RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 HRES1P13985 223 aa2.79□□□□□ -1.96
PTPRM-208ENST00000578600 POLR2KP53803 58 aaKnown RBP2.79□□□□□ -1.96
PTPRM-208ENST00000578600 KRTAP25-1Q3LHN0 102 aa2.79□□□□□ -1.96
PTPRM-208ENST00000578600 UNQ6190/PRO20217Q6UXQ8 127 aa2.79□□□□□ -1.96
PTPRM-208ENST00000578600 MBD3L1Q8WWY6 194 aa2.79□□□□□ -1.96
PTPRM-208ENST00000578600 TMEM242Q9NWH2 141 aa2.79□□□□□ -1.96
PTPRM-208ENST00000578600 LINC00862A6NCI5 91 aa2.78□□□□□ -1.96
PTPRM-208ENST00000578600 IGLV6-57P01721 117 aa2.78□□□□□ -1.96
PTPRM-208ENST00000578600 G0S2P27469 103 aa2.78□□□□□ -1.96
PTPRM-208ENST00000578600 IFI27P40305 119 aaPredicted RBP2.78□□□□□ -1.96
PTPRM-208ENST00000578600 ATP5L2Q7Z4Y8 100 aa2.78□□□□□ -1.96
PTPRM-208ENST00000578600 RPL39LQ96EH5 51 aaKnown RBP2.78□□□□□ -1.96
PTPRM-208ENST00000578600 C20orf78Q9BR46 151 aa2.78□□□□□ -1.96
PTPRM-208ENST00000578600 C2orf88Q9BSF0 95 aa2.78□□□□□ -1.96
PTPRM-208ENST00000578600 TMEM191AQ9H0A3 160 aa2.78□□□□□ -1.96
PTPRM-208ENST00000578600 F8VRH5 84 aa2.77□□□□□ -1.97
PTPRM-208ENST00000578600 FOXA3P55318 350 aaPredicted RBP2.77□□□□□ -1.97
PTPRM-208ENST00000578600 MT1HP80294 61 aa2.77□□□□□ -1.97
PTPRM-208ENST00000578600 RPL7L1Q6DKI1 246 aaKnown RBP2.77□□□□□ -1.97
PTPRM-208ENST00000578600 COX6B2Q6YFQ2 88 aa2.77□□□□□ -1.97
PTPRM-208ENST00000578600 Q8IZM0 81 aa2.77□□□□□ -1.97
PTPRM-208ENST00000578600 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
PTPRM-208ENST00000578600 TRBV20OR9-2A0A075B6H5 130 aa2.76□□□□□ -1.97
PTPRM-208ENST00000578600 A0A1B0GUT8 65 aa2.76□□□□□ -1.97
PTPRM-208ENST00000578600 S100A8P05109 93 aa2.76□□□□□ -1.97
PTPRM-208ENST00000578600 S100A12P80511 92 aa2.76□□□□□ -1.97
PTPRM-208ENST00000578600 SSBP3-AS1Q7Z2R9 100 aa2.76□□□□□ -1.97
PTPRM-208ENST00000578600 HIGD2AQ9BW72 106 aa2.76□□□□□ -1.97
PTPRM-208ENST00000578600 MAP1LC3AQ9H492 121 aa2.76□□□□□ -1.97
PTPRM-208ENST00000578600 MED9Q9NWA0 146 aa2.76□□□□□ -1.97
PTPRM-208ENST00000578600 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
PTPRM-208ENST00000578600 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
PTPRM-208ENST00000578600 KRTAP13-1Q8IUC0 172 aa2.75□□□□□ -1.97
PTPRM-208ENST00000578600 FAM213BQ8TBF2 198 aa2.75□□□□□ -1.97
PTPRM-208ENST00000578600 PLEKHB2Q96CS7 222 aa2.75□□□□□ -1.97
PTPRM-208ENST00000578600 FXYD6-FXYD2A0A087WZ82 144 aa2.74□□□□□ -1.97
PTPRM-208ENST00000578600 A0A1B0GU33 70 aa2.74□□□□□ -1.97
PTPRM-208ENST00000578600 PPBPP02775 128 aa2.74□□□□□ -1.97
PTPRM-208ENST00000578600 HERVK_113P63121 156 aa2.74□□□□□ -1.97
PTPRM-208ENST00000578600 SFTA2Q6UW10 78 aa2.74□□□□□ -1.97
PTPRM-208ENST00000578600 Q6ZUT4 128 aa2.74□□□□□ -1.97
PTPRM-208ENST00000578600 SLC51BQ86UW2 128 aa2.74□□□□□ -1.97
PTPRM-208ENST00000578600 TMEM141Q96I45 108 aa2.74□□□□□ -1.97
PTPRM-208ENST00000578600 RNASE7Q9H1E1 156 aaKnown RBP2.74□□□□□ -1.97
PTPRM-208ENST00000578600 XAGE1AQ9HD64 81 aa2.74□□□□□ -1.97
PTPRM-208ENST00000578600 GNG13Q9P2W3 67 aa2.74□□□□□ -1.97
PTPRM-208ENST00000578600 MUC17Q685J3 4493 aa2.73□□□□□ -1.97
PTPRM-208ENST00000578600 KANTRA0A1W2PQU2 76 aa2.73□□□□□ -1.97
PTPRM-208ENST00000578600 LINC01549A6NIU2 74 aa2.73□□□□□ -1.97
PTPRM-208ENST00000578600 F8W036 122 aa2.73□□□□□ -1.97
PTPRM-208ENST00000578600 K7EMI3 77 aa2.73□□□□□ -1.97
PTPRM-208ENST00000578600 C2orf82Q6UX34 121 aa2.73□□□□□ -1.97
PTPRM-208ENST00000578600 TOMM7Q9P0U1 55 aa2.73□□□□□ -1.97
PTPRM-208ENST00000578600 CKS2P33552 79 aa2.72□□□□□ -1.97
PTPRM-208ENST00000578600 LINC00313P59037 77 aa2.72□□□□□ -1.97
PTPRM-208ENST00000578600 ZNF345Q14585 488 aa2.72□□□□□ -1.97
PTPRM-208ENST00000578600 COMMD7Q86VX2 200 aa2.72□□□□□ -1.97
PTPRM-208ENST00000578600 LIMD2Q9BT23 127 aa2.72□□□□□ -1.97
PTPRM-208ENST00000578600 TMEM126AQ9H061 195 aa2.72□□□□□ -1.97
PTPRM-208ENST00000578600 HIGD1CA8MV81 97 aa2.71□□□□□ -1.98
PTPRM-208ENST00000578600 IGKV4-1P06312 121 aa2.71□□□□□ -1.98
PTPRM-208ENST00000578600 ZNF22P17026 224 aaPredicted RBP2.71□□□□□ -1.98
PTPRM-208ENST00000578600 DDTP30046 118 aa2.71□□□□□ -1.98
PTPRM-208ENST00000578600 COX17Q14061 63 aa2.71□□□□□ -1.98
PTPRM-208ENST00000578600 AKAP14Q86UN6 197 aa2.71□□□□□ -1.98
PTPRM-208ENST00000578600 SPRR4Q96PI1 79 aa2.71□□□□□ -1.98
PTPRM-208ENST00000578600 A0A1B0GV50 99 aa2.7□□□□□ -1.98
PTPRM-208ENST00000578600 ARPC5O15511 151 aa2.7□□□□□ -1.98
PTPRM-208ENST00000578600 MRPL51Q4U2R6 128 aaKnown RBP2.7□□□□□ -1.98
PTPRM-208ENST00000578600 PCOTHQ58A44 107 aa2.7□□□□□ -1.98
PTPRM-208ENST00000578600 SMIM2Q9BVW6 85 aa2.7□□□□□ -1.98
PTPRM-208ENST00000578600 KRTAP4-1Q9BYQ7 146 aa2.7□□□□□ -1.98
PTPRM-208ENST00000578600 NAT8BQ9UHF3 227 aa2.7□□□□□ -1.98
PTPRM-208ENST00000578600 CYSLTR1Q9Y271 337 aa2.7□□□□□ -1.98
PTPRM-208ENST00000578600 LAMTOR2Q9Y2Q5 125 aa2.7□□□□□ -1.98
PTPRM-208ENST00000578600 HMSDA8MTL9 139 aa2.69□□□□□ -1.98
PTPRM-208ENST00000578600 H3BRM9 83 aa2.69□□□□□ -1.98
PTPRM-208ENST00000578600 S100A6P06703 90 aa2.69□□□□□ -1.98
PTPRM-208ENST00000578600 RAB5BP61020 215 aa2.69□□□□□ -1.98
PTPRM-208ENST00000578600 PRLHP81277 87 aa2.69□□□□□ -1.98
PTPRM-208ENST00000578600 JOSD1Q15040 202 aaPredicted RBP2.69□□□□□ -1.98
PTPRM-208ENST00000578600 P0C880 135 aa2.68□□□□□ -1.98
PTPRM-208ENST00000578600 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
PTPRM-208ENST00000578600 RPL39P62891 51 aaKnown RBP2.68□□□□□ -1.98
PTPRM-208ENST00000578600 C1orf195Q5TG92 126 aa2.68□□□□□ -1.98
PTPRM-208ENST00000578600 OSTCQ9NRP0 149 aa2.68□□□□□ -1.98
PTPRM-208ENST00000578600 SYNE2Q8WXH0 6885 aaKnown RBP2.67□□□□□ -1.98
PTPRM-208ENST00000578600 TRAV9-1A0A075B6T8 112 aa2.67□□□□□ -1.98
PTPRM-208ENST00000578600 LINC00587B1AMM8 73 aa2.67□□□□□ -1.98
PTPRM-208ENST00000578600 M0R378 163 aa2.67□□□□□ -1.98
PTPRM-208ENST00000578600 CEBPGP53567 150 aa2.67□□□□□ -1.98
PTPRM-208ENST00000578600 BATFQ16520 125 aa2.67□□□□□ -1.98
PTPRM-208ENST00000578600 KRTAP19-2Q3LHN2 52 aa2.67□□□□□ -1.98
PTPRM-208ENST00000578600 ALKAL2Q6UX46 152 aa2.67□□□□□ -1.98
PTPRM-208ENST00000578600 COX7B2Q8TF08 81 aa2.67□□□□□ -1.98
PTPRM-208ENST00000578600 AMELXQ99217 191 aa2.67□□□□□ -1.98
PTPRM-208ENST00000578600 ETDCA0A1B0GVM5 59 aa2.66□□□□□ -1.98
PTPRM-208ENST00000578600 TSPEAR-AS2P59090 65 aa2.66□□□□□ -1.98
PTPRM-208ENST00000578600 CDKN2A-AS1Q9UH64 79 aa2.66□□□□□ -1.98
PTPRM-208ENST00000578600 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms