RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 PRLHP81277 87 aa12.15□□□□□ -0.46
TOP3A-213ENST00000582230 ABCA13Q86UQ4 5058 aa12.14□□□□□ -0.47
TOP3A-213ENST00000582230 TRAV13-2A0A0B4J235 113 aa12.14□□□□□ -0.47
TOP3A-213ENST00000582230 A4D1N5 150 aa12.14□□□□□ -0.47
TOP3A-213ENST00000582230 KRTAP29-1A8MX34 341 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-213ENST00000582230 KRTAP4-16G5E9R7 235 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-213ENST00000582230 A6NDN8 102 aa12.13□□□□□ -0.47
TOP3A-213ENST00000582230 ZNF73O43830 326 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-213ENST00000582230 TAL2Q16559 108 aa12.13□□□□□ -0.47
TOP3A-213ENST00000582230 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
TOP3A-213ENST00000582230 FLG2Q5D862 2391 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-213ENST00000582230 HINT1P49773 126 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-213ENST00000582230 B5MCH6 92 aa12.09□□□□□ -0.47
TOP3A-213ENST00000582230 LINC01600Q96MT4 127 aa12.08□□□□□ -0.48
TOP3A-213ENST00000582230 Q6ZRX8 168 aa12.07□□□□□ -0.48
TOP3A-213ENST00000582230 CEND1Q8N111 149 aa12.07□□□□□ -0.48
TOP3A-213ENST00000582230 HIGD2AQ9BW72 106 aa12.07□□□□□ -0.48
TOP3A-213ENST00000582230 J3QL48 77 aa12.05□□□□□ -0.48
TOP3A-213ENST00000582230 HSD52Q0P140 79 aa12.04□□□□□ -0.48
TOP3A-213ENST00000582230 C6orf99Q4VX62 202 aa12.04□□□□□ -0.48
TOP3A-213ENST00000582230 C12orf57Q99622 126 aa12.04□□□□□ -0.48
TOP3A-213ENST00000582230 TRBV7-6A0A0J9YX20 115 aa12.03□□□□□ -0.48
TOP3A-213ENST00000582230 TMEM238LA0A1B0GVL6 79 aa12.03□□□□□ -0.48
TOP3A-213ENST00000582230 A6NJY4 79 aa12.03□□□□□ -0.48
TOP3A-213ENST00000582230 KRTAP1-4P0C5Y4 121 aa12.03□□□□□ -0.48
TOP3A-213ENST00000582230 SMCR5Q8TEV8 140 aa12.02□□□□□ -0.49
TOP3A-213ENST00000582230 CFC1BP0CG36 223 aa12.01□□□□□ -0.49
TOP3A-213ENST00000582230 CFC1P0CG37 223 aa12.01□□□□□ -0.49
TOP3A-213ENST00000582230 COX7BP24311 80 aa12.01□□□□□ -0.49
TOP3A-213ENST00000582230 SMIM11BQ8TCY0 68 aa12.01□□□□□ -0.49
TOP3A-213ENST00000582230 PRO1933Q9H354 126 aa12.01□□□□□ -0.49
TOP3A-213ENST00000582230 PKHD1L1Q86WI1 4243 aa12□□□□□ -0.49
TOP3A-213ENST00000582230 A0A0B4J2C4 111 aa12□□□□□ -0.49
TOP3A-213ENST00000582230 RPL13AP40429 203 aaKnown RBP12□□□□□ -0.49
TOP3A-213ENST00000582230 ELOF1P60002 83 aaKnown RBP12□□□□□ -0.49
TOP3A-213ENST00000582230 RAB37Q96AX2 223 aa12□□□□□ -0.49
TOP3A-213ENST00000582230 Q9BRP9 147 aa12□□□□□ -0.49
TOP3A-213ENST00000582230 ZNF706Q9Y5V0 76 aaPredicted RBP12□□□□□ -0.49
TOP3A-213ENST00000582230 A0A1B0GWB2 263 aa11.98□□□□□ -0.49
TOP3A-213ENST00000582230 FXYD2P54710 66 aa11.98□□□□□ -0.49
TOP3A-213ENST00000582230 DHRS4-AS1Q9P1J3 65 aa11.98□□□□□ -0.49
TOP3A-213ENST00000582230 MYCBP2O75592 4640 aa11.98□□□□□ -0.49
TOP3A-213ENST00000582230 MT1HL1P0DM35 61 aa11.97□□□□□ -0.49
TOP3A-213ENST00000582230 KRTAP10-8P60410 259 aa11.96□□□□□ -0.49
TOP3A-213ENST00000582230 VAMP3Q15836 100 aa11.96□□□□□ -0.49
TOP3A-213ENST00000582230 SPRR4Q96PI1 79 aa11.96□□□□□ -0.49
TOP3A-213ENST00000582230 ERC2-IT1O76042 136 aa11.95□□□□□ -0.5
TOP3A-213ENST00000582230 FAM229BQ4G0N7 80 aa11.95□□□□□ -0.5
TOP3A-213ENST00000582230 PRR26Q8N8Z3 221 aa11.95□□□□□ -0.5
TOP3A-213ENST00000582230 TSTD3H0UI37 97 aa11.94□□□□□ -0.5
TOP3A-213ENST00000582230 CRYGAP11844 174 aa11.94□□□□□ -0.5
TOP3A-213ENST00000582230 PRO1854Q9UHT4 67 aa11.93□□□□□ -0.5
TOP3A-213ENST00000582230 ANAPC11Q9NYG5 84 aa11.92□□□□□ -0.5
TOP3A-213ENST00000582230 LRP1Q07954 4544 aaKnown RBP11.9□□□□□ -0.5
TOP3A-213ENST00000582230 H7C2G1 150 aa11.9□□□□□ -0.5
TOP3A-213ENST00000582230 BVES-AS1Q5T3Y7 98 aa11.9□□□□□ -0.5
TOP3A-213ENST00000582230 NHP2Q9NX24 153 aaKnown RBP11.9□□□□□ -0.5
TOP3A-213ENST00000582230 A0A087X002 238 aa11.89□□□□□ -0.51
TOP3A-213ENST00000582230 CTAG1AP78358 180 aa11.88□□□□□ -0.51
TOP3A-213ENST00000582230 LINC00483Q53H64 154 aa11.88□□□□□ -0.51
TOP3A-213ENST00000582230 GAGE2AQ6NT46 116 aa11.88□□□□□ -0.51
TOP3A-213ENST00000582230 Q1RN00 199 aa11.87□□□□□ -0.51
TOP3A-213ENST00000582230 SLC25A20O43772 301 aa11.86□□□□□ -0.51
TOP3A-213ENST00000582230 FAT3Q8TDW7 4589 aa11.86□□□□□ -0.51
TOP3A-213ENST00000582230 M0R143 59 aa11.85□□□□□ -0.51
TOP3A-213ENST00000582230 LINC00575Q6W349 94 aa11.85□□□□□ -0.51
TOP3A-213ENST00000582230 ST20-AS1Q8NBB2 130 aa11.85□□□□□ -0.51
TOP3A-213ENST00000582230 TYMSOSQ8TAI1 123 aa11.85□□□□□ -0.51
TOP3A-213ENST00000582230 DMBT1Q9UGM3 2413 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-213ENST00000582230 KRTAP13-2Q52LG2 175 aa11.83□□□□□ -0.52
TOP3A-213ENST00000582230 H0YGX0 51 aa11.82□□□□□ -0.52
TOP3A-213ENST00000582230 K7ERJ3 54 aa11.82□□□□□ -0.52
TOP3A-213ENST00000582230 SPRR1BP22528 89 aa11.81□□□□□ -0.52
TOP3A-213ENST00000582230 hADV29S1A0JD25 119 aa11.8□□□□□ -0.52
TOP3A-213ENST00000582230 TEX49A0A1B0GTD5 131 aa11.78□□□□□ -0.52
TOP3A-213ENST00000582230 SNCGO76070 127 aa11.78□□□□□ -0.52
TOP3A-213ENST00000582230 C3orf22Q8N5N4 141 aa11.77□□□□□ -0.53
TOP3A-213ENST00000582230 DEFB105AQ8NG35 78 aa11.77□□□□□ -0.53
TOP3A-213ENST00000582230 HERC1Q15751 4861 aa11.77□□□□□ -0.53
TOP3A-213ENST00000582230 IGLV5-48A0A075B6I7 105 aa11.76□□□□□ -0.53
TOP3A-213ENST00000582230 TRIAP1O43715 76 aa11.76□□□□□ -0.53
TOP3A-213ENST00000582230 TSPAN13O95857 204 aa11.75□□□□□ -0.53
TOP3A-213ENST00000582230 PSMB2P49721 201 aa11.75□□□□□ -0.53
TOP3A-213ENST00000582230 COX6CP09669 75 aa11.74□□□□□ -0.53
TOP3A-213ENST00000582230 LAMTOR3Q9UHA4 124 aa11.74□□□□□ -0.53
TOP3A-213ENST00000582230 IGLV9-49A0A0B4J1Y8 123 aa11.73□□□□□ -0.53
TOP3A-213ENST00000582230 LINC01547P58512 204 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-213ENST00000582230 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-213ENST00000582230 Q6ZQY7 126 aa11.73□□□□□ -0.53
TOP3A-213ENST00000582230 A0A1B0GX51 115 aa11.72□□□□□ -0.53
TOP3A-213ENST00000582230 SSBP3-AS1Q7Z2R9 100 aa11.72□□□□□ -0.53
TOP3A-213ENST00000582230 MOBPQ13875 183 aa11.71□□□□□ -0.53
TOP3A-213ENST00000582230 Q8N377 158 aa11.7□□□□□ -0.54
TOP3A-213ENST00000582230 LINC00304Q8N9R0 145 aa11.7□□□□□ -0.54
TOP3A-213ENST00000582230 FAM218AQ96MZ4 157 aa11.7□□□□□ -0.54
TOP3A-213ENST00000582230 C9orf153Q5TBE3 101 aa11.69□□□□□ -0.54
TOP3A-213ENST00000582230 TNXBP22105 4242 aa11.68□□□□□ -0.54
TOP3A-213ENST00000582230 Q8NBF4 154 aa11.68□□□□□ -0.54
TOP3A-213ENST00000582230 BATFQ16520 125 aa11.67□□□□□ -0.54
TOP3A-213ENST00000582230 OCIAD2Q56VL3 154 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms