RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 C14orf144Q96I85 54 aa12.95□□□□□ -0.34
CDC42EP4-203ENST00000578516 ETDCA0A1B0GVM5 59 aa12.94□□□□□ -0.34
CDC42EP4-203ENST00000578516 COX8AP10176 69 aa12.94□□□□□ -0.34
CDC42EP4-203ENST00000578516 OR13C6PQ8NH95 151 aa12.94□□□□□ -0.34
CDC42EP4-203ENST00000578516 VAMP8Q9BV40 100 aa12.94□□□□□ -0.34
CDC42EP4-203ENST00000578516 TRAV23DV6A0A075B6W5 121 aa12.93□□□□□ -0.34
CDC42EP4-203ENST00000578516 A0A087X002 238 aa12.91□□□□□ -0.34
CDC42EP4-203ENST00000578516 B5MCH6 92 aa12.91□□□□□ -0.34
CDC42EP4-203ENST00000578516 IFITM1P13164 125 aa12.91□□□□□ -0.34
CDC42EP4-203ENST00000578516 SMCR5Q8TEV8 140 aa12.9□□□□□ -0.34
CDC42EP4-203ENST00000578516 ERC2-IT1O76042 136 aa12.88□□□□□ -0.35
CDC42EP4-203ENST00000578516 Q6ZVH6 145 aa12.88□□□□□ -0.35
CDC42EP4-203ENST00000578516 Q9BRP9 147 aa12.87□□□□□ -0.35
CDC42EP4-203ENST00000578516 ZNF73O43830 326 aaPredicted RBP12.86□□□□□ -0.35
CDC42EP4-203ENST00000578516 S100A12P80511 92 aa12.86□□□□□ -0.35
CDC42EP4-203ENST00000578516 C2orf91Q6ZV80 131 aa12.85□□□□□ -0.35
CDC42EP4-203ENST00000578516 DLEU1O43261 78 aa12.84□□□□□ -0.35
CDC42EP4-203ENST00000578516 KRTAP13-2Q52LG2 175 aa12.84□□□□□ -0.35
CDC42EP4-203ENST00000578516 Q6ZRX8 168 aa12.84□□□□□ -0.35
CDC42EP4-203ENST00000578516 PPDPFQ9H3Y8 114 aa12.84□□□□□ -0.35
CDC42EP4-203ENST00000578516 A4D1N5 150 aa12.83□□□□□ -0.36
CDC42EP4-203ENST00000578516 LINC00518Q8N0U6 118 aa12.83□□□□□ -0.36
CDC42EP4-203ENST00000578516 SPRR4Q96PI1 79 aa12.83□□□□□ -0.36
CDC42EP4-203ENST00000578516 C12orf57Q99622 126 aa12.83□□□□□ -0.36
CDC42EP4-203ENST00000578516 A6NDN8 102 aa12.82□□□□□ -0.36
CDC42EP4-203ENST00000578516 COPS9Q8WXC6 57 aa12.82□□□□□ -0.36
CDC42EP4-203ENST00000578516 SLC25A34Q6PIV7 304 aa12.81□□□□□ -0.36
CDC42EP4-203ENST00000578516 HIST1H4GQ99525 98 aa12.81□□□□□ -0.36
CDC42EP4-203ENST00000578516 C6orf99Q4VX62 202 aa12.8□□□□□ -0.36
CDC42EP4-203ENST00000578516 C3orf22Q8N5N4 141 aa12.79□□□□□ -0.36
CDC42EP4-203ENST00000578516 CRYGAP11844 174 aa12.78□□□□□ -0.36
CDC42EP4-203ENST00000578516 RPL13AP40429 203 aaKnown RBP12.76□□□□□ -0.37
CDC42EP4-203ENST00000578516 ST20-AS1Q8NBB2 130 aa12.76□□□□□ -0.37
CDC42EP4-203ENST00000578516 FAM229BQ4G0N7 80 aa12.75□□□□□ -0.37
CDC42EP4-203ENST00000578516 TYMSOSQ8TAI1 123 aa12.75□□□□□ -0.37
CDC42EP4-203ENST00000578516 HIGD1BQ9P298 99 aa12.75□□□□□ -0.37
CDC42EP4-203ENST00000578516 GAGE2AQ6NT46 116 aa12.74□□□□□ -0.37
CDC42EP4-203ENST00000578516 SMIM11BQ8TCY0 68 aa12.74□□□□□ -0.37
CDC42EP4-203ENST00000578516 COX7BP24311 80 aa12.73□□□□□ -0.37
CDC42EP4-203ENST00000578516 TRAV13-2A0A0B4J235 113 aa12.72□□□□□ -0.37
CDC42EP4-203ENST00000578516 ELOF1P60002 83 aaKnown RBP12.72□□□□□ -0.37
CDC42EP4-203ENST00000578516 CBY1Q9Y3M2 126 aa12.72□□□□□ -0.37
CDC42EP4-203ENST00000578516 ZNF706Q9Y5V0 76 aaPredicted RBP12.72□□□□□ -0.37
CDC42EP4-203ENST00000578516 HINT1P49773 126 aaPredicted RBP12.7□□□□□ -0.38
CDC42EP4-203ENST00000578516 HMCN2Q8NDA2 5059 aa12.69□□□□□ -0.38
CDC42EP4-203ENST00000578516 LINC00483Q53H64 154 aa12.68□□□□□ -0.38
CDC42EP4-203ENST00000578516 TSPAN13O95857 204 aa12.67□□□□□ -0.38
CDC42EP4-203ENST00000578516 CFC1BP0CG36 223 aa12.66□□□□□ -0.38
CDC42EP4-203ENST00000578516 CFC1P0CG37 223 aa12.66□□□□□ -0.38
CDC42EP4-203ENST00000578516 FXYD2P54710 66 aa12.66□□□□□ -0.38
CDC42EP4-203ENST00000578516 CEND1Q8N111 149 aa12.65□□□□□ -0.38
CDC42EP4-203ENST00000578516 A0A1B0GWB2 263 aa12.64□□□□□ -0.39
CDC42EP4-203ENST00000578516 H7C2G1 150 aa12.64□□□□□ -0.39
CDC42EP4-203ENST00000578516 IGLV9-49A0A0B4J1Y8 123 aa12.63□□□□□ -0.39
CDC42EP4-203ENST00000578516 PRO1933Q9H354 126 aa12.63□□□□□ -0.39
CDC42EP4-203ENST00000578516 DHRS4-AS1Q9P1J3 65 aa12.63□□□□□ -0.39
CDC42EP4-203ENST00000578516 TRBV7-6A0A0J9YX20 115 aa12.61□□□□□ -0.39
CDC42EP4-203ENST00000578516 MOBPQ13875 183 aa12.61□□□□□ -0.39
CDC42EP4-203ENST00000578516 TAL2Q16559 108 aa12.61□□□□□ -0.39
CDC42EP4-203ENST00000578516 LINC00304Q8N9R0 145 aa12.61□□□□□ -0.39
CDC42EP4-203ENST00000578516 UQCR10Q9UDW1 63 aa12.6□□□□□ -0.39
CDC42EP4-203ENST00000578516 LOC105371267A0A1B0GV96 52 aa12.59□□□□□ -0.39
CDC42EP4-203ENST00000578516 A0A0B4J2C4 111 aa12.58□□□□□ -0.4
CDC42EP4-203ENST00000578516 HSD52Q0P140 79 aa12.58□□□□□ -0.4
CDC42EP4-203ENST00000578516 Q8NBF4 154 aa12.58□□□□□ -0.4
CDC42EP4-203ENST00000578516 DEFB105AQ8NG35 78 aa12.58□□□□□ -0.4
CDC42EP4-203ENST00000578516 RAB37Q96AX2 223 aa12.58□□□□□ -0.4
CDC42EP4-203ENST00000578516 K7ERJ3 54 aa12.55□□□□□ -0.4
CDC42EP4-203ENST00000578516 SMIM6P0DI80 62 aa12.55□□□□□ -0.4
CDC42EP4-203ENST00000578516 LINC01547P58512 204 aaPredicted RBP12.55□□□□□ -0.4
CDC42EP4-203ENST00000578516 C9orf153Q5TBE3 101 aa12.54□□□□□ -0.4
CDC42EP4-203ENST00000578516 SPRR1BP22528 89 aa12.53□□□□□ -0.4
CDC42EP4-203ENST00000578516 Q1RN00 199 aa12.52□□□□□ -0.41
CDC42EP4-203ENST00000578516 LINC00575Q6W349 94 aa12.52□□□□□ -0.41
CDC42EP4-203ENST00000578516 RETNLBQ9BQ08 111 aa12.52□□□□□ -0.41
CDC42EP4-203ENST00000578516 NHP2Q9NX24 153 aaKnown RBP12.52□□□□□ -0.41
CDC42EP4-203ENST00000578516 TMEM238LA0A1B0GVL6 79 aa12.5□□□□□ -0.41
CDC42EP4-203ENST00000578516 A6NJY4 79 aa12.5□□□□□ -0.41
CDC42EP4-203ENST00000578516 VAMP3Q15836 100 aa12.49□□□□□ -0.41
CDC42EP4-203ENST00000578516 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
CDC42EP4-203ENST00000578516 SMIM29Q86T20 159 aa12.48□□□□□ -0.41
CDC42EP4-203ENST00000578516 IGLV5-48A0A075B6I7 105 aa12.47□□□□□ -0.41
CDC42EP4-203ENST00000578516 TEX49A0A1B0GTD5 131 aa12.46□□□□□ -0.41
CDC42EP4-203ENST00000578516 PRR4Q16378 134 aa12.46□□□□□ -0.41
CDC42EP4-203ENST00000578516 Q6ZQY7 126 aa12.46□□□□□ -0.41
CDC42EP4-203ENST00000578516 Q8N377 158 aa12.46□□□□□ -0.41
CDC42EP4-203ENST00000578516 FAM218AQ96MZ4 157 aa12.46□□□□□ -0.41
CDC42EP4-203ENST00000578516 hADV29S1A0JD25 119 aa12.45□□□□□ -0.42
CDC42EP4-203ENST00000578516 SLC25A20O43772 301 aa12.45□□□□□ -0.42
CDC42EP4-203ENST00000578516 BVES-AS1Q5T3Y7 98 aa12.45□□□□□ -0.42
CDC42EP4-203ENST00000578516 A0A0G2JQZ4 141 aa12.43□□□□□ -0.42
CDC42EP4-203ENST00000578516 LAMTOR3Q9UHA4 124 aa12.43□□□□□ -0.42
CDC42EP4-203ENST00000578516 LPAP08519 4548 aa12.43□□□□□ -0.42
CDC42EP4-203ENST00000578516 TRIAP1O43715 76 aa12.42□□□□□ -0.42
CDC42EP4-203ENST00000578516 SSBP3-AS1Q7Z2R9 100 aa12.42□□□□□ -0.42
CDC42EP4-203ENST00000578516 CTAG1AP78358 180 aa12.41□□□□□ -0.42
CDC42EP4-203ENST00000578516 C4orf48Q5BLP8 95 aa12.4□□□□□ -0.42
CDC42EP4-203ENST00000578516 LRP2P98164 4655 aa12.4□□□□□ -0.42
CDC42EP4-203ENST00000578516 SPAG11AQ6PDA7 123 aa12.39□□□□□ -0.43
CDC42EP4-203ENST00000578516 HRCT1Q6UXD1 115 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms