RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 SPRR1BP22528 89 aa4.61□□□□□ -1.67
CASC3-206ENST00000579238 SLC25A34Q6PIV7 304 aa4.61□□□□□ -1.67
CASC3-206ENST00000579238 HRCT1Q6UXD1 115 aa4.61□□□□□ -1.67
CASC3-206ENST00000579238 COMMD7Q86VX2 200 aa4.61□□□□□ -1.67
CASC3-206ENST00000579238 M0R2T5 61 aa4.6□□□□□ -1.67
CASC3-206ENST00000579238 NMUP48645 174 aa4.6□□□□□ -1.67
CASC3-206ENST00000579238 HINT1P49773 126 aaPredicted RBP4.6□□□□□ -1.67
CASC3-206ENST00000579238 CBY1Q9Y3M2 126 aa4.6□□□□□ -1.67
CASC3-206ENST00000579238 H0Y8G0 127 aa4.59□□□□□ -1.67
CASC3-206ENST00000579238 J3QQQ9 107 aa4.59□□□□□ -1.67
CASC3-206ENST00000579238 HSBP1O75506 76 aa4.59□□□□□ -1.67
CASC3-206ENST00000579238 SOSTDC1Q6X4U4 206 aa4.59□□□□□ -1.67
CASC3-206ENST00000579238 LAMTOR3Q9UHA4 124 aa4.59□□□□□ -1.67
CASC3-206ENST00000579238 LGALS3P17931 250 aaKnown RBP4.58□□□□□ -1.68
CASC3-206ENST00000579238 PLNP26678 52 aa4.58□□□□□ -1.68
CASC3-206ENST00000579238 HERVK_113P61574 105 aa4.58□□□□□ -1.68
CASC3-206ENST00000579238 CD164Q04900 197 aa4.58□□□□□ -1.68
CASC3-206ENST00000579238 EIF4EBP3O60516 100 aaPredicted RBP4.57□□□□□ -1.68
CASC3-206ENST00000579238 COX6B2Q6YFQ2 88 aa4.57□□□□□ -1.68
CASC3-206ENST00000579238 DHRS4-AS1Q9P1J3 65 aa4.57□□□□□ -1.68
CASC3-206ENST00000579238 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
CASC3-206ENST00000579238 DPM2O94777 84 aa4.56□□□□□ -1.68
CASC3-206ENST00000579238 LEPROTL1O95214 131 aa4.56□□□□□ -1.68
CASC3-206ENST00000579238 NPC2P61916 151 aa4.56□□□□□ -1.68
CASC3-206ENST00000579238 RPL37P61927 97 aaKnown RBP4.56□□□□□ -1.68
CASC3-206ENST00000579238 Q5XG85 94 aa4.56□□□□□ -1.68
CASC3-206ENST00000579238 A0A0J9YXY3 114 aa4.55□□□□□ -1.68
CASC3-206ENST00000579238 H7C2G1 150 aa4.55□□□□□ -1.68
CASC3-206ENST00000579238 SNAPINO95295 136 aa4.55□□□□□ -1.68
CASC3-206ENST00000579238 ADAMTSL4-AS1Q5T5F5 129 aa4.55□□□□□ -1.68
CASC3-206ENST00000579238 YPEL4Q96NS1 127 aa4.55□□□□□ -1.68
CASC3-206ENST00000579238 PRO1933Q9H354 126 aa4.55□□□□□ -1.68
CASC3-206ENST00000579238 IGKCP01834 107 aa4.54□□□□□ -1.68
CASC3-206ENST00000579238 APOC3P02656 99 aa4.54□□□□□ -1.68
CASC3-206ENST00000579238 TAL2Q16559 108 aa4.54□□□□□ -1.68
CASC3-206ENST00000579238 C1orf195Q5TG92 126 aa4.54□□□□□ -1.68
CASC3-206ENST00000579238 SVBPQ8N300 66 aa4.54□□□□□ -1.68
CASC3-206ENST00000579238 OR13C6PQ8NH95 151 aa4.54□□□□□ -1.68
CASC3-206ENST00000579238 HSPB8Q9UJY1 196 aa4.54□□□□□ -1.68
CASC3-206ENST00000579238 TMA7Q9Y2S6 64 aaKnown RBP4.54□□□□□ -1.68
CASC3-206ENST00000579238 ELOF1P60002 83 aaKnown RBP4.53□□□□□ -1.68
CASC3-206ENST00000579238 NDUFA5Q16718 116 aa4.53□□□□□ -1.68
CASC3-206ENST00000579238 Q1RN00 199 aa4.53□□□□□ -1.68
CASC3-206ENST00000579238 PMCHL2Q9BQD1 86 aa4.53□□□□□ -1.68
CASC3-206ENST00000579238 SPANXDQ9BXN6 97 aa4.53□□□□□ -1.68
CASC3-206ENST00000579238 SPANXCQ9NY87 97 aa4.53□□□□□ -1.68
CASC3-206ENST00000579238 TEX49A0A1B0GTD5 131 aa4.52□□□□□ -1.69
CASC3-206ENST00000579238 E9PLD3 99 aa4.52□□□□□ -1.69
CASC3-206ENST00000579238 COX7BP24311 80 aa4.52□□□□□ -1.69
CASC3-206ENST00000579238 AKR1D1P51857 326 aa4.52□□□□□ -1.69
CASC3-206ENST00000579238 DEFB105AQ8NG35 78 aa4.52□□□□□ -1.69
CASC3-206ENST00000579238 LINC00308Q8TCZ7 52 aa4.52□□□□□ -1.69
CASC3-206ENST00000579238 SERF1AO75920 110 aa4.51□□□□□ -1.69
CASC3-206ENST00000579238 LINC00310P59036 64 aa4.51□□□□□ -1.69
CASC3-206ENST00000579238 C6orf99Q4VX62 202 aa4.51□□□□□ -1.69
CASC3-206ENST00000579238 LITAFQ99732 161 aa4.51□□□□□ -1.69
CASC3-206ENST00000579238 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
CASC3-206ENST00000579238 TIMM17BO60830 172 aa4.5□□□□□ -1.69
CASC3-206ENST00000579238 FABP4P15090 132 aa4.5□□□□□ -1.69
CASC3-206ENST00000579238 SMIM29Q86T20 159 aa4.5□□□□□ -1.69
CASC3-206ENST00000579238 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
CASC3-206ENST00000579238 TRGC2P03986 189 aa4.49□□□□□ -1.69
CASC3-206ENST00000579238 LINC00518Q8N0U6 118 aa4.49□□□□□ -1.69
CASC3-206ENST00000579238 IGLV5-48A0A075B6I7 105 aa4.48□□□□□ -1.69
CASC3-206ENST00000579238 A0A0G2JQZ4 141 aa4.48□□□□□ -1.69
CASC3-206ENST00000579238 TRBV7-6A0A0J9YX20 115 aa4.48□□□□□ -1.69
CASC3-206ENST00000579238 TCL1BO95988 128 aa4.48□□□□□ -1.69
CASC3-206ENST00000579238 A0A1B0GWB2 263 aa4.47□□□□□ -1.69
CASC3-206ENST00000579238 ZNF815PA8K554 130 aa4.45□□□□□ -1.7
CASC3-206ENST00000579238 CFC1P0CG37 223 aa4.45□□□□□ -1.7
CASC3-206ENST00000579238 Q6Q795 121 aa4.45□□□□□ -1.7
CASC3-206ENST00000579238 ATP11AUNQ6ZP68 121 aa4.44□□□□□ -1.7
CASC3-206ENST00000579238 Q75L30 129 aa4.44□□□□□ -1.7
CASC3-206ENST00000579238 A4D1N5 150 aa4.43□□□□□ -1.7
CASC3-206ENST00000579238 SYS1-DBNDD2H3BUS1 97 aa4.43□□□□□ -1.7
CASC3-206ENST00000579238 LINC01545Q5VT33 79 aa4.42□□□□□ -1.7
CASC3-206ENST00000579238 PCP2Q8IVA1 136 aa4.42□□□□□ -1.7
CASC3-206ENST00000579238 COPS9Q8WXC6 57 aa4.42□□□□□ -1.7
CASC3-206ENST00000579238 KRTAP9-8Q9BYQ0 159 aa4.42□□□□□ -1.7
CASC3-206ENST00000579238 TTTY13Q9BZ97 58 aa4.42□□□□□ -1.7
CASC3-206ENST00000579238 NHP2Q9NX24 153 aaKnown RBP4.42□□□□□ -1.7
CASC3-206ENST00000579238 A6NDN8 102 aa4.41□□□□□ -1.7
CASC3-206ENST00000579238 F8WEM9 126 aa4.41□□□□□ -1.7
CASC3-206ENST00000579238 OBSCN-AS1Q96MR7 158 aa4.41□□□□□ -1.7
CASC3-206ENST00000579238 IFITM1P13164 125 aa4.4□□□□□ -1.71
CASC3-206ENST00000579238 PET117Q6UWS5 81 aa4.4□□□□□ -1.71
CASC3-206ENST00000579238 TRBV7-7A0A0K0K1E9 115 aa4.39□□□□□ -1.71
CASC3-206ENST00000579238 C20orf202A1L168 122 aa4.39□□□□□ -1.71
CASC3-206ENST00000579238 Q6JHZ5 121 aa4.39□□□□□ -1.71
CASC3-206ENST00000579238 SCGB1D4Q6XE38 83 aa4.39□□□□□ -1.71
CASC3-206ENST00000579238 Q6ZVH6 145 aa4.39□□□□□ -1.71
CASC3-206ENST00000579238 TRAV13-2A0A0B4J235 113 aa4.38□□□□□ -1.71
CASC3-206ENST00000579238 SLC7A5P1Q8MH63 180 aa4.38□□□□□ -1.71
CASC3-206ENST00000579238 SMIM11BQ8TCY0 68 aa4.38□□□□□ -1.71
CASC3-206ENST00000579238 CLEC2BQ92478 149 aa4.38□□□□□ -1.71
CASC3-206ENST00000579238 COLCA2A8K830 154 aa4.37□□□□□ -1.71
CASC3-206ENST00000579238 IGFL1Q6UW32 110 aa4.37□□□□□ -1.71
CASC3-206ENST00000579238 MUSTN1Q8IVN3 82 aa4.37□□□□□ -1.71
CASC3-206ENST00000579238 SSPOA2VEC9 5147 aa4.36□□□□□ -1.71
CASC3-206ENST00000579238 TRBV20-1A0A075B6N2 111 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms