RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 B5MCH6 92 aa8.88□□□□□ -0.99
SREBF1-221ENST00000583080 C18orf32Q8TCD1 76 aa8.88□□□□□ -0.99
SREBF1-221ENST00000583080 TMEM223A0PJW6 202 aa8.87□□□□□ -0.99
SREBF1-221ENST00000583080 MEIG1Q5JSS6 88 aa8.87□□□□□ -0.99
SREBF1-221ENST00000583080 SSBP3-AS1Q7Z2R9 100 aa8.87□□□□□ -0.99
SREBF1-221ENST00000583080 CHTOPQ9Y3Y2 248 aaKnown RBP8.87□□□□□ -0.99
SREBF1-221ENST00000583080 TRAPPC1Q9Y5R8 145 aa8.87□□□□□ -0.99
SREBF1-221ENST00000583080 LINC00614P0C842 121 aa8.86□□□□□ -0.99
SREBF1-221ENST00000583080 Q9BRP9 147 aa8.86□□□□□ -0.99
SREBF1-221ENST00000583080 C14orf144Q96I85 54 aa8.85□□□□□ -0.99
SREBF1-221ENST00000583080 C20orf202A1L168 122 aa8.84□□□□□ -0.99
SREBF1-221ENST00000583080 PCOTHQ58A44 107 aa8.83□□□□□ -1
SREBF1-221ENST00000583080 C9orf153Q5TBE3 101 aa8.82□□□□□ -1
SREBF1-221ENST00000583080 Q6ZRX8 168 aa8.82□□□□□ -1
SREBF1-221ENST00000583080 CFC1BP0CG36 223 aa8.81□□□□□ -1
SREBF1-221ENST00000583080 LORP23490 312 aaPredicted RBP8.81□□□□□ -1
SREBF1-221ENST00000583080 IGLV8-61A0A075B6I0 122 aa8.8□□□□□ -1
SREBF1-221ENST00000583080 M0R143 59 aa8.8□□□□□ -1
SREBF1-221ENST00000583080 KRTAP10-6P60371 365 aaPredicted RBP8.79□□□□□ -1
SREBF1-221ENST00000583080 HERV-K104P63124 156 aa8.79□□□□□ -1
SREBF1-221ENST00000583080 TRAV12-1A0A0B4J245 112 aa8.78□□□□□ -1
SREBF1-221ENST00000583080 C9orf92A6NGG3 77 aa8.77□□□□□ -1.01
SREBF1-221ENST00000583080 MIEN1Q9BRT3 115 aa8.77□□□□□ -1.01
SREBF1-221ENST00000583080 TSPEAR-AS2P59090 65 aa8.76□□□□□ -1.01
SREBF1-221ENST00000583080 ST20-AS1Q8NBB2 130 aa8.76□□□□□ -1.01
SREBF1-221ENST00000583080 IFI27L1Q96BM0 104 aa8.76□□□□□ -1.01
SREBF1-221ENST00000583080 TRBV10-2A0A0K0K1G8 114 aa8.75□□□□□ -1.01
SREBF1-221ENST00000583080 SCGB1D1O95968 90 aa8.75□□□□□ -1.01
SREBF1-221ENST00000583080 MAP1LC3CQ9BXW4 147 aa8.75□□□□□ -1.01
SREBF1-221ENST00000583080 LOC107984156A0A0G2JMH3 177 aa8.74□□□□□ -1.01
SREBF1-221ENST00000583080 MYMXA0A1B0GTQ4 84 aa8.74□□□□□ -1.01
SREBF1-221ENST00000583080 ARL17AQ8IVW1 177 aa8.74□□□□□ -1.01
SREBF1-221ENST00000583080 VAMP8Q9BV40 100 aa8.74□□□□□ -1.01
SREBF1-221ENST00000583080 SPANXB1Q9NS25 103 aaPredicted RBP8.73□□□□□ -1.01
SREBF1-221ENST00000583080 IGLV6-57P01721 117 aa8.72□□□□□ -1.01
SREBF1-221ENST00000583080 HRCT1Q6UXD1 115 aa8.72□□□□□ -1.01
SREBF1-221ENST00000583080 TRAV23DV6A0A075B6W5 121 aa8.71□□□□□ -1.02
SREBF1-221ENST00000583080 CHCHD1Q96BP2 118 aaKnown RBP8.71□□□□□ -1.02
SREBF1-221ENST00000583080 UQCR10Q9UDW1 63 aa8.71□□□□□ -1.02
SREBF1-221ENST00000583080 SERF1AO75920 110 aa8.7□□□□□ -1.02
SREBF1-221ENST00000583080 S100A7L2Q5SY68 101 aa8.7□□□□□ -1.02
SREBF1-221ENST00000583080 PET117Q6UWS5 81 aa8.7□□□□□ -1.02
SREBF1-221ENST00000583080 COL5A1-AS1Q5SY13 56 aa8.69□□□□□ -1.02
SREBF1-221ENST00000583080 LIMD2Q9BT23 127 aa8.69□□□□□ -1.02
SREBF1-221ENST00000583080 FLGP20930 4061 aaPredicted RBP8.68□□□□□ -1.02
SREBF1-221ENST00000583080 ZNF73O43830 326 aaPredicted RBP8.68□□□□□ -1.02
SREBF1-221ENST00000583080 PRO1933Q9H354 126 aa8.68□□□□□ -1.02
SREBF1-221ENST00000583080 H0Y8G0 127 aa8.67□□□□□ -1.02
SREBF1-221ENST00000583080 M0R2T5 61 aa8.67□□□□□ -1.02
SREBF1-221ENST00000583080 LEPROTO15243 131 aa8.67□□□□□ -1.02
SREBF1-221ENST00000583080 EIF4EBP3O60516 100 aaPredicted RBP8.67□□□□□ -1.02
SREBF1-221ENST00000583080 SOSTDC1Q6X4U4 206 aa8.67□□□□□ -1.02
SREBF1-221ENST00000583080 NDUFC2O95298 119 aa8.66□□□□□ -1.02
SREBF1-221ENST00000583080 SNHG12Q9BXW3 62 aa8.66□□□□□ -1.02
SREBF1-221ENST00000583080 A0A1B0GV90 55 aa8.65□□□□□ -1.02
SREBF1-221ENST00000583080 HSBP1O75506 76 aa8.65□□□□□ -1.02
SREBF1-221ENST00000583080 LINC00310P59036 64 aa8.65□□□□□ -1.02
SREBF1-221ENST00000583080 NPC2P61916 151 aa8.65□□□□□ -1.02
SREBF1-221ENST00000583080 J3QQQ9 107 aa8.64□□□□□ -1.03
SREBF1-221ENST00000583080 SPRR1BP22528 89 aa8.64□□□□□ -1.03
SREBF1-221ENST00000583080 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
SREBF1-221ENST00000583080 HSPB8Q9UJY1 196 aa8.62□□□□□ -1.03
SREBF1-221ENST00000583080 DLEU1O43261 78 aa8.61□□□□□ -1.03
SREBF1-221ENST00000583080 COX6B2Q6YFQ2 88 aa8.61□□□□□ -1.03
SREBF1-221ENST00000583080 H7C2G1 150 aa8.6□□□□□ -1.03
SREBF1-221ENST00000583080 NMUP48645 174 aa8.6□□□□□ -1.03
SREBF1-221ENST00000583080 SPATA45Q537H7 98 aa8.6□□□□□ -1.03
SREBF1-221ENST00000583080 ADAMTSL4-AS1Q5T5F5 129 aa8.6□□□□□ -1.03
SREBF1-221ENST00000583080 HSBP1L1C9JCN9 74 aa8.59□□□□□ -1.03
SREBF1-221ENST00000583080 C3orf79P0CE67 100 aa8.59□□□□□ -1.03
SREBF1-221ENST00000583080 LGALS3P17931 250 aaKnown RBP8.59□□□□□ -1.03
SREBF1-221ENST00000583080 KRTDAPP60985 99 aa8.59□□□□□ -1.03
SREBF1-221ENST00000583080 LAMTOR3Q9UHA4 124 aa8.59□□□□□ -1.03
SREBF1-221ENST00000583080 PLNP26678 52 aa8.58□□□□□ -1.04
SREBF1-221ENST00000583080 RPL37P61927 97 aaKnown RBP8.58□□□□□ -1.04
SREBF1-221ENST00000583080 SLC25A34Q6PIV7 304 aa8.58□□□□□ -1.04
SREBF1-221ENST00000583080 HINT1P49773 126 aaPredicted RBP8.57□□□□□ -1.04
SREBF1-221ENST00000583080 HERVK_113P61574 105 aa8.57□□□□□ -1.04
SREBF1-221ENST00000583080 Q1RN00 199 aa8.57□□□□□ -1.04
SREBF1-221ENST00000583080 PAM16Q9Y3D7 125 aa8.57□□□□□ -1.04
SREBF1-221ENST00000583080 A0A0J9YXY3 114 aa8.56□□□□□ -1.04
SREBF1-221ENST00000583080 CBY1Q9Y3M2 126 aa8.56□□□□□ -1.04
SREBF1-221ENST00000583080 DPM2O94777 84 aa8.55□□□□□ -1.04
SREBF1-221ENST00000583080 LEPROTL1O95214 131 aa8.55□□□□□ -1.04
SREBF1-221ENST00000583080 CD164Q04900 197 aa8.55□□□□□ -1.04
SREBF1-221ENST00000583080 C1orf195Q5TG92 126 aa8.55□□□□□ -1.04
SREBF1-221ENST00000583080 DHRS4-AS1Q9P1J3 65 aa8.55□□□□□ -1.04
SREBF1-221ENST00000583080 OR13C6PQ8NH95 151 aa8.54□□□□□ -1.04
SREBF1-221ENST00000583080 A0A0G2JQZ4 141 aa8.53□□□□□ -1.04
SREBF1-221ENST00000583080 KRTAP9-7A8MTY7 169 aa8.53□□□□□ -1.04
SREBF1-221ENST00000583080 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.53□□□□□ -1.04
SREBF1-221ENST00000583080 SYS1-DBNDD2H3BUS1 97 aa8.53□□□□□ -1.04
SREBF1-221ENST00000583080 IGKCP01834 107 aa8.52□□□□□ -1.05
SREBF1-221ENST00000583080 LINC01545Q5VT33 79 aa8.52□□□□□ -1.05
SREBF1-221ENST00000583080 Q5XG85 94 aa8.52□□□□□ -1.05
SREBF1-221ENST00000583080 DEFB105AQ8NG35 78 aa8.52□□□□□ -1.05
SREBF1-221ENST00000583080 ELOF1P60002 83 aaKnown RBP8.51□□□□□ -1.05
SREBF1-221ENST00000583080 LITAFQ99732 161 aa8.51□□□□□ -1.05
SREBF1-221ENST00000583080 SPANXCQ9NY87 97 aa8.51□□□□□ -1.05
SREBF1-221ENST00000583080 COX7BP24311 80 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms