00000583328 HIGD1BQ9P298 99 aa7.02□□□□□ -1.29
TOP3A-215ENST00000583328 LOC105371267A0A1B0GV96 52 aa7.01□□□□□ -1.29
TOP3A-215ENST00000583328 IGLV6-57P01721 117 aa7.01□□□□□ -1.29
TOP3A-215ENST00000583328 S100A7L2Q5SY68 101 aa7.01□□□□□ -1.29
TOP3A-215ENST00000583328 KCNQ1DNQ9H478 68 aa7.01□□□□□ -1.29
TOP3A-215ENST00000583328 SPAG11AQ6PDA7 123 aa7□□□□□ -1.29
TOP3A-215ENST00000583328 C2orf91Q6ZV80 131 aa7□□□□□ -1.29
TOP3A-215ENST00000583328 FP248Q71RG6 208 aaPredicted RBP7□□□□□ -1.29
TOP3A-215ENST00000583328 C3orf22Q8N5N4 141 aa7□□□□□ -1.29
TOP3A-215ENST00000583328 HIST1H4GQ99525 98 aa7□□□□□ -1.29
TOP3A-215ENST00000583328 PRLHP81277 87 aa6.99□□□□□ -1.29
TOP3A-215ENST00000583328 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
TOP3A-215ENST00000583328 CBY1Q9Y3M2 126 aa6.99□□□□□ -1.29
TOP3A-215ENST00000583328 SPRR1AP35321 89 aa6.98□□□□□ -1.29
TOP3A-215ENST00000583328 SEC61BP60468 96 aaKnown RBP6.98□□□□□ -1.29
TOP3A-215ENST00000583328 C4orf48Q5BLP8 95 aa6.98□□□□□ -1.29
TOP3A-215ENST00000583328 FAM19A1Q7Z5A9 133 aa6.98□□□□□ -1.29
TOP3A-215ENST00000583328 OR13C6PQ8NH95 151 aa6.98□□□□□ -1.29
TOP3A-215ENST00000583328 TRAV23DV6A0A075B6W5 121 aa6.97□□□□□ -1.29
TOP3A-215ENST00000583328 TAL2Q16559 108 aa6.97□□□□□ -1.29
TOP3A-215ENST00000583328 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
TOP3A-215ENST00000583328 UQCR10Q9UDW1 63 aa6.97□□□□□ -1.29
TOP3A-215ENST00000583328 ETDCA0A1B0GVM5 59 aa6.96□□□□□ -1.3
TOP3A-215ENST00000583328 A4D1N5 150 aa6.96□□□□□ -1.3
TOP3A-215ENST00000583328 TRAV13-2A0A0B4J235 113 aa6.95□□□□□ -1.3
TOP3A-215ENST00000583328 KRTAP4-16G5E9R7 235 aaPredicted RBP6.95□□□□□ -1.3
TOP3A-215ENST00000583328 A6NDN8 102 aa6.94□□□□□ -1.3
TOP3A-215ENST00000583328 ZNF73O43830 326 aaPredicted RBP6.94□□□□□ -1.3
TOP3A-215ENST00000583328 CEND1Q8N111 149 aa6.93□□□□□ -1.3
TOP3A-215ENST00000583328 B5MCH6 92 aa6.92□□□□□ -1.3
TOP3A-215ENST00000583328 HSD52Q0P140 79 aa6.92□□□□□ -1.3
TOP3A-215ENST00000583328 Q6ZRX8 168 aa6.92□□□□□ -1.3
TOP3A-215ENST00000583328 PRO1933Q9H354 126 aa6.92□□□□□ -1.3
TOP3A-215ENST00000583328 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
TOP3A-215ENST00000583328 A6NJY4 79 aa6.91□□□□□ -1.3
TOP3A-215ENST00000583328 HINT1P49773 126 aaPredicted RBP6.91□□□□□ -1.3
TOP3A-215ENST00000583328 C12orf57Q99622 126 aa6.91□□□□□ -1.3
TOP3A-215ENST00000583328 HIGD2AQ9BW72 106 aa6.91□□□□□ -1.3
TOP3A-215ENST00000583328 C6orf99Q4VX62 202 aa6.9□□□□□ -1.3
TOP3A-215ENST00000583328 A0A0B4J2C4 111 aa6.89□□□□□ -1.31
TOP3A-215ENST00000583328 FXYD2P54710 66 aa6.89□□□□□ -1.31
TOP3A-215ENST00000583328 Q8NBF4 154 aa6.89□□□□□ -1.31
TOP3A-215ENST00000583328 SPRR4Q96PI1 79 aa6.89□□□□□ -1.31
TOP3A-215ENST00000583328 TRBV7-6A0A0J9YX20 115 aa6.88□□□□□ -1.31
TOP3A-215ENST00000583328 SPINK1P00995 79 aa6.88□□□□□ -1.31
TOP3A-215ENST00000583328 CFC1BP0CG36 223 aa6.88□□□□□ -1.31
TOP3A-215ENST00000583328 CFC1P0CG37 223 aa6.88□□□□□ -1.31
TOP3A-215ENST00000583328 SMIM11BQ8TCY0 68 aa6.88□□□□□ -1.31
TOP3A-215ENST00000583328 SMCR5Q8TEV8 140 aa6.88□□□□□ -1.31
TOP3A-215ENST00000583328 RAB37Q96AX2 223 aa6.88□□□□□ -1.31
TOP3A-215ENST00000583328 TSTD3H0UI37 97 aa6.87□□□□□ -1.31
TOP3A-215ENST00000583328 COX7BP24311 80 aa6.87□□□□□ -1.31
TOP3A-215ENST00000583328 ELOF1P60002 83 aaKnown RBP6.87□□□□□ -1.31
TOP3A-215ENST00000583328 LCE2CQ5TA81 110 aa6.87□□□□□ -1.31
TOP3A-215ENST00000583328 Q9BRP9 147 aa6.87□□□□□ -1.31
TOP3A-215ENST00000583328 ZNF706Q9Y5V0 76 aaPredicted RBP6.87□□□□□ -1.31
TOP3A-215ENST00000583328 A0A1B0GWB2 263 aa6.86□□□□□ -1.31
TOP3A-215ENST00000583328 DHRS4-AS1Q9P1J3 65 aa6.85□□□□□ -1.31
TOP3A-215ENST00000583328 ERC2-IT1O76042 136 aa6.84□□□□□ -1.31
TOP3A-215ENST00000583328 VAMP3Q15836 100 aa6.84□□□□□ -1.31
TOP3A-215ENST00000583328 NHP2Q9NX24 153 aaKnown RBP6.84□□□□□ -1.31
TOP3A-215ENST00000583328 PRO1854Q9UHT4 67 aa6.84□□□□□ -1.31
TOP3A-215ENST00000583328 H7C2G1 150 aa6.83□□□□□ -1.32
TOP3A-215ENST00000583328 MT1HP80294 61 aa6.83□□□□□ -1.32
TOP3A-215ENST00000583328 BVES-AS1Q5T3Y7 98 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms