RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 C6orf99Q4VX62 202 aa9.21□□□□□ -0.93
SENP3-208ENST00000583277 DNAH8Q96JB1 4490 aa9.21□□□□□ -0.94
SENP3-208ENST00000583277 TRBV20-1A0A075B6N2 111 aa9.2□□□□□ -0.94
SENP3-208ENST00000583277 TRBV7-6A0A0J9YX20 115 aa9.2□□□□□ -0.94
SENP3-208ENST00000583277 H0YGX0 51 aa9.2□□□□□ -0.94
SENP3-208ENST00000583277 UBE2BP63146 152 aa9.2□□□□□ -0.94
SENP3-208ENST00000583277 PHF5AQ7RTV0 110 aaKnown RBP9.2□□□□□ -0.94
SENP3-208ENST00000583277 SPCS1Q9Y6A9 102 aa9.2□□□□□ -0.94
SENP3-208ENST00000583277 GTF2H5Q6ZYL4 71 aa9.18□□□□□ -0.94
SENP3-208ENST00000583277 FAM30AQ9NZY2 134 aa9.18□□□□□ -0.94
SENP3-208ENST00000583277 K7EP34 96 aa9.17□□□□□ -0.94
SENP3-208ENST00000583277 SPRR1AP35321 89 aa9.17□□□□□ -0.94
SENP3-208ENST00000583277 REG3GQ6UW15 175 aa9.17□□□□□ -0.94
SENP3-208ENST00000583277 TCL1BO95988 128 aa9.16□□□□□ -0.94
SENP3-208ENST00000583277 COX7BP24311 80 aa9.16□□□□□ -0.94
SENP3-208ENST00000583277 ATXN8Q156A1 80 aa9.16□□□□□ -0.94
SENP3-208ENST00000583277 ELOF1P60002 83 aaKnown RBP9.16□□□□□ -0.94
SENP3-208ENST00000583277 SCXQ7RTU7 201 aa9.16□□□□□ -0.94
SENP3-208ENST00000583277 CIRBP-AS1Q8TBR5 109 aa9.16□□□□□ -0.94
SENP3-208ENST00000583277 CLEC2BQ92478 149 aa9.16□□□□□ -0.94
SENP3-208ENST00000583277 ETDCA0A1B0GVM5 59 aa9.15□□□□□ -0.95
SENP3-208ENST00000583277 LST1O00453 97 aa9.15□□□□□ -0.95
SENP3-208ENST00000583277 SNCGO76070 127 aa9.14□□□□□ -0.95
SENP3-208ENST00000583277 LRP1BQ9NZR2 4599 aa9.13□□□□□ -0.95
SENP3-208ENST00000583277 A0A1B0GX51 115 aa9.13□□□□□ -0.95
SENP3-208ENST00000583277 KRTAP4-16G5E9R7 235 aaPredicted RBP9.13□□□□□ -0.95
SENP3-208ENST00000583277 SLC25A20O43772 301 aa9.12□□□□□ -0.95
SENP3-208ENST00000583277 TRACP01848 142 aa9.12□□□□□ -0.95
SENP3-208ENST00000583277 FAM218AQ96MZ4 157 aa9.12□□□□□ -0.95
SENP3-208ENST00000583277 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
SENP3-208ENST00000583277 LINC00575Q6W349 94 aa9.12□□□□□ -0.95
SENP3-208ENST00000583277 Q6ZRX8 168 aa9.12□□□□□ -0.95
SENP3-208ENST00000583277 LINC00528Q8N1L1 170 aa9.12□□□□□ -0.95
SENP3-208ENST00000583277 B5MCH6 92 aa9.11□□□□□ -0.95
SENP3-208ENST00000583277 H3BMG7 143 aa9.11□□□□□ -0.95
SENP3-208ENST00000583277 UBE2V1Q13404 147 aa9.11□□□□□ -0.95
SENP3-208ENST00000583277 KRTAP11-1Q8IUC1 163 aa9.11□□□□□ -0.95
SENP3-208ENST00000583277 DNAL4O96015 105 aa9.1□□□□□ -0.95
SENP3-208ENST00000583277 BCE1O60756 84 aa9.09□□□□□ -0.95
SENP3-208ENST00000583277 INAFM2P0DMQ5 153 aa9.09□□□□□ -0.95
SENP3-208ENST00000583277 DHRS4-AS1Q9P1J3 65 aa9.09□□□□□ -0.95
SENP3-208ENST00000583277 hADV29S1A0JD25 119 aa9.08□□□□□ -0.96
SENP3-208ENST00000583277 FAM19A1Q7Z5A9 133 aa9.08□□□□□ -0.96
SENP3-208ENST00000583277 H0Y9J4 135 aa9.07□□□□□ -0.96
SENP3-208ENST00000583277 PSORS1C2Q9UIG4 136 aa9.07□□□□□ -0.96
SENP3-208ENST00000583277 C9JAW5 83 aa9.06□□□□□ -0.96
SENP3-208ENST00000583277 UBE2AP49459 152 aa9.06□□□□□ -0.96
SENP3-208ENST00000583277 HAMPP81172 84 aa9.06□□□□□ -0.96
SENP3-208ENST00000583277 PRLHP81277 87 aa9.04□□□□□ -0.96
SENP3-208ENST00000583277 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.04□□□□□ -0.96
SENP3-208ENST00000583277 Q9BRP9 147 aa9.04□□□□□ -0.96
SENP3-208ENST00000583277 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
SENP3-208ENST00000583277 F8W1H4 67 aa9.03□□□□□ -0.96
SENP3-208ENST00000583277 GHRHP01286 108 aa9.03□□□□□ -0.96
SENP3-208ENST00000583277 KRTAP13-1Q8IUC0 172 aa9.03□□□□□ -0.96
SENP3-208ENST00000583277 ORMDL1Q9P0S3 153 aa9.03□□□□□ -0.96
SENP3-208ENST00000583277 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.97
SENP3-208ENST00000583277 H3BQ85 93 aa9.02□□□□□ -0.97
SENP3-208ENST00000583277 H3BT86 120 aa9.02□□□□□ -0.97
SENP3-208ENST00000583277 XGP55808 180 aa9.02□□□□□ -0.97
SENP3-208ENST00000583277 OCIAD2Q56VL3 154 aa9.02□□□□□ -0.97
SENP3-208ENST00000583277 Q6ZQY7 126 aa9.02□□□□□ -0.97
SENP3-208ENST00000583277 SMCR5Q8TEV8 140 aa9.02□□□□□ -0.97
SENP3-208ENST00000583277 PRO0461Q9UI25 63 aa9.02□□□□□ -0.97
SENP3-208ENST00000583277 MTURNQ8N3F0 131 aa9.01□□□□□ -0.97
SENP3-208ENST00000583277 HIGD2AQ9BW72 106 aa9□□□□□ -0.97
SENP3-208ENST00000583277 BAALC-AS2P0C853 105 aa8.99□□□□□ -0.97
SENP3-208ENST00000583277 ANKRD29Q8N6D5 301 aa8.99□□□□□ -0.97
SENP3-208ENST00000583277 LINC01600Q96MT4 127 aa8.99□□□□□ -0.97
SENP3-208ENST00000583277 ZNF861PO60384 105 aa8.98□□□□□ -0.97
SENP3-208ENST00000583277 IGLV7-43P04211 117 aa8.98□□□□□ -0.97
SENP3-208ENST00000583277 TMEM256-PLSCR3K7ERE1 68 aa8.97□□□□□ -0.97
SENP3-208ENST00000583277 ERC2-IT1O76042 136 aa8.97□□□□□ -0.97
SENP3-208ENST00000583277 PPDPFLQ8WWR9 84 aa8.97□□□□□ -0.97
SENP3-208ENST00000583277 CDK2AP2O75956 126 aa8.96□□□□□ -0.97
SENP3-208ENST00000583277 SMCPP49901 116 aaPredicted RBP8.96□□□□□ -0.97
SENP3-208ENST00000583277 VPS13BQ7Z7G8 4022 aa8.95□□□□□ -0.98
SENP3-208ENST00000583277 EPPK1P58107 5090 aaKnown RBP8.95□□□□□ -0.98
SENP3-208ENST00000583277 IGLV5-48A0A075B6I7 105 aa8.95□□□□□ -0.98
SENP3-208ENST00000583277 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
SENP3-208ENST00000583277 BIRC6Q9NR09 4857 aa8.94□□□□□ -0.98
SENP3-208ENST00000583277 RPL37AP61513 92 aaKnown RBP8.94□□□□□ -0.98
SENP3-208ENST00000583277 ST20-AS1Q8NBB2 130 aa8.93□□□□□ -0.98
SENP3-208ENST00000583277 ZNF706Q9Y5V0 76 aaPredicted RBP8.93□□□□□ -0.98
SENP3-208ENST00000583277 TEX49A0A1B0GTD5 131 aa8.91□□□□□ -0.98
SENP3-208ENST00000583277 LINC01547P58512 204 aaPredicted RBP8.91□□□□□ -0.98
SENP3-208ENST00000583277 DEFB105AQ8NG35 78 aa8.91□□□□□ -0.98
SENP3-208ENST00000583277 SMR3BP02814 79 aaPredicted RBP8.9□□□□□ -0.98
SENP3-208ENST00000583277 TEN1Q86WV5 123 aa8.9□□□□□ -0.98
SENP3-208ENST00000583277 Q8N377 158 aa8.9□□□□□ -0.98
SENP3-208ENST00000583277 ETDBQ3ZM63 59 aa8.89□□□□□ -0.99
SENP3-208ENST00000583277 SPRR1BP22528 89 aa8.88□□□□□ -0.99
SENP3-208ENST00000583277 SPRR4Q96PI1 79 aa8.88□□□□□ -0.99
SENP3-208ENST00000583277 LAMTOR3Q9UHA4 124 aa8.88□□□□□ -0.99
SENP3-208ENST00000583277 HSPG2P98160 4391 aa8.87□□□□□ -0.99
SENP3-208ENST00000583277 JMJD7-PLA2G4BH0Y9G9 81 aa8.86□□□□□ -0.99
SENP3-208ENST00000583277 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
SENP3-208ENST00000583277 GAGE2AQ6NT46 116 aa8.86□□□□□ -0.99
SENP3-208ENST00000583277 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
SENP3-208ENST00000583277 PLA2G1BP04054 148 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms