RNA–Protein interactions for RNA: ENST00000578993.5

LIMD2-206, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-206ENST00000578993 LITAFQ99732 161 aa11.53□□□□□ -0.56
LIMD2-206ENST00000578993 S100A7L2Q5SY68 101 aa11.52□□□□□ -0.57
LIMD2-206ENST00000578993 LINC01545Q5VT33 79 aa11.52□□□□□ -0.57
LIMD2-206ENST00000578993 CDIP1Q9H305 208 aa11.52□□□□□ -0.57
LIMD2-206ENST00000578993 FAT4Q6V0I7 4981 aa11.51□□□□□ -0.57
LIMD2-206ENST00000578993 TRAV23DV6A0A075B6W5 121 aa11.5□□□□□ -0.57
LIMD2-206ENST00000578993 C4orf48Q5BLP8 95 aa11.5□□□□□ -0.57
LIMD2-206ENST00000578993 IGLV9-49A0A0B4J1Y8 123 aa11.48□□□□□ -0.57
LIMD2-206ENST00000578993 ZNF73O43830 326 aaPredicted RBP11.48□□□□□ -0.57
LIMD2-206ENST00000578993 MOBPQ13875 183 aa11.48□□□□□ -0.57
LIMD2-206ENST00000578993 TTTY13Q9BZ97 58 aa11.48□□□□□ -0.57
LIMD2-206ENST00000578993 PET117Q6UWS5 81 aa11.47□□□□□ -0.57
LIMD2-206ENST00000578993 FP248Q71RG6 208 aaPredicted RBP11.47□□□□□ -0.57
LIMD2-206ENST00000578993 LINC00308Q8TCZ7 52 aa11.47□□□□□ -0.57
LIMD2-206ENST00000578993 SPINK1P00995 79 aa11.46□□□□□ -0.57
LIMD2-206ENST00000578993 C3orf79P0CE67 100 aa11.46□□□□□ -0.57
LIMD2-206ENST00000578993 TIMM17BO60830 172 aa11.44□□□□□ -0.58
LIMD2-206ENST00000578993 KRTAP13-3Q3SY46 172 aa11.44□□□□□ -0.58
LIMD2-206ENST00000578993 ST20-AS1Q8NBB2 130 aa11.44□□□□□ -0.58
LIMD2-206ENST00000578993 SSBP3-AS1Q7Z2R9 100 aa11.43□□□□□ -0.58
LIMD2-206ENST00000578993 SPANXCQ9NY87 97 aa11.43□□□□□ -0.58
LIMD2-206ENST00000578993 A0A0U1RQV1 116 aa11.42□□□□□ -0.58
LIMD2-206ENST00000578993 ZNF815PA8K554 130 aa11.42□□□□□ -0.58
LIMD2-206ENST00000578993 JOSD1Q15040 202 aaPredicted RBP11.42□□□□□ -0.58
LIMD2-206ENST00000578993 COA6Q5JTJ3 125 aaKnown RBP11.42□□□□□ -0.58
LIMD2-206ENST00000578993 Q8N377 158 aa11.41□□□□□ -0.58
LIMD2-206ENST00000578993 RPS29P62273 56 aaKnown RBP11.39□□□□□ -0.59
LIMD2-206ENST00000578993 LCE2AQ5TA79 106 aaPredicted RBP11.39□□□□□ -0.59
LIMD2-206ENST00000578993 KRTDAPP60985 99 aa11.37□□□□□ -0.59
LIMD2-206ENST00000578993 OR13C6PQ8NH95 151 aa11.37□□□□□ -0.59
LIMD2-206ENST00000578993 SPANXDQ9BXN6 97 aa11.35□□□□□ -0.59
LIMD2-206ENST00000578993 C5orf52A6NGY3 159 aa11.34□□□□□ -0.59
LIMD2-206ENST00000578993 ANKRD39Q53RE8 183 aa11.34□□□□□ -0.59
LIMD2-206ENST00000578993 C9orf153Q5TBE3 101 aa11.34□□□□□ -0.59
LIMD2-206ENST00000578993 CBY1Q9Y3M2 126 aa11.34□□□□□ -0.59
LIMD2-206ENST00000578993 SPRR1BP22528 89 aa11.33□□□□□ -0.6
LIMD2-206ENST00000578993 HINT1P49773 126 aaPredicted RBP11.33□□□□□ -0.6
LIMD2-206ENST00000578993 SLC25A20O43772 301 aa11.31□□□□□ -0.6
LIMD2-206ENST00000578993 ELOF1P60002 83 aaKnown RBP11.31□□□□□ -0.6
LIMD2-206ENST00000578993 ATOH7Q8N100 152 aa11.31□□□□□ -0.6
LIMD2-206ENST00000578993 ASB16-AS1Q495Z4 193 aa11.3□□□□□ -0.6
LIMD2-206ENST00000578993 C6orf99Q4VX62 202 aa11.3□□□□□ -0.6
LIMD2-206ENST00000578993 DHRS4-AS1Q9P1J3 65 aa11.3□□□□□ -0.6
LIMD2-206ENST00000578993 LINC00518Q8N0U6 118 aa11.29□□□□□ -0.6
LIMD2-206ENST00000578993 SCGB1D4Q6XE38 83 aa11.28□□□□□ -0.6
LIMD2-206ENST00000578993 KRTAP4-1Q9BYQ7 146 aa11.28□□□□□ -0.6
LIMD2-206ENST00000578993 COX7BP24311 80 aa11.27□□□□□ -0.61
LIMD2-206ENST00000578993 PCP2Q8IVA1 136 aa11.27□□□□□ -0.61
LIMD2-206ENST00000578993 C20orf202A1L168 122 aa11.25□□□□□ -0.61
LIMD2-206ENST00000578993 MUSTN1Q8IVN3 82 aa11.23□□□□□ -0.61
LIMD2-206ENST00000578993 IFITM1P13164 125 aa11.22□□□□□ -0.61
LIMD2-206ENST00000578993 HRCT1Q6UXD1 115 aa11.22□□□□□ -0.61
LIMD2-206ENST00000578993 TRBV7-6A0A0J9YX20 115 aa11.21□□□□□ -0.61
LIMD2-206ENST00000578993 SLC25A34Q6PIV7 304 aa11.21□□□□□ -0.61
LIMD2-206ENST00000578993 LAMTOR3Q9UHA4 124 aa11.21□□□□□ -0.61
LIMD2-206ENST00000578993 Q1RN00 199 aa11.2□□□□□ -0.62
LIMD2-206ENST00000578993 XP32Q5T750 250 aa11.2□□□□□ -0.62
LIMD2-206ENST00000578993 DEFB105AQ8NG35 78 aa11.2□□□□□ -0.62
LIMD2-206ENST00000578993 LINC01547P58512 204 aaPredicted RBP11.19□□□□□ -0.62
LIMD2-206ENST00000578993 Q6ZVH6 145 aa11.19□□□□□ -0.62
LIMD2-206ENST00000578993 SMIM29Q86T20 159 aa11.19□□□□□ -0.62
LIMD2-206ENST00000578993 A6NDN8 102 aa11.18□□□□□ -0.62
LIMD2-206ENST00000578993 SEC61BP60468 96 aaKnown RBP11.18□□□□□ -0.62
LIMD2-206ENST00000578993 TAL2Q16559 108 aa11.18□□□□□ -0.62
LIMD2-206ENST00000578993 COPS9Q8WXC6 57 aa11.18□□□□□ -0.62
LIMD2-206ENST00000578993 TEX49A0A1B0GTD5 131 aa11.17□□□□□ -0.62
LIMD2-206ENST00000578993 A0A1B0GWB2 263 aa11.17□□□□□ -0.62
LIMD2-206ENST00000578993 KRTAP9-2Q9BYQ4 174 aa11.17□□□□□ -0.62
LIMD2-206ENST00000578993 HIST3H2BBQ8N257 126 aa11.16□□□□□ -0.62
LIMD2-206ENST00000578993 IGLV5-48A0A075B6I7 105 aa11.14□□□□□ -0.63
LIMD2-206ENST00000578993 AKR1D1P51857 326 aa11.14□□□□□ -0.63
LIMD2-206ENST00000578993 HIST1H2BLQ99880 126 aa11.14□□□□□ -0.63
LIMD2-206ENST00000578993 LIMD2Q9BT23 127 aa11.14□□□□□ -0.63
LIMD2-206ENST00000578993 SMIM11BQ8TCY0 68 aa11.13□□□□□ -0.63
LIMD2-206ENST00000578993 A0A0G2JQZ4 141 aa11.12□□□□□ -0.63
LIMD2-206ENST00000578993 SNRPEP62304 92 aaKnown RBP11.12□□□□□ -0.63
LIMD2-206ENST00000578993 CD164Q04900 197 aa11.12□□□□□ -0.63
LIMD2-206ENST00000578993 PRO1933Q9H354 126 aa11.11□□□□□ -0.63
LIMD2-206ENST00000578993 TRAV13-2A0A0B4J235 113 aa11.1□□□□□ -0.63
LIMD2-206ENST00000578993 H7C2G1 150 aa11.09□□□□□ -0.63
LIMD2-206ENST00000578993 A4D1N5 150 aa11.07□□□□□ -0.64
LIMD2-206ENST00000578993 C9orf92A6NGG3 77 aa11.06□□□□□ -0.64
LIMD2-206ENST00000578993 S100A2P29034 98 aa11.05□□□□□ -0.64
LIMD2-206ENST00000578993 Q5XG85 94 aa11.05□□□□□ -0.64
LIMD2-206ENST00000578993 C1orf195Q5TG92 126 aa11.02□□□□□ -0.65
LIMD2-206ENST00000578993 NHP2Q9NX24 153 aaKnown RBP11.02□□□□□ -0.65
LIMD2-206ENST00000578993 LINC00575Q6W349 94 aa11.01□□□□□ -0.65
LIMD2-206ENST00000578993 HSBP1L1C9JCN9 74 aa11□□□□□ -0.65
LIMD2-206ENST00000578993 PCOTHQ58A44 107 aa11□□□□□ -0.65
LIMD2-206ENST00000578993 LCE2CQ5TA81 110 aa11□□□□□ -0.65
LIMD2-206ENST00000578993 KRTAP19-2Q3LHN2 52 aa10.99□□□□□ -0.65
LIMD2-206ENST00000578993 S100A1P23297 94 aa10.98□□□□□ -0.65
LIMD2-206ENST00000578993 S100A6P06703 90 aa10.96□□□□□ -0.65
LIMD2-206ENST00000578993 VAMP3Q15836 100 aa10.96□□□□□ -0.65
LIMD2-206ENST00000578993 Q6ZQY7 126 aa10.95□□□□□ -0.66
LIMD2-206ENST00000578993 hADV29S1A0JD25 119 aa10.94□□□□□ -0.66
LIMD2-206ENST00000578993 C12orf57Q99622 126 aa10.94□□□□□ -0.66
LIMD2-206ENST00000578993 IGLV8-61A0A075B6I0 122 aa10.92□□□□□ -0.66
LIMD2-206ENST00000578993 SCGB1D1O95968 90 aa10.92□□□□□ -0.66
LIMD2-206ENST00000578993 COX8AP10176 69 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms