RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PRYO14603 147 aa6.44□□□□□ -1.38
CCDC47-203ENST00000580986 NCR3O14931 201 aa6.44□□□□□ -1.38
CCDC47-203ENST00000580986 PLA2G1BP04054 148 aaKnown RBP6.44□□□□□ -1.38
CCDC47-203ENST00000580986 HNRNPA3P51991 378 aaKnown RBP6.44□□□□□ -1.38
CCDC47-203ENST00000580986 CEND1Q8N111 149 aa6.44□□□□□ -1.38
CCDC47-203ENST00000580986 TMEM126AQ9H061 195 aa6.44□□□□□ -1.38
CCDC47-203ENST00000580986 KCNQ1DNQ9H478 68 aa6.44□□□□□ -1.38
CCDC47-203ENST00000580986 TRAV13-2A0A0B4J235 113 aa6.43□□□□□ -1.38
CCDC47-203ENST00000580986 A4D1N5 150 aa6.43□□□□□ -1.38
CCDC47-203ENST00000580986 SMR3BP02814 79 aaPredicted RBP6.43□□□□□ -1.38
CCDC47-203ENST00000580986 DDTP30046 118 aa6.43□□□□□ -1.38
CCDC47-203ENST00000580986 KRTAP10-4P60372 401 aaPredicted RBP6.43□□□□□ -1.38
CCDC47-203ENST00000580986 RPL37AP61513 92 aaKnown RBP6.43□□□□□ -1.38
CCDC47-203ENST00000580986 PRR3P79522 188 aaKnown RBP6.43□□□□□ -1.38
CCDC47-203ENST00000580986 PSORS1C2Q9UIG4 136 aa6.43□□□□□ -1.38
CCDC47-203ENST00000580986 FAT1Q14517 4588 aa6.43□□□□□ -1.38
CCDC47-203ENST00000580986 TRBV10-3A0A0K0K1G6 114 aa6.42□□□□□ -1.38
CCDC47-203ENST00000580986 SPRR1AP35321 89 aa6.42□□□□□ -1.38
CCDC47-203ENST00000580986 S100A7L2Q5SY68 101 aa6.42□□□□□ -1.38
CCDC47-203ENST00000580986 Q5VSD8 79 aa6.42□□□□□ -1.38
CCDC47-203ENST00000580986 KRTAP11-1Q8IUC1 163 aa6.42□□□□□ -1.38
CCDC47-203ENST00000580986 LINC00337Q8N6G1 96 aa6.42□□□□□ -1.38
CCDC47-203ENST00000580986 PRO1933Q9H354 126 aa6.42□□□□□ -1.38
CCDC47-203ENST00000580986 VPS13BQ7Z7G8 4022 aa6.42□□□□□ -1.38
CCDC47-203ENST00000580986 A0A0B4J2C4 111 aa6.41□□□□□ -1.38
CCDC47-203ENST00000580986 GAGE10A6NGK3 116 aa6.41□□□□□ -1.38
CCDC47-203ENST00000580986 RPL37AP8A6NKH3 93 aa6.41□□□□□ -1.38
CCDC47-203ENST00000580986 BCE1O60756 84 aa6.41□□□□□ -1.38
CCDC47-203ENST00000580986 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
CCDC47-203ENST00000580986 REG3GQ6UW15 175 aa6.41□□□□□ -1.38
CCDC47-203ENST00000580986 H0Y9J4 135 aa6.4□□□□□ -1.38
CCDC47-203ENST00000580986 TRAV23DV6A0A075B6W5 121 aa6.39□□□□□ -1.39
CCDC47-203ENST00000580986 A0A1B0GWB2 263 aa6.39□□□□□ -1.39
CCDC47-203ENST00000580986 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
CCDC47-203ENST00000580986 C1orf137Q5JT78 98 aa6.39□□□□□ -1.39
CCDC47-203ENST00000580986 TRBV7-6A0A0J9YX20 115 aa6.38□□□□□ -1.39
CCDC47-203ENST00000580986 M0R143 59 aa6.38□□□□□ -1.39
CCDC47-203ENST00000580986 IGLV7-43P04211 117 aa6.38□□□□□ -1.39
CCDC47-203ENST00000580986 CFC1BP0CG36 223 aa6.38□□□□□ -1.39
CCDC47-203ENST00000580986 CFC1P0CG37 223 aa6.38□□□□□ -1.39
CCDC47-203ENST00000580986 FXYD2P54710 66 aa6.38□□□□□ -1.39
CCDC47-203ENST00000580986 KRTAP13-1Q8IUC0 172 aa6.38□□□□□ -1.39
CCDC47-203ENST00000580986 OR13C6PQ8NH95 151 aa6.38□□□□□ -1.39
CCDC47-203ENST00000580986 A6NDN8 102 aa6.37□□□□□ -1.39
CCDC47-203ENST00000580986 ZNF73O43830 326 aaPredicted RBP6.37□□□□□ -1.39
CCDC47-203ENST00000580986 HERC2O95714 4834 aa6.36□□□□□ -1.39
CCDC47-203ENST00000580986 ZNF861PO60384 105 aa6.36□□□□□ -1.39
CCDC47-203ENST00000580986 RPL28P46779 137 aaKnown RBP6.36□□□□□ -1.39
CCDC47-203ENST00000580986 SPINK6Q6UWN8 80 aa6.36□□□□□ -1.39
CCDC47-203ENST00000580986 DIRC1Q969H9 104 aa6.36□□□□□ -1.39
CCDC47-203ENST00000580986 SRRM2Q9UQ35 2752 aaKnown RBP6.35□□□□□ -1.39
CCDC47-203ENST00000580986 HINT1P49773 126 aaPredicted RBP6.35□□□□□ -1.39
CCDC47-203ENST00000580986 CTAG1AP78358 180 aa6.35□□□□□ -1.39
CCDC47-203ENST00000580986 BVES-AS1Q5T3Y7 98 aa6.35□□□□□ -1.39
CCDC47-203ENST00000580986 RAB37Q96AX2 223 aa6.35□□□□□ -1.39
CCDC47-203ENST00000580986 PRO1854Q9UHT4 67 aa6.35□□□□□ -1.39
CCDC47-203ENST00000580986 ETDCA0A1B0GVM5 59 aa6.34□□□□□ -1.39
CCDC47-203ENST00000580986 B5MCH6 92 aa6.34□□□□□ -1.39
CCDC47-203ENST00000580986 RPL13AP40429 203 aaKnown RBP6.34□□□□□ -1.39
CCDC47-203ENST00000580986 Q6ZRX8 168 aa6.34□□□□□ -1.39
CCDC47-203ENST00000580986 FAM19A1Q7Z5A9 133 aa6.34□□□□□ -1.39
CCDC47-203ENST00000580986 SMIM11BQ8TCY0 68 aa6.34□□□□□ -1.39
CCDC47-203ENST00000580986 UBE2AP49459 152 aa6.33□□□□□ -1.4
CCDC47-203ENST00000580986 ELOF1P60002 83 aaKnown RBP6.33□□□□□ -1.4
CCDC47-203ENST00000580986 C6orf99Q4VX62 202 aa6.33□□□□□ -1.4
CCDC47-203ENST00000580986 NHP2Q9NX24 153 aaKnown RBP6.33□□□□□ -1.4
CCDC47-203ENST00000580986 INAFM2P0DMQ5 153 aa6.31□□□□□ -1.4
CCDC47-203ENST00000580986 PRLHP81277 87 aa6.31□□□□□ -1.4
CCDC47-203ENST00000580986 COX7BP24311 80 aa6.3□□□□□ -1.4
CCDC47-203ENST00000580986 VAMP3Q15836 100 aa6.3□□□□□ -1.4
CCDC47-203ENST00000580986 DHRS4-AS1Q9P1J3 65 aa6.3□□□□□ -1.4
CCDC47-203ENST00000580986 Q9BRP9 147 aa6.29□□□□□ -1.4
CCDC47-203ENST00000580986 H0YGX0 51 aa6.28□□□□□ -1.4
CCDC47-203ENST00000580986 SMCR5Q8TEV8 140 aa6.28□□□□□ -1.4
CCDC47-203ENST00000580986 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
CCDC47-203ENST00000580986 PKHD1L1Q86WI1 4243 aa6.28□□□□□ -1.4
CCDC47-203ENST00000580986 K7ERJ3 54 aa6.27□□□□□ -1.41
CCDC47-203ENST00000580986 HIGD2AQ9BW72 106 aa6.27□□□□□ -1.41
CCDC47-203ENST00000580986 A0A1B0GX51 115 aa6.26□□□□□ -1.41
CCDC47-203ENST00000580986 TSPAN13O95857 204 aa6.26□□□□□ -1.41
CCDC47-203ENST00000580986 Q1RN00 199 aa6.26□□□□□ -1.41
CCDC47-203ENST00000580986 LINC00575Q6W349 94 aa6.26□□□□□ -1.41
CCDC47-203ENST00000580986 H7C2G1 150 aa6.25□□□□□ -1.41
CCDC47-203ENST00000580986 TRIAP1O43715 76 aa6.25□□□□□ -1.41
CCDC47-203ENST00000580986 SLC25A20O43772 301 aa6.25□□□□□ -1.41
CCDC47-203ENST00000580986 COX6CP09669 75 aa6.25□□□□□ -1.41
CCDC47-203ENST00000580986 KRTAP1-4P0C5Y4 121 aa6.25□□□□□ -1.41
CCDC47-203ENST00000580986 SNCGO76070 127 aa6.24□□□□□ -1.41
CCDC47-203ENST00000580986 OXTP01178 125 aa6.24□□□□□ -1.41
CCDC47-203ENST00000580986 FAM229BQ4G0N7 80 aa6.24□□□□□ -1.41
CCDC47-203ENST00000580986 LINC00483Q53H64 154 aa6.24□□□□□ -1.41
CCDC47-203ENST00000580986 SPRR4Q96PI1 79 aa6.24□□□□□ -1.41
CCDC47-203ENST00000580986 hADV29S1A0JD25 119 aa6.23□□□□□ -1.41
CCDC47-203ENST00000580986 ERC2-IT1O76042 136 aa6.23□□□□□ -1.41
CCDC47-203ENST00000580986 LINC01600Q96MT4 127 aa6.23□□□□□ -1.41
CCDC47-203ENST00000580986 SNHG12Q9BXW3 62 aa6.23□□□□□ -1.41
CCDC47-203ENST00000580986 IGLV5-48A0A075B6I7 105 aa6.22□□□□□ -1.41
CCDC47-203ENST00000580986 SPRR1BP22528 89 aa6.22□□□□□ -1.41
CCDC47-203ENST00000580986 PSMB2P49721 201 aa6.22□□□□□ -1.41
CCDC47-203ENST00000580986 BATFQ16520 125 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms