RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CTAG1AP78358 180 aa11.29□□□□□ -0.6
SREBF1-220ENST00000581707 Q6ZRX8 168 aa11.29□□□□□ -0.6
SREBF1-220ENST00000581707 TRAV23DV6A0A075B6W5 121 aa11.28□□□□□ -0.6
SREBF1-220ENST00000581707 ERC2-IT1O76042 136 aa11.27□□□□□ -0.61
SREBF1-220ENST00000581707 Q9BRP9 147 aa11.27□□□□□ -0.61
SREBF1-220ENST00000581707 SPANXCQ9NY87 97 aa11.27□□□□□ -0.61
SREBF1-220ENST00000581707 LINC00483Q53H64 154 aa11.26□□□□□ -0.61
SREBF1-220ENST00000581707 GAGE2AQ6NT46 116 aa11.26□□□□□ -0.61
SREBF1-220ENST00000581707 RETNLBQ9BQ08 111 aa11.26□□□□□ -0.61
SREBF1-220ENST00000581707 ZNF73O43830 326 aaPredicted RBP11.25□□□□□ -0.61
SREBF1-220ENST00000581707 SPAG11AQ6PDA7 123 aa11.25□□□□□ -0.61
SREBF1-220ENST00000581707 CBY1Q9Y3M2 126 aa11.25□□□□□ -0.61
SREBF1-220ENST00000581707 JOSD1Q15040 202 aaPredicted RBP11.24□□□□□ -0.61
SREBF1-220ENST00000581707 S100A1P23297 94 aa11.23□□□□□ -0.61
SREBF1-220ENST00000581707 ANKRD39Q53RE8 183 aa11.23□□□□□ -0.61
SREBF1-220ENST00000581707 C4orf48Q5BLP8 95 aa11.23□□□□□ -0.61
SREBF1-220ENST00000581707 ATOH7Q8N100 152 aa11.23□□□□□ -0.61
SREBF1-220ENST00000581707 OR13C6PQ8NH95 151 aa11.23□□□□□ -0.61
SREBF1-220ENST00000581707 AKR1D1P51857 326 aa11.22□□□□□ -0.61
SREBF1-220ENST00000581707 SCGB1D4Q6XE38 83 aa11.22□□□□□ -0.61
SREBF1-220ENST00000581707 Q8NBF4 154 aa11.22□□□□□ -0.61
SREBF1-220ENST00000581707 HINT1P49773 126 aaPredicted RBP11.21□□□□□ -0.61
SREBF1-220ENST00000581707 SPANXDQ9BXN6 97 aa11.2□□□□□ -0.62
SREBF1-220ENST00000581707 LINC00518Q8N0U6 118 aa11.19□□□□□ -0.62
SREBF1-220ENST00000581707 IGLV9-49A0A0B4J1Y8 123 aa11.17□□□□□ -0.62
SREBF1-220ENST00000581707 HIST3H2BBQ8N257 126 aa11.17□□□□□ -0.62
SREBF1-220ENST00000581707 S100A2P29034 98 aa11.16□□□□□ -0.62
SREBF1-220ENST00000581707 MOBPQ13875 183 aa11.16□□□□□ -0.62
SREBF1-220ENST00000581707 PCP2Q8IVA1 136 aa11.16□□□□□ -0.62
SREBF1-220ENST00000581707 COPS9Q8WXC6 57 aa11.16□□□□□ -0.62
SREBF1-220ENST00000581707 IGLV7-46A0A075B6I9 117 aa11.15□□□□□ -0.62
SREBF1-220ENST00000581707 SSBP3-AS1Q7Z2R9 100 aa11.15□□□□□ -0.62
SREBF1-220ENST00000581707 HIST1H2BLQ99880 126 aa11.15□□□□□ -0.62
SREBF1-220ENST00000581707 C5orf52A6NGY3 159 aa11.14□□□□□ -0.63
SREBF1-220ENST00000581707 SPINK1P00995 79 aa11.14□□□□□ -0.63
SREBF1-220ENST00000581707 IFITM1P13164 125 aa11.14□□□□□ -0.63
SREBF1-220ENST00000581707 SNRPEP62304 92 aaKnown RBP11.14□□□□□ -0.63
SREBF1-220ENST00000581707 ST20-AS1Q8NBB2 130 aa11.14□□□□□ -0.63
SREBF1-220ENST00000581707 Q6ZVH6 145 aa11.13□□□□□ -0.63
SREBF1-220ENST00000581707 DHRS4-AS1Q9P1J3 65 aa11.12□□□□□ -0.63
SREBF1-220ENST00000581707 S100A6P06703 90 aa11.11□□□□□ -0.63
SREBF1-220ENST00000581707 TPRXLQ17RH7 258 aa11.11□□□□□ -0.63
SREBF1-220ENST00000581707 C6orf99Q4VX62 202 aa11.1□□□□□ -0.63
SREBF1-220ENST00000581707 MUSTN1Q8IVN3 82 aa11.1□□□□□ -0.63
SREBF1-220ENST00000581707 COX7BP24311 80 aa11.09□□□□□ -0.63
SREBF1-220ENST00000581707 ELOF1P60002 83 aaKnown RBP11.09□□□□□ -0.63
SREBF1-220ENST00000581707 C9orf153Q5TBE3 101 aa11.08□□□□□ -0.64
SREBF1-220ENST00000581707 FP248Q71RG6 208 aaPredicted RBP11.08□□□□□ -0.64
SREBF1-220ENST00000581707 CDIP1Q9H305 208 aa11.08□□□□□ -0.64
SREBF1-220ENST00000581707 A6NDN8 102 aa11.07□□□□□ -0.64
SREBF1-220ENST00000581707 HSBP1L1C9JCN9 74 aa11.07□□□□□ -0.64
SREBF1-220ENST00000581707 SPRR1BP22528 89 aa11.05□□□□□ -0.64
SREBF1-220ENST00000581707 RPS29P62273 56 aaKnown RBP11.05□□□□□ -0.64
SREBF1-220ENST00000581707 TRBV7-6A0A0J9YX20 115 aa11.04□□□□□ -0.64
SREBF1-220ENST00000581707 SLC25A34Q6PIV7 304 aa11.04□□□□□ -0.64
SREBF1-220ENST00000581707 MUC2Q02817 5179 aa11.03□□□□□ -0.64
SREBF1-220ENST00000581707 TRAV13-2A0A0B4J235 113 aa11.01□□□□□ -0.65
SREBF1-220ENST00000581707 A0A1B0GWB2 263 aa11.01□□□□□ -0.65
SREBF1-220ENST00000581707 Q8N377 158 aa11.01□□□□□ -0.65
SREBF1-220ENST00000581707 TAL2Q16559 108 aa11□□□□□ -0.65
SREBF1-220ENST00000581707 LAMTOR3Q9UHA4 124 aa11□□□□□ -0.65
SREBF1-220ENST00000581707 SLC25A20O43772 301 aa10.99□□□□□ -0.65
SREBF1-220ENST00000581707 SCGB1D1O95968 90 aa10.99□□□□□ -0.65
SREBF1-220ENST00000581707 DEFB105AQ8NG35 78 aa10.99□□□□□ -0.65
SREBF1-220ENST00000581707 SMIM11BQ8TCY0 68 aa10.97□□□□□ -0.65
SREBF1-220ENST00000581707 TEX49A0A1B0GTD5 131 aa10.96□□□□□ -0.65
SREBF1-220ENST00000581707 A4D1N5 150 aa10.96□□□□□ -0.65
SREBF1-220ENST00000581707 KRTAP13-3Q3SY46 172 aa10.96□□□□□ -0.65
SREBF1-220ENST00000581707 Q1RN00 199 aa10.94□□□□□ -0.66
SREBF1-220ENST00000581707 A0A0U1RQV1 116 aa10.91□□□□□ -0.66
SREBF1-220ENST00000581707 HRCT1Q6UXD1 115 aa10.91□□□□□ -0.66
SREBF1-220ENST00000581707 NHP2Q9NX24 153 aaKnown RBP10.91□□□□□ -0.66
SREBF1-220ENST00000581707 IGLV5-48A0A075B6I7 105 aa10.9□□□□□ -0.66
SREBF1-220ENST00000581707 LINC01547P58512 204 aaPredicted RBP10.9□□□□□ -0.66
SREBF1-220ENST00000581707 VAMP3Q15836 100 aa10.9□□□□□ -0.66
SREBF1-220ENST00000581707 SMIM29Q86T20 159 aa10.9□□□□□ -0.66
SREBF1-220ENST00000581707 COX8AP10176 69 aa10.89□□□□□ -0.67
SREBF1-220ENST00000581707 PRO1933Q9H354 126 aa10.89□□□□□ -0.67
SREBF1-220ENST00000581707 HIST1H4GQ99525 98 aa10.88□□□□□ -0.67
SREBF1-220ENST00000581707 LIMD2Q9BT23 127 aa10.88□□□□□ -0.67
SREBF1-220ENST00000581707 MUC17Q685J3 4493 aa10.86□□□□□ -0.67
SREBF1-220ENST00000581707 DLEU1O43261 78 aa10.85□□□□□ -0.67
SREBF1-220ENST00000581707 CD164Q04900 197 aa10.85□□□□□ -0.67
SREBF1-220ENST00000581707 LINC00575Q6W349 94 aa10.84□□□□□ -0.67
SREBF1-220ENST00000581707 H7C2G1 150 aa10.83□□□□□ -0.68
SREBF1-220ENST00000581707 C12orf57Q99622 126 aa10.83□□□□□ -0.68
SREBF1-220ENST00000581707 C14orf144Q96I85 54 aa10.82□□□□□ -0.68
SREBF1-220ENST00000581707 ASB16-AS1Q495Z4 193 aa10.81□□□□□ -0.68
SREBF1-220ENST00000581707 PAM16Q9Y3D7 125 aa10.81□□□□□ -0.68
SREBF1-220ENST00000581707 hADV29S1A0JD25 119 aa10.8□□□□□ -0.68
SREBF1-220ENST00000581707 SPATA45Q537H7 98 aa10.8□□□□□ -0.68
SREBF1-220ENST00000581707 A0A0G2JQZ4 141 aa10.78□□□□□ -0.68
SREBF1-220ENST00000581707 Q6ZQY7 126 aa10.78□□□□□ -0.68
SREBF1-220ENST00000581707 SEC61BP60468 96 aaKnown RBP10.77□□□□□ -0.69
SREBF1-220ENST00000581707 VAMP8Q9BV40 100 aa10.77□□□□□ -0.69
SREBF1-220ENST00000581707 HIGD1BQ9P298 99 aa10.77□□□□□ -0.69
SREBF1-220ENST00000581707 F8WEM9 126 aa10.76□□□□□ -0.69
SREBF1-220ENST00000581707 BVES-AS1Q5T3Y7 98 aa10.76□□□□□ -0.69
SREBF1-220ENST00000581707 Q5XG85 94 aa10.76□□□□□ -0.69
SREBF1-220ENST00000581707 XP32Q5T750 250 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms