RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 LINC00308Q8TCZ7 52 aa8.56□□□□□ -1.04
MKS1-207ENST00000578789 HIGD2AQ9BW72 106 aa8.55□□□□□ -1.04
MKS1-207ENST00000578789 SPANXCQ9NY87 97 aa8.55□□□□□ -1.04
MKS1-207ENST00000578789 ETDCA0A1B0GVM5 59 aa8.54□□□□□ -1.04
MKS1-207ENST00000578789 S100A7L2Q5SY68 101 aa8.54□□□□□ -1.04
MKS1-207ENST00000578789 SPANXDQ9BXN6 97 aa8.54□□□□□ -1.04
MKS1-207ENST00000578789 ANAPC11Q9NYG5 84 aa8.53□□□□□ -1.04
MKS1-207ENST00000578789 C5orf52A6NGY3 159 aa8.52□□□□□ -1.05
MKS1-207ENST00000578789 B5MCH6 92 aa8.52□□□□□ -1.05
MKS1-207ENST00000578789 KRTAP13-2Q52LG2 175 aa8.52□□□□□ -1.05
MKS1-207ENST00000578789 SCGB1D4Q6XE38 83 aa8.52□□□□□ -1.05
MKS1-207ENST00000578789 PCP2Q8IVA1 136 aa8.52□□□□□ -1.05
MKS1-207ENST00000578789 PPDPFQ9H3Y8 114 aa8.52□□□□□ -1.05
MKS1-207ENST00000578789 TRAV23DV6A0A075B6W5 121 aa8.51□□□□□ -1.05
MKS1-207ENST00000578789 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
MKS1-207ENST00000578789 SMCR5Q8TEV8 140 aa8.51□□□□□ -1.05
MKS1-207ENST00000578789 SPRR4Q96PI1 79 aa8.51□□□□□ -1.05
MKS1-207ENST00000578789 ZNF706Q9Y5V0 76 aaPredicted RBP8.5□□□□□ -1.05
MKS1-207ENST00000578789 IFITM1P13164 125 aa8.49□□□□□ -1.05
MKS1-207ENST00000578789 Q6ZRX8 168 aa8.49□□□□□ -1.05
MKS1-207ENST00000578789 Q6ZVH6 145 aa8.49□□□□□ -1.05
MKS1-207ENST00000578789 CBY1Q9Y3M2 126 aa8.49□□□□□ -1.05
MKS1-207ENST00000578789 HSBP1L1C9JCN9 74 aa8.48□□□□□ -1.05
MKS1-207ENST00000578789 ZNF73O43830 326 aaPredicted RBP8.48□□□□□ -1.05
MKS1-207ENST00000578789 COPS9Q8WXC6 57 aa8.48□□□□□ -1.05
MKS1-207ENST00000578789 LINC00518Q8N0U6 118 aa8.47□□□□□ -1.05
MKS1-207ENST00000578789 Q9BRP9 147 aa8.47□□□□□ -1.05
MKS1-207ENST00000578789 LINC00483Q53H64 154 aa8.45□□□□□ -1.06
MKS1-207ENST00000578789 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
MKS1-207ENST00000578789 ERC2-IT1O76042 136 aa8.44□□□□□ -1.06
MKS1-207ENST00000578789 SCGB1D1O95968 90 aa8.44□□□□□ -1.06
MKS1-207ENST00000578789 JOSD1Q15040 202 aaPredicted RBP8.44□□□□□ -1.06
MKS1-207ENST00000578789 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
MKS1-207ENST00000578789 UBR4Q5T4S7 5183 aa8.44□□□□□ -1.06
MKS1-207ENST00000578789 MUSTN1Q8IVN3 82 aa8.43□□□□□ -1.06
MKS1-207ENST00000578789 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
MKS1-207ENST00000578789 LRP2P98164 4655 aa8.42□□□□□ -1.06
MKS1-207ENST00000578789 HINT1P49773 126 aaPredicted RBP8.41□□□□□ -1.06
MKS1-207ENST00000578789 CTAG1AP78358 180 aa8.41□□□□□ -1.06
MKS1-207ENST00000578789 XP32Q5T750 250 aa8.41□□□□□ -1.06
MKS1-207ENST00000578789 TSPAN13O95857 204 aa8.39□□□□□ -1.07
MKS1-207ENST00000578789 GAGE2AQ6NT46 116 aa8.39□□□□□ -1.07
MKS1-207ENST00000578789 COX8AP10176 69 aa8.38□□□□□ -1.07
MKS1-207ENST00000578789 ELOF1P60002 83 aaKnown RBP8.38□□□□□ -1.07
MKS1-207ENST00000578789 C6orf99Q4VX62 202 aa8.38□□□□□ -1.07
MKS1-207ENST00000578789 TRBV7-6A0A0J9YX20 115 aa8.37□□□□□ -1.07
MKS1-207ENST00000578789 COX7BP24311 80 aa8.37□□□□□ -1.07
MKS1-207ENST00000578789 DHRS4-AS1Q9P1J3 65 aa8.37□□□□□ -1.07
MKS1-207ENST00000578789 TRAV13-2A0A0B4J235 113 aa8.36□□□□□ -1.07
MKS1-207ENST00000578789 DLEU1O43261 78 aa8.36□□□□□ -1.07
MKS1-207ENST00000578789 A6NDN8 102 aa8.35□□□□□ -1.07
MKS1-207ENST00000578789 SPAG11AQ6PDA7 123 aa8.35□□□□□ -1.07
MKS1-207ENST00000578789 ST20-AS1Q8NBB2 130 aa8.35□□□□□ -1.07
MKS1-207ENST00000578789 PRR4Q16378 134 aa8.34□□□□□ -1.07
MKS1-207ENST00000578789 Q8NBF4 154 aa8.34□□□□□ -1.07
MKS1-207ENST00000578789 A0A1B0GWB2 263 aa8.33□□□□□ -1.08
MKS1-207ENST00000578789 A4D1N5 150 aa8.33□□□□□ -1.08
MKS1-207ENST00000578789 SPRR1BP22528 89 aa8.33□□□□□ -1.08
MKS1-207ENST00000578789 IGLV9-49A0A0B4J1Y8 123 aa8.32□□□□□ -1.08
MKS1-207ENST00000578789 MOBPQ13875 183 aa8.32□□□□□ -1.08
MKS1-207ENST00000578789 SPATA45Q537H7 98 aa8.32□□□□□ -1.08
MKS1-207ENST00000578789 VAMP8Q9BV40 100 aa8.32□□□□□ -1.08
MKS1-207ENST00000578789 PAM16Q9Y3D7 125 aa8.32□□□□□ -1.08
MKS1-207ENST00000578789 SSBP3-AS1Q7Z2R9 100 aa8.31□□□□□ -1.08
MKS1-207ENST00000578789 SMIM11BQ8TCY0 68 aa8.31□□□□□ -1.08
MKS1-207ENST00000578789 LPAP08519 4548 aa8.31□□□□□ -1.08
MKS1-207ENST00000578789 C14orf144Q96I85 54 aa8.3□□□□□ -1.08
MKS1-207ENST00000578789 HIST1H4GQ99525 98 aa8.3□□□□□ -1.08
MKS1-207ENST00000578789 HIGD1BQ9P298 99 aa8.3□□□□□ -1.08
MKS1-207ENST00000578789 A6NJY4 79 aa8.28□□□□□ -1.08
MKS1-207ENST00000578789 SLC25A34Q6PIV7 304 aa8.28□□□□□ -1.08
MKS1-207ENST00000578789 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
MKS1-207ENST00000578789 SPINK1P00995 79 aa8.27□□□□□ -1.09
MKS1-207ENST00000578789 C9orf153Q5TBE3 101 aa8.27□□□□□ -1.09
MKS1-207ENST00000578789 RPS29P62273 56 aaKnown RBP8.26□□□□□ -1.09
MKS1-207ENST00000578789 PYY3Q5JQD4 70 aa8.26□□□□□ -1.09
MKS1-207ENST00000578789 C2orf91Q6ZV80 131 aa8.26□□□□□ -1.09
MKS1-207ENST00000578789 TMA7Q9Y2S6 64 aaKnown RBP8.26□□□□□ -1.09
MKS1-207ENST00000578789 IGLV5-48A0A075B6I7 105 aa8.25□□□□□ -1.09
MKS1-207ENST00000578789 C12orf57Q99622 126 aa8.25□□□□□ -1.09
MKS1-207ENST00000578789 NHP2Q9NX24 153 aaKnown RBP8.25□□□□□ -1.09
MKS1-207ENST00000578789 TEX49A0A1B0GTD5 131 aa8.24□□□□□ -1.09
MKS1-207ENST00000578789 LINC01547P58512 204 aaPredicted RBP8.24□□□□□ -1.09
MKS1-207ENST00000578789 LAMTOR3Q9UHA4 124 aa8.24□□□□□ -1.09
MKS1-207ENST00000578789 VAMP3Q15836 100 aa8.23□□□□□ -1.09
MKS1-207ENST00000578789 TAL2Q16559 108 aa8.23□□□□□ -1.09
MKS1-207ENST00000578789 RNF213Q63HN8 5207 aa8.22□□□□□ -1.09
MKS1-207ENST00000578789 FP248Q71RG6 208 aaPredicted RBP8.22□□□□□ -1.09
MKS1-207ENST00000578789 TPRXLQ17RH7 258 aa8.21□□□□□ -1.1
MKS1-207ENST00000578789 LINC00575Q6W349 94 aa8.21□□□□□ -1.1
MKS1-207ENST00000578789 SMIM29Q86T20 159 aa8.21□□□□□ -1.1
MKS1-207ENST00000578789 DEFB105AQ8NG35 78 aa8.21□□□□□ -1.1
MKS1-207ENST00000578789 IGLV7-46A0A075B6I9 117 aa8.2□□□□□ -1.1
MKS1-207ENST00000578789 A0A0B4J2C4 111 aa8.2□□□□□ -1.1
MKS1-207ENST00000578789 SLC25A20O43772 301 aa8.2□□□□□ -1.1
MKS1-207ENST00000578789 CFC1BP0CG36 223 aa8.2□□□□□ -1.1
MKS1-207ENST00000578789 CFC1P0CG37 223 aa8.2□□□□□ -1.1
MKS1-207ENST00000578789 Q8N377 158 aa8.2□□□□□ -1.1
MKS1-207ENST00000578789 Q1RN00 199 aa8.19□□□□□ -1.1
MKS1-207ENST00000578789 BVES-AS1Q5T3Y7 98 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms