RNA–Protein interactions for RNA: ENST00000578609.1

SLC6A4-204, Transcript of solute carrier family 6 member 4, humanhuman

TSL 4

Gene SLC6A4, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-204ENST00000578609 COPS9Q8WXC6 57 aa9.13□□□□□ -0.95
SLC6A4-204ENST00000578609 TMA7Q9Y2S6 64 aaKnown RBP9.13□□□□□ -0.95
SLC6A4-204ENST00000578609 TRAV23DV6A0A075B6W5 121 aa9.11□□□□□ -0.95
SLC6A4-204ENST00000578609 PRR26Q8N8Z3 221 aa9.11□□□□□ -0.95
SLC6A4-204ENST00000578609 ETDCA0A1B0GVM5 59 aa9.1□□□□□ -0.95
SLC6A4-204ENST00000578609 COX8AP10176 69 aa9.1□□□□□ -0.95
SLC6A4-204ENST00000578609 LINC00518Q8N0U6 118 aa9.09□□□□□ -0.95
SLC6A4-204ENST00000578609 CBY1Q9Y3M2 126 aa9.09□□□□□ -0.95
SLC6A4-204ENST00000578609 B5MCH6 92 aa9.08□□□□□ -0.96
SLC6A4-204ENST00000578609 RPL13AP40429 203 aaKnown RBP9.08□□□□□ -0.96
SLC6A4-204ENST00000578609 MUSTN1Q8IVN3 82 aa9.08□□□□□ -0.96
SLC6A4-204ENST00000578609 HIGD2AQ9BW72 106 aa9.08□□□□□ -0.96
SLC6A4-204ENST00000578609 DLEU1O43261 78 aa9.07□□□□□ -0.96
SLC6A4-204ENST00000578609 ZNF73O43830 326 aaPredicted RBP9.07□□□□□ -0.96
SLC6A4-204ENST00000578609 Q6ZRX8 168 aa9.07□□□□□ -0.96
SLC6A4-204ENST00000578609 VAMP8Q9BV40 100 aa9.07□□□□□ -0.96
SLC6A4-204ENST00000578609 PAM16Q9Y3D7 125 aa9.07□□□□□ -0.96
SLC6A4-204ENST00000578609 FAM229BQ4G0N7 80 aa9.06□□□□□ -0.96
SLC6A4-204ENST00000578609 SPATA45Q537H7 98 aa9.06□□□□□ -0.96
SLC6A4-204ENST00000578609 SMCR5Q8TEV8 140 aa9.06□□□□□ -0.96
SLC6A4-204ENST00000578609 A0A087X002 238 aa9.05□□□□□ -0.96
SLC6A4-204ENST00000578609 PYY3Q5JQD4 70 aa9.05□□□□□ -0.96
SLC6A4-204ENST00000578609 OR13C6PQ8NH95 151 aa9.05□□□□□ -0.96
SLC6A4-204ENST00000578609 HMCN2Q8NDA2 5059 aa9.05□□□□□ -0.96
SLC6A4-204ENST00000578609 SPRR4Q96PI1 79 aa9.04□□□□□ -0.96
SLC6A4-204ENST00000578609 CRYGAP11844 174 aa9.03□□□□□ -0.96
SLC6A4-204ENST00000578609 Q9BRP9 147 aa9.03□□□□□ -0.96
SLC6A4-204ENST00000578609 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
SLC6A4-204ENST00000578609 ZNF706Q9Y5V0 76 aaPredicted RBP9.03□□□□□ -0.96
SLC6A4-204ENST00000578609 C14orf144Q96I85 54 aa9.02□□□□□ -0.97
SLC6A4-204ENST00000578609 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
SLC6A4-204ENST00000578609 TRAV13-2A0A0B4J235 113 aa9□□□□□ -0.97
SLC6A4-204ENST00000578609 ERC2-IT1O76042 136 aa9□□□□□ -0.97
SLC6A4-204ENST00000578609 SLC25A34Q6PIV7 304 aa9□□□□□ -0.97
SLC6A4-204ENST00000578609 HIGD1BQ9P298 99 aa9□□□□□ -0.97
SLC6A4-204ENST00000578609 A4D1N5 150 aa8.99□□□□□ -0.97
SLC6A4-204ENST00000578609 A6NDN8 102 aa8.99□□□□□ -0.97
SLC6A4-204ENST00000578609 HINT1P49773 126 aaPredicted RBP8.99□□□□□ -0.97
SLC6A4-204ENST00000578609 C6orf99Q4VX62 202 aa8.99□□□□□ -0.97
SLC6A4-204ENST00000578609 C2orf91Q6ZV80 131 aa8.99□□□□□ -0.97
SLC6A4-204ENST00000578609 HIST1H4GQ99525 98 aa8.99□□□□□ -0.97
SLC6A4-204ENST00000578609 ELOF1P60002 83 aaKnown RBP8.98□□□□□ -0.97
SLC6A4-204ENST00000578609 LINC00483Q53H64 154 aa8.98□□□□□ -0.97
SLC6A4-204ENST00000578609 TYMSOSQ8TAI1 123 aa8.98□□□□□ -0.97
SLC6A4-204ENST00000578609 TRBV7-6A0A0J9YX20 115 aa8.97□□□□□ -0.97
SLC6A4-204ENST00000578609 COX7BP24311 80 aa8.96□□□□□ -0.98
SLC6A4-204ENST00000578609 DHRS4-AS1Q9P1J3 65 aa8.95□□□□□ -0.98
SLC6A4-204ENST00000578609 A0A1B0GWB2 263 aa8.93□□□□□ -0.98
SLC6A4-204ENST00000578609 C3orf22Q8N5N4 141 aa8.93□□□□□ -0.98
SLC6A4-204ENST00000578609 SMIM11BQ8TCY0 68 aa8.93□□□□□ -0.98
SLC6A4-204ENST00000578609 TAL2Q16559 108 aa8.92□□□□□ -0.98
SLC6A4-204ENST00000578609 GAGE2AQ6NT46 116 aa8.92□□□□□ -0.98
SLC6A4-204ENST00000578609 C12orf57Q99622 126 aa8.91□□□□□ -0.98
SLC6A4-204ENST00000578609 ST20-AS1Q8NBB2 130 aa8.9□□□□□ -0.98
SLC6A4-204ENST00000578609 LINC00304Q8N9R0 145 aa8.89□□□□□ -0.99
SLC6A4-204ENST00000578609 SPRR1BP22528 89 aa8.88□□□□□ -0.99
SLC6A4-204ENST00000578609 CEND1Q8N111 149 aa8.88□□□□□ -0.99
SLC6A4-204ENST00000578609 A0A0B4J2C4 111 aa8.87□□□□□ -0.99
SLC6A4-204ENST00000578609 CFC1BP0CG36 223 aa8.87□□□□□ -0.99
SLC6A4-204ENST00000578609 CFC1P0CG37 223 aa8.87□□□□□ -0.99
SLC6A4-204ENST00000578609 CTAG1AP78358 180 aa8.86□□□□□ -0.99
SLC6A4-204ENST00000578609 UQCR10Q9UDW1 63 aa8.86□□□□□ -0.99
SLC6A4-204ENST00000578609 TMEM238LA0A1B0GVL6 79 aa8.84□□□□□ -0.99
SLC6A4-204ENST00000578609 A6NJY4 79 aa8.84□□□□□ -0.99
SLC6A4-204ENST00000578609 FXYD2P54710 66 aa8.84□□□□□ -0.99
SLC6A4-204ENST00000578609 HSD52Q0P140 79 aa8.84□□□□□ -0.99
SLC6A4-204ENST00000578609 MOBPQ13875 183 aa8.84□□□□□ -0.99
SLC6A4-204ENST00000578609 VAMP3Q15836 100 aa8.84□□□□□ -0.99
SLC6A4-204ENST00000578609 Q8NBF4 154 aa8.84□□□□□ -0.99
SLC6A4-204ENST00000578609 RAB37Q96AX2 223 aa8.84□□□□□ -0.99
SLC6A4-204ENST00000578609 NHP2Q9NX24 153 aaKnown RBP8.84□□□□□ -0.99
SLC6A4-204ENST00000578609 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
SLC6A4-204ENST00000578609 TSPAN13O95857 204 aa8.83□□□□□ -1
SLC6A4-204ENST00000578609 SMIM6P0DI80 62 aa8.83□□□□□ -1
SLC6A4-204ENST00000578609 IGLV5-48A0A075B6I7 105 aa8.82□□□□□ -1
SLC6A4-204ENST00000578609 SPAG11AQ6PDA7 123 aa8.82□□□□□ -1
SLC6A4-204ENST00000578609 LINC00575Q6W349 94 aa8.82□□□□□ -1
SLC6A4-204ENST00000578609 SSBP3-AS1Q7Z2R9 100 aa8.82□□□□□ -1
SLC6A4-204ENST00000578609 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
SLC6A4-204ENST00000578609 BVES-AS1Q5T3Y7 98 aa8.81□□□□□ -1
SLC6A4-204ENST00000578609 TEX49A0A1B0GTD5 131 aa8.8□□□□□ -1
SLC6A4-204ENST00000578609 SLC25A20O43772 301 aa8.8□□□□□ -1
SLC6A4-204ENST00000578609 H7C2G1 150 aa8.79□□□□□ -1
SLC6A4-204ENST00000578609 C9orf153Q5TBE3 101 aa8.79□□□□□ -1
SLC6A4-204ENST00000578609 DEFB105AQ8NG35 78 aa8.78□□□□□ -1
SLC6A4-204ENST00000578609 LAMTOR3Q9UHA4 124 aa8.78□□□□□ -1
SLC6A4-204ENST00000578609 PRO1854Q9UHT4 67 aa8.78□□□□□ -1
SLC6A4-204ENST00000578609 hADV29S1A0JD25 119 aa8.77□□□□□ -1.01
SLC6A4-204ENST00000578609 SMIM29Q86T20 159 aa8.77□□□□□ -1.01
SLC6A4-204ENST00000578609 LRP2P98164 4655 aa8.77□□□□□ -1.01
SLC6A4-204ENST00000578609 LOC105371267A0A1B0GV96 52 aa8.76□□□□□ -1.01
SLC6A4-204ENST00000578609 SPINK1P00995 79 aa8.76□□□□□ -1.01
SLC6A4-204ENST00000578609 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
SLC6A4-204ENST00000578609 UBR4Q5T4S7 5183 aa8.75□□□□□ -1.01
SLC6A4-204ENST00000578609 RPS29P62273 56 aaKnown RBP8.75□□□□□ -1.01
SLC6A4-204ENST00000578609 Q1RN00 199 aa8.75□□□□□ -1.01
SLC6A4-204ENST00000578609 Q8N377 158 aa8.75□□□□□ -1.01
SLC6A4-204ENST00000578609 PRR4Q16378 134 aa8.74□□□□□ -1.01
SLC6A4-204ENST00000578609 Q6ZQY7 126 aa8.74□□□□□ -1.01
SLC6A4-204ENST00000578609 PRO1933Q9H354 126 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms