RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 TPRXLQ17RH7 258 aa5.33□□□□□ -1.56
PTPRM-210ENST00000578916 C6orf99Q4VX62 202 aa5.33□□□□□ -1.56
PTPRM-210ENST00000578916 HIST1H4GQ99525 98 aa5.33□□□□□ -1.56
PTPRM-210ENST00000578916 IGLV7-46A0A075B6I9 117 aa5.32□□□□□ -1.56
PTPRM-210ENST00000578916 KANTRA0A1W2PQU2 76 aa5.32□□□□□ -1.56
PTPRM-210ENST00000578916 NDUFC2-KCTD14E9PQ53 114 aa5.32□□□□□ -1.56
PTPRM-210ENST00000578916 H3BRM9 83 aa5.32□□□□□ -1.56
PTPRM-210ENST00000578916 ZNF345Q14585 488 aa5.32□□□□□ -1.56
PTPRM-210ENST00000578916 A8MWL6 223 aa5.31□□□□□ -1.56
PTPRM-210ENST00000578916 LST1O00453 97 aa5.31□□□□□ -1.56
PTPRM-210ENST00000578916 RPL28P46779 137 aaKnown RBP5.31□□□□□ -1.56
PTPRM-210ENST00000578916 C9orf129Q5T035 196 aaKnown RBP5.31□□□□□ -1.56
PTPRM-210ENST00000578916 LINC00337Q8N6G1 96 aa5.31□□□□□ -1.56
PTPRM-210ENST00000578916 TOMM6Q96B49 74 aa5.31□□□□□ -1.56
PTPRM-210ENST00000578916 TIMM21Q9BVV7 248 aa5.31□□□□□ -1.56
PTPRM-210ENST00000578916 TRBV30A0A0K0K1B3 111 aa5.3□□□□□ -1.56
PTPRM-210ENST00000578916 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
PTPRM-210ENST00000578916 ZNF73O43830 326 aaPredicted RBP5.3□□□□□ -1.56
PTPRM-210ENST00000578916 LINC01545Q5VT33 79 aa5.3□□□□□ -1.56
PTPRM-210ENST00000578916 LINC00173Q6ZV60 143 aa5.3□□□□□ -1.56
PTPRM-210ENST00000578916 FAM218AQ96MZ4 157 aa5.3□□□□□ -1.56
PTPRM-210ENST00000578916 C22orf24Q9Y442 160 aa5.3□□□□□ -1.56
PTPRM-210ENST00000578916 SPCS1Q9Y6A9 102 aa5.3□□□□□ -1.56
PTPRM-210ENST00000578916 SERP1Q9Y6X1 66 aa5.3□□□□□ -1.56
PTPRM-210ENST00000578916 A8MUN3 132 aa5.29□□□□□ -1.56
PTPRM-210ENST00000578916 PPP1R17O96001 155 aa5.29□□□□□ -1.56
PTPRM-210ENST00000578916 SPATA45Q537H7 98 aa5.29□□□□□ -1.56
PTPRM-210ENST00000578916 LCA10Q71F78 164 aa5.29□□□□□ -1.56
PTPRM-210ENST00000578916 AMN1Q8IY45 258 aa5.29□□□□□ -1.56
PTPRM-210ENST00000578916 LINC00304Q8N9R0 145 aa5.29□□□□□ -1.56
PTPRM-210ENST00000578916 ANAPC11Q9NYG5 84 aa5.29□□□□□ -1.56
PTPRM-210ENST00000578916 A0A1B0GUT8 65 aa5.28□□□□□ -1.56
PTPRM-210ENST00000578916 C9JQL5 133 aa5.28□□□□□ -1.56
PTPRM-210ENST00000578916 HBBP68871 147 aa5.28□□□□□ -1.56
PTPRM-210ENST00000578916 KIAA0087Q14695 138 aa5.28□□□□□ -1.56
PTPRM-210ENST00000578916 C2orf82Q6UX34 121 aa5.28□□□□□ -1.56
PTPRM-210ENST00000578916 IGHV6-1A0A0B4J1U7 121 aa5.27□□□□□ -1.57
PTPRM-210ENST00000578916 H3BT86 120 aa5.27□□□□□ -1.57
PTPRM-210ENST00000578916 BCE1O60756 84 aa5.27□□□□□ -1.57
PTPRM-210ENST00000578916 SCGB1C2P0DMR2 95 aa5.27□□□□□ -1.57
PTPRM-210ENST00000578916 RPL39P62891 51 aaKnown RBP5.27□□□□□ -1.57
PTPRM-210ENST00000578916 KRTAP13-2Q52LG2 175 aa5.27□□□□□ -1.57
PTPRM-210ENST00000578916 BVES-AS1Q5T3Y7 98 aa5.27□□□□□ -1.57
PTPRM-210ENST00000578916 TEN1Q86WV5 123 aa5.27□□□□□ -1.57
PTPRM-210ENST00000578916 NRACQ8N912 160 aa5.27□□□□□ -1.57
PTPRM-210ENST00000578916 HIGD1CA8MV81 97 aa5.26□□□□□ -1.57
PTPRM-210ENST00000578916 M0R378 163 aa5.26□□□□□ -1.57
PTPRM-210ENST00000578916 MRPS36P82909 103 aaKnown RBP5.26□□□□□ -1.57
PTPRM-210ENST00000578916 FAM104AQ969W3 186 aa5.26□□□□□ -1.57
PTPRM-210ENST00000578916 IGKV2D-26A0A0A0MRZ7 120 aa5.25□□□□□ -1.57
PTPRM-210ENST00000578916 A0A1W2PPM0 123 aa5.25□□□□□ -1.57
PTPRM-210ENST00000578916 LINC00313P59037 77 aa5.25□□□□□ -1.57
PTPRM-210ENST00000578916 NPC2P61916 151 aa5.25□□□□□ -1.57
PTPRM-210ENST00000578916 PMCHL1Q16048 86 aa5.25□□□□□ -1.57
PTPRM-210ENST00000578916 FAM229BQ4G0N7 80 aa5.25□□□□□ -1.57
PTPRM-210ENST00000578916 LCE2CQ5TA81 110 aa5.25□□□□□ -1.57
PTPRM-210ENST00000578916 URB1-AS1Q96HZ7 61 aa5.25□□□□□ -1.57
PTPRM-210ENST00000578916 TIMM17AQ99595 171 aa5.25□□□□□ -1.57
PTPRM-210ENST00000578916 XAGE1AQ9HD64 81 aa5.25□□□□□ -1.57
PTPRM-210ENST00000578916 TMEM256-PLSCR3K7ERE1 68 aa5.24□□□□□ -1.57
PTPRM-210ENST00000578916 PRSS2P07478 247 aa5.24□□□□□ -1.57
PTPRM-210ENST00000578916 COX7CP15954 63 aa5.24□□□□□ -1.57
PTPRM-210ENST00000578916 PMCHL2Q9BQD1 86 aa5.24□□□□□ -1.57
PTPRM-210ENST00000578916 C20orf78Q9BR46 151 aa5.24□□□□□ -1.57
PTPRM-210ENST00000578916 TP73-AS1Q9UF72 201 aa5.24□□□□□ -1.57
PTPRM-210ENST00000578916 UBE2AP49459 152 aa5.23□□□□□ -1.57
PTPRM-210ENST00000578916 PPDPFLQ8WWR9 84 aa5.23□□□□□ -1.57
PTPRM-210ENST00000578916 PRELID3AQ96N28 172 aa5.23□□□□□ -1.57
PTPRM-210ENST00000578916 RPL37AP8A6NKH3 93 aa5.22□□□□□ -1.57
PTPRM-210ENST00000578916 ASB16-AS1Q495Z4 193 aa5.22□□□□□ -1.57
PTPRM-210ENST00000578916 MRPL51Q4U2R6 128 aaKnown RBP5.22□□□□□ -1.57
PTPRM-210ENST00000578916 PCP2Q8IVA1 136 aa5.22□□□□□ -1.57
PTPRM-210ENST00000578916 LINC00167Q96N53 147 aa5.22□□□□□ -1.57
PTPRM-210ENST00000578916 TOMM7Q9P0U1 55 aa5.22□□□□□ -1.57
PTPRM-210ENST00000578916 ZNF706Q9Y5V0 76 aaPredicted RBP5.22□□□□□ -1.57
PTPRM-210ENST00000578916 TRBV24-1A0A075B6N3 115 aa5.21□□□□□ -1.58
PTPRM-210ENST00000578916 SRP19P09132 144 aaKnown RBP5.21□□□□□ -1.58
PTPRM-210ENST00000578916 CKS2P33552 79 aa5.21□□□□□ -1.58
PTPRM-210ENST00000578916 IFI27P40305 119 aaPredicted RBP5.21□□□□□ -1.58
PTPRM-210ENST00000578916 FAM104BQ5XKR9 115 aa5.21□□□□□ -1.58
PTPRM-210ENST00000578916 IGLV5-45A0A087WSX0 123 aa5.2□□□□□ -1.58
PTPRM-210ENST00000578916 RPL23P62829 140 aaKnown RBP5.2□□□□□ -1.58
PTPRM-210ENST00000578916 ORMDL2Q53FV1 153 aa5.2□□□□□ -1.58
PTPRM-210ENST00000578916 FP248Q71RG6 208 aaPredicted RBP5.2□□□□□ -1.58
PTPRM-210ENST00000578916 NKAPP1Q8N9T2 125 aa5.2□□□□□ -1.58
PTPRM-210ENST00000578916 SMIM2Q9BVW6 85 aa5.2□□□□□ -1.58
PTPRM-210ENST00000578916 OSTCQ9NRP0 149 aa5.2□□□□□ -1.58
PTPRM-210ENST00000578916 IGLV4-3A0A075B6K6 122 aa5.19□□□□□ -1.58
PTPRM-210ENST00000578916 SPAG11AQ6PDA7 123 aa5.19□□□□□ -1.58
PTPRM-210ENST00000578916 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
PTPRM-210ENST00000578916 DSCR8Q96T75 97 aa5.19□□□□□ -1.58
PTPRM-210ENST00000578916 KRTAP4-1Q9BYQ7 146 aa5.19□□□□□ -1.58
PTPRM-210ENST00000578916 H3BUT2 72 aa5.18□□□□□ -1.58
PTPRM-210ENST00000578916 CXCL6P80162 114 aa5.18□□□□□ -1.58
PTPRM-210ENST00000578916 KRTAP13-3Q3SY46 172 aa5.18□□□□□ -1.58
PTPRM-210ENST00000578916 Q8IZM0 81 aa5.18□□□□□ -1.58
PTPRM-210ENST00000578916 C18orf32Q8TCD1 76 aa5.18□□□□□ -1.58
PTPRM-210ENST00000578916 TMEM141Q96I45 108 aa5.18□□□□□ -1.58
PTPRM-210ENST00000578916 SMIM7Q9BQ49 75 aa5.18□□□□□ -1.58
PTPRM-210ENST00000578916 TRBV7-7A0A0K0K1E9 115 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms