RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ANK2Q01484 3957 aa7.2□□□□□ -1.26
SKA2-204ENST00000578519 ETDCA0A1B0GVM5 59 aa7.2□□□□□ -1.26
SKA2-204ENST00000578519 MRPL55Q7Z7F7 128 aaKnown RBP7.2□□□□□ -1.26
SKA2-204ENST00000578519 OBSCN-AS1Q96MR7 158 aa7.2□□□□□ -1.26
SKA2-204ENST00000578519 CDIP1Q9H305 208 aa7.2□□□□□ -1.26
SKA2-204ENST00000578519 LAMTOR3Q9UHA4 124 aa7.2□□□□□ -1.26
SKA2-204ENST00000578519 C22orf24Q9Y442 160 aa7.2□□□□□ -1.26
SKA2-204ENST00000578519 SERTAD4-AS1Q5TG53 156 aa7.19□□□□□ -1.26
SKA2-204ENST00000578519 IGLV1-50A0A075B6I6 118 aa7.18□□□□□ -1.26
SKA2-204ENST00000578519 RBM3P98179 157 aaKnown RBP7.18□□□□□ -1.26
SKA2-204ENST00000578519 GAGE2AQ6NT46 116 aa7.18□□□□□ -1.26
SKA2-204ENST00000578519 Q6ZQY7 126 aa7.18□□□□□ -1.26
SKA2-204ENST00000578519 C9orf163Q8N9P6 203 aa7.18□□□□□ -1.26
SKA2-204ENST00000578519 MGAM2Q2M2H8 2515 aa7.18□□□□□ -1.26
SKA2-204ENST00000578519 SVIPQ8NHG7 77 aa7.17□□□□□ -1.26
SKA2-204ENST00000578519 DSCR8Q96T75 97 aa7.17□□□□□ -1.26
SKA2-204ENST00000578519 NOTCH1P46531 2555 aa7.17□□□□□ -1.26
SKA2-204ENST00000578519 CCKP06307 115 aa7.16□□□□□ -1.26
SKA2-204ENST00000578519 FAM19A5Q7Z5A7 132 aaPredicted RBP7.16□□□□□ -1.26
SKA2-204ENST00000578519 LINC00643Q86TS7 51 aa7.16□□□□□ -1.26
SKA2-204ENST00000578519 WWC2-AS2Q96NR7 200 aa7.16□□□□□ -1.26
SKA2-204ENST00000578519 C14orf132Q9NPU4 83 aa7.16□□□□□ -1.26
SKA2-204ENST00000578519 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.15□□□□□ -1.26
SKA2-204ENST00000578519 LRCOL1A6NCL2 159 aa7.15□□□□□ -1.26
SKA2-204ENST00000578519 TENM3Q9P273 2699 aa7.14□□□□□ -1.27
SKA2-204ENST00000578519 PKD1L1Q8TDX9 2849 aa7.14□□□□□ -1.27
SKA2-204ENST00000578519 SPRR1AP35321 89 aa7.14□□□□□ -1.27
SKA2-204ENST00000578519 REG3GQ6UW15 175 aa7.14□□□□□ -1.27
SKA2-204ENST00000578519 A0A096LNI7 61 aa7.13□□□□□ -1.27
SKA2-204ENST00000578519 IGKV2-24A0A0C4DH68 120 aa7.13□□□□□ -1.27
SKA2-204ENST00000578519 RPL37AP8A6NKH3 93 aa7.13□□□□□ -1.27
SKA2-204ENST00000578519 M0R2N4 97 aa7.13□□□□□ -1.27
SKA2-204ENST00000578519 XGP55808 180 aa7.13□□□□□ -1.27
SKA2-204ENST00000578519 C1orf134Q5TEV5 83 aa7.13□□□□□ -1.27
SKA2-204ENST00000578519 Q6Q795 121 aa7.13□□□□□ -1.27
SKA2-204ENST00000578519 Q6ZRN7 208 aaPredicted RBP7.13□□□□□ -1.27
SKA2-204ENST00000578519 Q6ZRX8 168 aa7.13□□□□□ -1.27
SKA2-204ENST00000578519 DPH3Q96FX2 82 aa7.13□□□□□ -1.27
SKA2-204ENST00000578519 IMUPQ9GZP8 106 aa7.13□□□□□ -1.27
SKA2-204ENST00000578519 LOC110117498A0A087WWA1 95 aa7.12□□□□□ -1.27
SKA2-204ENST00000578519 FAM168BA1KXE4 195 aa7.12□□□□□ -1.27
SKA2-204ENST00000578519 B5MCH6 92 aa7.12□□□□□ -1.27
SKA2-204ENST00000578519 C3orf84H3BNL1 204 aa7.12□□□□□ -1.27
SKA2-204ENST00000578519 HUWE1Q7Z6Z7 4374 aaKnown RBP7.12□□□□□ -1.27
SKA2-204ENST00000578519 A0A087WTM6 91 aa7.11□□□□□ -1.27
SKA2-204ENST00000578519 MT-ATP8P03928 68 aa7.11□□□□□ -1.27
SKA2-204ENST00000578519 NDUFV3P56181 108 aaKnown RBP7.11□□□□□ -1.27
SKA2-204ENST00000578519 UBE2BP63146 152 aa7.11□□□□□ -1.27
SKA2-204ENST00000578519 Q6ZR54 194 aa7.11□□□□□ -1.27
SKA2-204ENST00000578519 LY6G6CO95867 125 aa7.1□□□□□ -1.27
SKA2-204ENST00000578519 UBL5Q9BZL1 73 aa7.1□□□□□ -1.27
SKA2-204ENST00000578519 SDIM1Q6ZPB5 146 aa7.09□□□□□ -1.27
SKA2-204ENST00000578519 KRTAP4-16G5E9R7 235 aaPredicted RBP7.08□□□□□ -1.28
SKA2-204ENST00000578519 NBEAL1Q6ZS30 2694 aa7.08□□□□□ -1.28
SKA2-204ENST00000578519 A0A1B0GW54 56 aa7.07□□□□□ -1.28
SKA2-204ENST00000578519 A0A1W2PNN7 141 aa7.07□□□□□ -1.28
SKA2-204ENST00000578519 ATP5EP2Q5VTU8 51 aa7.07□□□□□ -1.28
SKA2-204ENST00000578519 Q6ZQT0 140 aa7.07□□□□□ -1.28
SKA2-204ENST00000578519 FAM19A1Q7Z5A9 133 aa7.07□□□□□ -1.28
SKA2-204ENST00000578519 TRBV7-7A0A0K0K1E9 115 aa7.06□□□□□ -1.28
SKA2-204ENST00000578519 H0Y9J4 135 aa7.06□□□□□ -1.28
SKA2-204ENST00000578519 KRTAP7-1Q8IUC3 87 aa7.06□□□□□ -1.28
SKA2-204ENST00000578519 A0A1B0GV72 72 aa7.05□□□□□ -1.28
SKA2-204ENST00000578519 F8WEM9 126 aa7.05□□□□□ -1.28
SKA2-204ENST00000578519 Q6JHZ5 121 aa7.05□□□□□ -1.28
SKA2-204ENST00000578519 DEFB105AQ8NG35 78 aa7.05□□□□□ -1.28
SKA2-204ENST00000578519 LINC00476Q8WZB0 136 aa7.05□□□□□ -1.28
SKA2-204ENST00000578519 TRBV7-4A0A0J9YYF1 115 aa7.04□□□□□ -1.28
SKA2-204ENST00000578519 RTL8CO15255 209 aa7.04□□□□□ -1.28
SKA2-204ENST00000578519 TNP2Q05952 138 aa7.04□□□□□ -1.28
SKA2-204ENST00000578519 LINC00846Q9NV44 126 aa7.04□□□□□ -1.28
SKA2-204ENST00000578519 IGLV5-48A0A075B6I7 105 aa7.03□□□□□ -1.28
SKA2-204ENST00000578519 IGLV5-52A0A0A0MRZ9 124 aa7.03□□□□□ -1.28
SKA2-204ENST00000578519 UBE2AP49459 152 aa7.03□□□□□ -1.28
SKA2-204ENST00000578519 Q8N377 158 aa7.03□□□□□ -1.28
SKA2-204ENST00000578519 PHF5AQ7RTV0 110 aaKnown RBP7.02□□□□□ -1.29
SKA2-204ENST00000578519 SPACA4Q8TDM5 124 aa7.02□□□□□ -1.29
SKA2-204ENST00000578519 Q9BRP9 147 aa7.02□□□□□ -1.29
SKA2-204ENST00000578519 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
SKA2-204ENST00000578519 FUSP35637 526 aaKnown RBP eCLIP7.01□□□□□ -1.29
SKA2-204ENST00000578519 SMCR5Q8TEV8 140 aa7.01□□□□□ -1.29
SKA2-204ENST00000578519 DNAH9Q9NYC9 4486 aa7.01□□□□□ -1.29
SKA2-204ENST00000578519 EPM2AB3EWF7 344 aa7□□□□□ -1.29
SKA2-204ENST00000578519 BCE1O60756 84 aa7□□□□□ -1.29
SKA2-204ENST00000578519 HIGD2AQ9BW72 106 aa6.99□□□□□ -1.29
SKA2-204ENST00000578519 LINC01547P58512 204 aaPredicted RBP6.98□□□□□ -1.29
SKA2-204ENST00000578519 ANAPC13Q9BS18 74 aa6.97□□□□□ -1.29
SKA2-204ENST00000578519 PLAC8Q9NZF1 115 aa6.97□□□□□ -1.29
SKA2-204ENST00000578519 PRLHP81277 87 aa6.96□□□□□ -1.3
SKA2-204ENST00000578519 NREPQ16612 68 aa6.96□□□□□ -1.3
SKA2-204ENST00000578519 C1orf137Q5JT78 98 aa6.96□□□□□ -1.3
SKA2-204ENST00000578519 ST20-AS1Q8NBB2 130 aa6.96□□□□□ -1.3
SKA2-204ENST00000578519 ZNF706Q9Y5V0 76 aaPredicted RBP6.96□□□□□ -1.3
SKA2-204ENST00000578519 STAB2Q8WWQ8 2551 aa6.95□□□□□ -1.3
SKA2-204ENST00000578519 IGKV3D-7A0A0C4DH55 119 aa6.95□□□□□ -1.3
SKA2-204ENST00000578519 ERC2-IT1O76042 136 aa6.95□□□□□ -1.3
SKA2-204ENST00000578519 SPRR1BP22528 89 aa6.95□□□□□ -1.3
SKA2-204ENST00000578519 CXCL6P80162 114 aa6.95□□□□□ -1.3
SKA2-204ENST00000578519 KRTAP4-11Q9BYQ6 195 aa6.95□□□□□ -1.3
SKA2-204ENST00000578519 HAMPP81172 84 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms