RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 PRO1933Q9H354 126 aa5.3□□□□□ -1.56
CDK5RAP3-211ENST00000578996 TRBV10-3A0A0K0K1G6 114 aa5.29□□□□□ -1.56
CDK5RAP3-211ENST00000578996 MYMXA0A1B0GTQ4 84 aa5.29□□□□□ -1.56
CDK5RAP3-211ENST00000578996 LINC00587B1AMM8 73 aa5.29□□□□□ -1.56
CDK5RAP3-211ENST00000578996 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
CDK5RAP3-211ENST00000578996 SPAG11AQ6PDA7 123 aa5.29□□□□□ -1.56
CDK5RAP3-211ENST00000578996 DAND5Q8N907 189 aa5.29□□□□□ -1.56
CDK5RAP3-211ENST00000578996 SMCR5Q8TEV8 140 aa5.29□□□□□ -1.56
CDK5RAP3-211ENST00000578996 COX8AP10176 69 aa5.28□□□□□ -1.56
CDK5RAP3-211ENST00000578996 SLC25A34Q6PIV7 304 aa5.28□□□□□ -1.56
CDK5RAP3-211ENST00000578996 LINC00337Q8N6G1 96 aa5.28□□□□□ -1.56
CDK5RAP3-211ENST00000578996 Q8NBF4 154 aa5.28□□□□□ -1.56
CDK5RAP3-211ENST00000578996 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
CDK5RAP3-211ENST00000578996 TSPEAR-AS2P59090 65 aa5.27□□□□□ -1.57
CDK5RAP3-211ENST00000578996 CTAG1AP78358 180 aa5.27□□□□□ -1.57
CDK5RAP3-211ENST00000578996 GAGE2AQ6NT46 116 aa5.27□□□□□ -1.57
CDK5RAP3-211ENST00000578996 KCNQ1DNQ9H478 68 aa5.27□□□□□ -1.57
CDK5RAP3-211ENST00000578996 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
CDK5RAP3-211ENST00000578996 LEPROTO15243 131 aa5.26□□□□□ -1.57
CDK5RAP3-211ENST00000578996 SPRR1AP35321 89 aa5.26□□□□□ -1.57
CDK5RAP3-211ENST00000578996 HERVK_113P61574 105 aa5.26□□□□□ -1.57
CDK5RAP3-211ENST00000578996 ANKRD39Q53RE8 183 aa5.26□□□□□ -1.57
CDK5RAP3-211ENST00000578996 C14orf144Q96I85 54 aa5.26□□□□□ -1.57
CDK5RAP3-211ENST00000578996 E9PLD3 99 aa5.25□□□□□ -1.57
CDK5RAP3-211ENST00000578996 J3QQQ9 107 aa5.25□□□□□ -1.57
CDK5RAP3-211ENST00000578996 LGALS3P17931 250 aaKnown RBP5.25□□□□□ -1.57
CDK5RAP3-211ENST00000578996 B5MCH6 92 aa5.24□□□□□ -1.57
CDK5RAP3-211ENST00000578996 KRTAP4-16G5E9R7 235 aaPredicted RBP5.24□□□□□ -1.57
CDK5RAP3-211ENST00000578996 NPC2P61916 151 aa5.24□□□□□ -1.57
CDK5RAP3-211ENST00000578996 MOBPQ13875 183 aa5.24□□□□□ -1.57
CDK5RAP3-211ENST00000578996 S100A7L2Q5SY68 101 aa5.24□□□□□ -1.57
CDK5RAP3-211ENST00000578996 HIGD1BQ9P298 99 aa5.24□□□□□ -1.57
CDK5RAP3-211ENST00000578996 M0R143 59 aa5.23□□□□□ -1.57
CDK5RAP3-211ENST00000578996 ERC2-IT1O76042 136 aa5.23□□□□□ -1.57
CDK5RAP3-211ENST00000578996 FP248Q71RG6 208 aaPredicted RBP5.23□□□□□ -1.57
CDK5RAP3-211ENST00000578996 SPANXB1Q9NS25 103 aaPredicted RBP5.23□□□□□ -1.57
CDK5RAP3-211ENST00000578996 TRBV10-2A0A0K0K1G8 114 aa5.22□□□□□ -1.57
CDK5RAP3-211ENST00000578996 SPINK1P00995 79 aa5.22□□□□□ -1.57
CDK5RAP3-211ENST00000578996 NMUP48645 174 aa5.22□□□□□ -1.57
CDK5RAP3-211ENST00000578996 LINC00483Q53H64 154 aa5.22□□□□□ -1.57
CDK5RAP3-211ENST00000578996 Q9BRP9 147 aa5.22□□□□□ -1.57
CDK5RAP3-211ENST00000578996 FAT4Q6V0I7 4981 aa5.22□□□□□ -1.57
CDK5RAP3-211ENST00000578996 TRAV23DV6A0A075B6W5 121 aa5.21□□□□□ -1.58
CDK5RAP3-211ENST00000578996 C9orf153Q5TBE3 101 aa5.21□□□□□ -1.58
CDK5RAP3-211ENST00000578996 Q6ZRX8 168 aa5.21□□□□□ -1.58
CDK5RAP3-211ENST00000578996 C2orf91Q6ZV80 131 aa5.21□□□□□ -1.58
CDK5RAP3-211ENST00000578996 SNHG12Q9BXW3 62 aa5.21□□□□□ -1.58
CDK5RAP3-211ENST00000578996 LOC107984156A0A0G2JMH3 177 aa5.2□□□□□ -1.58
CDK5RAP3-211ENST00000578996 NDUFC2O95298 119 aa5.2□□□□□ -1.58
CDK5RAP3-211ENST00000578996 TAL2Q16559 108 aa5.2□□□□□ -1.58
CDK5RAP3-211ENST00000578996 PCP2Q8IVA1 136 aa5.2□□□□□ -1.58
CDK5RAP3-211ENST00000578996 ARL17AQ8IVW1 177 aa5.2□□□□□ -1.58
CDK5RAP3-211ENST00000578996 A0A0J9YXY3 114 aa5.19□□□□□ -1.58
CDK5RAP3-211ENST00000578996 IGLV6-57P01721 117 aa5.19□□□□□ -1.58
CDK5RAP3-211ENST00000578996 HSD52Q0P140 79 aa5.19□□□□□ -1.58
CDK5RAP3-211ENST00000578996 KRTAP13-3Q3SY46 172 aa5.19□□□□□ -1.58
CDK5RAP3-211ENST00000578996 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
CDK5RAP3-211ENST00000578996 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
CDK5RAP3-211ENST00000578996 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
CDK5RAP3-211ENST00000578996 ZNF73O43830 326 aaPredicted RBP5.18□□□□□ -1.58
CDK5RAP3-211ENST00000578996 HINT1P49773 126 aaPredicted RBP5.18□□□□□ -1.58
CDK5RAP3-211ENST00000578996 COL5A1-AS1Q5SY13 56 aa5.18□□□□□ -1.58
CDK5RAP3-211ENST00000578996 ADAMTSL4-AS1Q5T5F5 129 aa5.18□□□□□ -1.58
CDK5RAP3-211ENST00000578996 SOSTDC1Q6X4U4 206 aa5.18□□□□□ -1.58
CDK5RAP3-211ENST00000578996 Q8N377 158 aa5.18□□□□□ -1.58
CDK5RAP3-211ENST00000578996 OR13C6PQ8NH95 151 aa5.18□□□□□ -1.58
CDK5RAP3-211ENST00000578996 EIF4EBP3O60516 100 aaPredicted RBP5.17□□□□□ -1.58
CDK5RAP3-211ENST00000578996 BVES-AS1Q5T3Y7 98 aa5.17□□□□□ -1.58
CDK5RAP3-211ENST00000578996 ST20-AS1Q8NBB2 130 aa5.17□□□□□ -1.58
CDK5RAP3-211ENST00000578996 ZNF815PA8K554 130 aa5.16□□□□□ -1.58
CDK5RAP3-211ENST00000578996 SLC25A20O43772 301 aa5.16□□□□□ -1.58
CDK5RAP3-211ENST00000578996 RPS29P62273 56 aaKnown RBP5.16□□□□□ -1.58
CDK5RAP3-211ENST00000578996 TIMM17BO60830 172 aa5.15□□□□□ -1.59
CDK5RAP3-211ENST00000578996 SEC61BP60468 96 aaKnown RBP5.15□□□□□ -1.59
CDK5RAP3-211ENST00000578996 ASB16-AS1Q495Z4 193 aa5.15□□□□□ -1.59
CDK5RAP3-211ENST00000578996 TTTY13Q9BZ97 58 aa5.15□□□□□ -1.59
CDK5RAP3-211ENST00000578996 CBY1Q9Y3M2 126 aa5.15□□□□□ -1.59
CDK5RAP3-211ENST00000578996 HRCT1Q6UXD1 115 aa5.14□□□□□ -1.59
CDK5RAP3-211ENST00000578996 Q6ZVH6 145 aa5.14□□□□□ -1.59
CDK5RAP3-211ENST00000578996 LINC00308Q8TCZ7 52 aa5.14□□□□□ -1.59
CDK5RAP3-211ENST00000578996 SPANXCQ9NY87 97 aa5.14□□□□□ -1.59
CDK5RAP3-211ENST00000578996 A6NDN8 102 aa5.13□□□□□ -1.59
CDK5RAP3-211ENST00000578996 SCGB1D4Q6XE38 83 aa5.13□□□□□ -1.59
CDK5RAP3-211ENST00000578996 CEND1Q8N111 149 aa5.13□□□□□ -1.59
CDK5RAP3-211ENST00000578996 A0A1B0GWB2 263 aa5.12□□□□□ -1.59
CDK5RAP3-211ENST00000578996 HIST1H4GQ99525 98 aa5.12□□□□□ -1.59
CDK5RAP3-211ENST00000578996 LITAFQ99732 161 aa5.12□□□□□ -1.59
CDK5RAP3-211ENST00000578996 TMEM238LA0A1B0GVL6 79 aa5.11□□□□□ -1.59
CDK5RAP3-211ENST00000578996 A6NJY4 79 aa5.11□□□□□ -1.59
CDK5RAP3-211ENST00000578996 LINC01547P58512 204 aaPredicted RBP5.11□□□□□ -1.59
CDK5RAP3-211ENST00000578996 BATFQ16520 125 aa5.11□□□□□ -1.59
CDK5RAP3-211ENST00000578996 DEFB105AQ8NG35 78 aa5.11□□□□□ -1.59
CDK5RAP3-211ENST00000578996 SPANXDQ9BXN6 97 aa5.11□□□□□ -1.59
CDK5RAP3-211ENST00000578996 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
CDK5RAP3-211ENST00000578996 DHRS4-AS1Q9P1J3 65 aa5.11□□□□□ -1.59
CDK5RAP3-211ENST00000578996 IFITM1P13164 125 aa5.1□□□□□ -1.59
CDK5RAP3-211ENST00000578996 COX7BP24311 80 aa5.1□□□□□ -1.59
CDK5RAP3-211ENST00000578996 C6orf99Q4VX62 202 aa5.1□□□□□ -1.59
CDK5RAP3-211ENST00000578996 XP32Q5T750 250 aa5.1□□□□□ -1.59
CDK5RAP3-211ENST00000578996 LIMD2Q9BT23 127 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms