RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 ERC2-IT1O76042 136 aa12.95□□□□□ -0.34
CDKN2A-212ENST00000578845 SPINK1P00995 79 aa12.95□□□□□ -0.34
CDKN2A-212ENST00000578845 GAGE2AQ6NT46 116 aa12.94□□□□□ -0.34
CDKN2A-212ENST00000578845 E9PLD3 99 aa12.92□□□□□ -0.34
CDKN2A-212ENST00000578845 LCE2AQ5TA79 106 aaPredicted RBP12.92□□□□□ -0.34
CDKN2A-212ENST00000578845 A0A0J9YXY3 114 aa12.91□□□□□ -0.34
CDKN2A-212ENST00000578845 RPS29P62273 56 aaKnown RBP12.91□□□□□ -0.34
CDKN2A-212ENST00000578845 SOSTDC1Q6X4U4 206 aa12.91□□□□□ -0.34
CDKN2A-212ENST00000578845 S100A2P29034 98 aa12.9□□□□□ -0.34
CDKN2A-212ENST00000578845 S100A7L2Q5SY68 101 aa12.9□□□□□ -0.34
CDKN2A-212ENST00000578845 SSBP3-AS1Q7Z2R9 100 aa12.9□□□□□ -0.34
CDKN2A-212ENST00000578845 TRAV23DV6A0A075B6W5 121 aa12.89□□□□□ -0.35
CDKN2A-212ENST00000578845 EIF4EBP3O60516 100 aaPredicted RBP12.89□□□□□ -0.35
CDKN2A-212ENST00000578845 KRTAP13-3Q3SY46 172 aa12.89□□□□□ -0.35
CDKN2A-212ENST00000578845 ADAMTSL4-AS1Q5T5F5 129 aa12.89□□□□□ -0.35
CDKN2A-212ENST00000578845 MOBPQ13875 183 aa12.88□□□□□ -0.35
CDKN2A-212ENST00000578845 JOSD1Q15040 202 aaPredicted RBP12.87□□□□□ -0.35
CDKN2A-212ENST00000578845 IGLV9-49A0A0B4J1Y8 123 aa12.86□□□□□ -0.35
CDKN2A-212ENST00000578845 SYS1-DBNDD2H3BUS1 97 aa12.85□□□□□ -0.35
CDKN2A-212ENST00000578845 ZNF73O43830 326 aaPredicted RBP12.85□□□□□ -0.35
CDKN2A-212ENST00000578845 AKR1D1P51857 326 aa12.84□□□□□ -0.35
CDKN2A-212ENST00000578845 NPC2P61916 151 aa12.84□□□□□ -0.35
CDKN2A-212ENST00000578845 LITAFQ99732 161 aa12.84□□□□□ -0.35
CDKN2A-212ENST00000578845 Q8N377 158 aa12.83□□□□□ -0.36
CDKN2A-212ENST00000578845 C5orf52A6NGY3 159 aa12.82□□□□□ -0.36
CDKN2A-212ENST00000578845 PET117Q6UWS5 81 aa12.82□□□□□ -0.36
CDKN2A-212ENST00000578845 CBY1Q9Y3M2 126 aa12.82□□□□□ -0.36
CDKN2A-212ENST00000578845 C20orf202A1L168 122 aa12.81□□□□□ -0.36
CDKN2A-212ENST00000578845 TIMM17BO60830 172 aa12.81□□□□□ -0.36
CDKN2A-212ENST00000578845 LINC01545Q5VT33 79 aa12.81□□□□□ -0.36
CDKN2A-212ENST00000578845 SPANXCQ9NY87 97 aa12.81□□□□□ -0.36
CDKN2A-212ENST00000578845 HIST3H2BBQ8N257 126 aa12.8□□□□□ -0.36
CDKN2A-212ENST00000578845 LINC00308Q8TCZ7 52 aa12.8□□□□□ -0.36
CDKN2A-212ENST00000578845 KRTDAPP60985 99 aa12.78□□□□□ -0.36
CDKN2A-212ENST00000578845 SNRPEP62304 92 aaKnown RBP12.78□□□□□ -0.36
CDKN2A-212ENST00000578845 ASB16-AS1Q495Z4 193 aa12.78□□□□□ -0.36
CDKN2A-212ENST00000578845 SLC25A20O43772 301 aa12.77□□□□□ -0.37
CDKN2A-212ENST00000578845 C3orf79P0CE67 100 aa12.76□□□□□ -0.37
CDKN2A-212ENST00000578845 HINT1P49773 126 aaPredicted RBP12.76□□□□□ -0.37
CDKN2A-212ENST00000578845 ST20-AS1Q8NBB2 130 aa12.76□□□□□ -0.37
CDKN2A-212ENST00000578845 HIST1H2BLQ99880 126 aa12.76□□□□□ -0.37
CDKN2A-212ENST00000578845 C9orf153Q5TBE3 101 aa12.74□□□□□ -0.37
CDKN2A-212ENST00000578845 SPRR1BP22528 89 aa12.73□□□□□ -0.37
CDKN2A-212ENST00000578845 SPANXDQ9BXN6 97 aa12.73□□□□□ -0.37
CDKN2A-212ENST00000578845 ZNF815PA8K554 130 aa12.72□□□□□ -0.37
CDKN2A-212ENST00000578845 OR13C6PQ8NH95 151 aa12.71□□□□□ -0.37
CDKN2A-212ENST00000578845 KRTAP9-2Q9BYQ4 174 aa12.71□□□□□ -0.37
CDKN2A-212ENST00000578845 DHRS4-AS1Q9P1J3 65 aa12.71□□□□□ -0.37
CDKN2A-212ENST00000578845 TTTY13Q9BZ97 58 aa12.69□□□□□ -0.38
CDKN2A-212ENST00000578845 SEC61BP60468 96 aaKnown RBP12.68□□□□□ -0.38
CDKN2A-212ENST00000578845 ELOF1P60002 83 aaKnown RBP12.67□□□□□ -0.38
CDKN2A-212ENST00000578845 LINC00518Q8N0U6 118 aa12.67□□□□□ -0.38
CDKN2A-212ENST00000578845 TMA7Q9Y2S6 64 aaKnown RBP12.67□□□□□ -0.38
CDKN2A-212ENST00000578845 SLC25A34Q6PIV7 304 aa12.66□□□□□ -0.38
CDKN2A-212ENST00000578845 XP32Q5T750 250 aa12.65□□□□□ -0.38
CDKN2A-212ENST00000578845 KRTAP4-1Q9BYQ7 146 aa12.64□□□□□ -0.39
CDKN2A-212ENST00000578845 COX7BP24311 80 aa12.62□□□□□ -0.39
CDKN2A-212ENST00000578845 C6orf99Q4VX62 202 aa12.62□□□□□ -0.39
CDKN2A-212ENST00000578845 HSBP1L1C9JCN9 74 aa12.61□□□□□ -0.39
CDKN2A-212ENST00000578845 TRBV7-6A0A0J9YX20 115 aa12.6□□□□□ -0.39
CDKN2A-212ENST00000578845 SCGB1D1O95968 90 aa12.6□□□□□ -0.39
CDKN2A-212ENST00000578845 LIMD2Q9BT23 127 aa12.6□□□□□ -0.39
CDKN2A-212ENST00000578845 LAMTOR3Q9UHA4 124 aa12.6□□□□□ -0.39
CDKN2A-212ENST00000578845 SCGB1D4Q6XE38 83 aa12.58□□□□□ -0.4
CDKN2A-212ENST00000578845 IFITM1P13164 125 aa12.57□□□□□ -0.4
CDKN2A-212ENST00000578845 ANKRD39Q53RE8 183 aa12.57□□□□□ -0.4
CDKN2A-212ENST00000578845 COPS9Q8WXC6 57 aa12.57□□□□□ -0.4
CDKN2A-212ENST00000578845 Q6ZVH6 145 aa12.56□□□□□ -0.4
CDKN2A-212ENST00000578845 CD164Q04900 197 aa12.54□□□□□ -0.4
CDKN2A-212ENST00000578845 TEX49A0A1B0GTD5 131 aa12.53□□□□□ -0.4
CDKN2A-212ENST00000578845 A0A1B0GWB2 263 aa12.53□□□□□ -0.4
CDKN2A-212ENST00000578845 ATOH7Q8N100 152 aa12.53□□□□□ -0.4
CDKN2A-212ENST00000578845 TAL2Q16559 108 aa12.52□□□□□ -0.41
CDKN2A-212ENST00000578845 HRCT1Q6UXD1 115 aa12.52□□□□□ -0.41
CDKN2A-212ENST00000578845 IGLV5-48A0A075B6I7 105 aa12.5□□□□□ -0.41
CDKN2A-212ENST00000578845 LINC01547P58512 204 aaPredicted RBP12.5□□□□□ -0.41
CDKN2A-212ENST00000578845 Q1RN00 199 aa12.5□□□□□ -0.41
CDKN2A-212ENST00000578845 KRTAP3-3Q9BYR6 98 aa12.5□□□□□ -0.41
CDKN2A-212ENST00000578845 KRTAP3-2Q9BYR7 98 aa12.5□□□□□ -0.41
CDKN2A-212ENST00000578845 PRO1933Q9H354 126 aa12.5□□□□□ -0.41
CDKN2A-212ENST00000578845 SMIM29Q86T20 159 aa12.49□□□□□ -0.41
CDKN2A-212ENST00000578845 PCP2Q8IVA1 136 aa12.49□□□□□ -0.41
CDKN2A-212ENST00000578845 DEFB105AQ8NG35 78 aa12.49□□□□□ -0.41
CDKN2A-212ENST00000578845 MUSTN1Q8IVN3 82 aa12.48□□□□□ -0.41
CDKN2A-212ENST00000578845 A6NDN8 102 aa12.47□□□□□ -0.41
CDKN2A-212ENST00000578845 Q5XG85 94 aa12.47□□□□□ -0.41
CDKN2A-212ENST00000578845 A4D1N5 150 aa12.46□□□□□ -0.41
CDKN2A-212ENST00000578845 TRAV13-2A0A0B4J235 113 aa12.43□□□□□ -0.42
CDKN2A-212ENST00000578845 H7C2G1 150 aa12.43□□□□□ -0.42
CDKN2A-212ENST00000578845 VAMP8Q9BV40 100 aa12.43□□□□□ -0.42
CDKN2A-212ENST00000578845 NHP2Q9NX24 153 aaKnown RBP12.41□□□□□ -0.42
CDKN2A-212ENST00000578845 SMIM11BQ8TCY0 68 aa12.4□□□□□ -0.42
CDKN2A-212ENST00000578845 C9orf92A6NGG3 77 aa12.39□□□□□ -0.43
CDKN2A-212ENST00000578845 LCE2CQ5TA81 110 aa12.38□□□□□ -0.43
CDKN2A-212ENST00000578845 KRTAP19-2Q3LHN2 52 aa12.36□□□□□ -0.43
CDKN2A-212ENST00000578845 SPATA45Q537H7 98 aa12.36□□□□□ -0.43
CDKN2A-212ENST00000578845 PCOTHQ58A44 107 aa12.36□□□□□ -0.43
CDKN2A-212ENST00000578845 PYY3Q5JQD4 70 aa12.36□□□□□ -0.43
CDKN2A-212ENST00000578845 C1orf195Q5TG92 126 aa12.36□□□□□ -0.43
CDKN2A-212ENST00000578845 PAM16Q9Y3D7 125 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms