RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 C15orf56Q8N910 161 aa7.08□□□□□ -1.28
SEC22B-201ENST00000578049 LCA10Q71F78 164 aa7.07□□□□□ -1.28
SEC22B-201ENST00000578049 C19orf73Q9NVV2 129 aa7.06□□□□□ -1.28
SEC22B-201ENST00000578049 GIG44P09565 113 aaPredicted RBP7.06□□□□□ -1.28
SEC22B-201ENST00000578049 MIR22HGQ0VDD5 57 aa7.06□□□□□ -1.28
SEC22B-201ENST00000578049 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
SEC22B-201ENST00000578049 Q1T7F1 81 aa7.04□□□□□ -1.28
SEC22B-201ENST00000578049 C9orf129Q5T035 196 aaKnown RBP7.04□□□□□ -1.28
SEC22B-201ENST00000578049 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
SEC22B-201ENST00000578049 CDC42SE1Q9NRR8 79 aa7.04□□□□□ -1.28
SEC22B-201ENST00000578049 A0A1W2PNM2 257 aa7.03□□□□□ -1.28
SEC22B-201ENST00000578049 FAM168BA1KXE4 195 aa7.03□□□□□ -1.28
SEC22B-201ENST00000578049 OCR1Q9BZK8 76 aa7.03□□□□□ -1.28
SEC22B-201ENST00000578049 ZNF861PO60384 105 aa7.01□□□□□ -1.29
SEC22B-201ENST00000578049 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
SEC22B-201ENST00000578049 C9orf163Q8N9P6 203 aa7.01□□□□□ -1.29
SEC22B-201ENST00000578049 A0A096LNT2 108 aa7.01□□□□□ -1.29
SEC22B-201ENST00000578049 Q96NJ1 140 aa7□□□□□ -1.29
SEC22B-201ENST00000578049 SPINT4Q6UDR6 99 aa6.99□□□□□ -1.29
SEC22B-201ENST00000578049 CNBPP62633 177 aaKnown RBP6.98□□□□□ -1.29
SEC22B-201ENST00000578049 KRTAP24-1Q3LI83 254 aa6.98□□□□□ -1.29
SEC22B-201ENST00000578049 ZNF575Q86XF7 245 aa6.98□□□□□ -1.29
SEC22B-201ENST00000578049 SPRR4Q96PI1 79 aa6.98□□□□□ -1.29
SEC22B-201ENST00000578049 IGLV8-61A0A075B6I0 122 aa6.97□□□□□ -1.29
SEC22B-201ENST00000578049 EPG5Q9HCE0 2579 aa6.96□□□□□ -1.3
SEC22B-201ENST00000578049 CENPFP49454 3210 aa6.96□□□□□ -1.3
SEC22B-201ENST00000578049 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
SEC22B-201ENST00000578049 PLA2G1BP04054 148 aaKnown RBP6.92□□□□□ -1.3
SEC22B-201ENST00000578049 DSCR10P59022 87 aa6.92□□□□□ -1.3
SEC22B-201ENST00000578049 IGLV7-46A0A075B6I9 117 aa6.91□□□□□ -1.3
SEC22B-201ENST00000578049 FAM104AQ969W3 186 aa6.91□□□□□ -1.3
SEC22B-201ENST00000578049 USP24Q9UPU5 2620 aa6.9□□□□□ -1.31
SEC22B-201ENST00000578049 Q75L30 129 aa6.9□□□□□ -1.31
SEC22B-201ENST00000578049 LINC00304Q8N9R0 145 aa6.88□□□□□ -1.31
SEC22B-201ENST00000578049 A0A087WTM6 91 aa6.87□□□□□ -1.31
SEC22B-201ENST00000578049 IGLV7-43P04211 117 aa6.87□□□□□ -1.31
SEC22B-201ENST00000578049 WWC2-AS2Q96NR7 200 aa6.86□□□□□ -1.31
SEC22B-201ENST00000578049 MGAM2Q2M2H8 2515 aa6.85□□□□□ -1.31
SEC22B-201ENST00000578049 Q5XG85 94 aa6.85□□□□□ -1.31
SEC22B-201ENST00000578049 A0A1W2PNN7 141 aa6.85□□□□□ -1.31
SEC22B-201ENST00000578049 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
SEC22B-201ENST00000578049 K7EIL1 84 aa6.84□□□□□ -1.32
SEC22B-201ENST00000578049 PRRC2CQ9Y520 2896 aaKnown RBP6.83□□□□□ -1.32
SEC22B-201ENST00000578049 PSORS1C2Q9UIG4 136 aa6.83□□□□□ -1.32
SEC22B-201ENST00000578049 KRTAP10-11P60412 298 aa6.82□□□□□ -1.32
SEC22B-201ENST00000578049 A0A0G2JQZ4 141 aa6.82□□□□□ -1.32
SEC22B-201ENST00000578049 Q8N9P0 234 aaPredicted RBP6.82□□□□□ -1.32
SEC22B-201ENST00000578049 SPRR1AP35321 89 aa6.81□□□□□ -1.32
SEC22B-201ENST00000578049 EP400Q96L91 3159 aa6.81□□□□□ -1.32
SEC22B-201ENST00000578049 FP248Q71RG6 208 aaPredicted RBP6.8□□□□□ -1.32
SEC22B-201ENST00000578049 PRR26Q8N8Z3 221 aa6.8□□□□□ -1.32
SEC22B-201ENST00000578049 FLNBO75369 2602 aaKnown RBP6.8□□□□□ -1.32
SEC22B-201ENST00000578049 APLNQ9ULZ1 77 aa6.79□□□□□ -1.32
SEC22B-201ENST00000578049 SPRR1BP22528 89 aa6.78□□□□□ -1.32
SEC22B-201ENST00000578049 CR1P17927 2039 aa6.78□□□□□ -1.32
SEC22B-201ENST00000578049 KRTAP10-3P60369 221 aa6.78□□□□□ -1.32
SEC22B-201ENST00000578049 RBM12B-AS1Q9P1G2 102 aa6.76□□□□□ -1.33
SEC22B-201ENST00000578049 SRCAPQ6ZRS2 3230 aa6.76□□□□□ -1.33
SEC22B-201ENST00000578049 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
SEC22B-201ENST00000578049 CASC10Q5T4H9 136 aa6.75□□□□□ -1.33
SEC22B-201ENST00000578049 FAM229BQ4G0N7 80 aa6.74□□□□□ -1.33
SEC22B-201ENST00000578049 LINC01554Q52M75 96 aa6.74□□□□□ -1.33
SEC22B-201ENST00000578049 HRES1P13985 223 aa6.73□□□□□ -1.33
SEC22B-201ENST00000578049 KRTAP1-3Q8IUG1 177 aa6.72□□□□□ -1.33
SEC22B-201ENST00000578049 FLNAP21333 2647 aaKnown RBP6.72□□□□□ -1.33
SEC22B-201ENST00000578049 A0A1B0GU33 70 aa6.71□□□□□ -1.34
SEC22B-201ENST00000578049 CYSTM1Q9H1C7 97 aa6.71□□□□□ -1.34
SEC22B-201ENST00000578049 HECTD1Q9ULT8 2610 aa6.71□□□□□ -1.34
SEC22B-201ENST00000578049 KRTAP1-1Q07627 177 aa6.7□□□□□ -1.34
SEC22B-201ENST00000578049 Q5VV11 94 aa6.7□□□□□ -1.34
SEC22B-201ENST00000578049 ANAPC11Q9NYG5 84 aa6.7□□□□□ -1.34
SEC22B-201ENST00000578049 MAST4O15021 2626 aa6.7□□□□□ -1.34
SEC22B-201ENST00000578049 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
SEC22B-201ENST00000578049 ATRQ13535 2644 aa6.69□□□□□ -1.34
SEC22B-201ENST00000578049 Q8N1X5 172 aa6.69□□□□□ -1.34
SEC22B-201ENST00000578049 ASB16-AS1Q495Z4 193 aa6.68□□□□□ -1.34
SEC22B-201ENST00000578049 LUZP6Q538Z0 58 aa6.67□□□□□ -1.34
SEC22B-201ENST00000578049 C9orf92A6NGG3 77 aa6.66□□□□□ -1.34
SEC22B-201ENST00000578049 Q8NDZ9 215 aa6.66□□□□□ -1.34
SEC22B-201ENST00000578049 DMAC1Q96GE9 116 aa6.64□□□□□ -1.35
SEC22B-201ENST00000578049 BPTFQ12830 3046 aa6.64□□□□□ -1.35
SEC22B-201ENST00000578049 ITPR3Q14573 2671 aa6.63□□□□□ -1.35
SEC22B-201ENST00000578049 TNP2Q05952 138 aa6.63□□□□□ -1.35
SEC22B-201ENST00000578049 COX6B2Q6YFQ2 88 aa6.63□□□□□ -1.35
SEC22B-201ENST00000578049 PLAC8Q9NZF1 115 aa6.63□□□□□ -1.35
SEC22B-201ENST00000578049 ZCCHC13Q8WW36 166 aaKnown RBP6.61□□□□□ -1.35
SEC22B-201ENST00000578049 OXTP01178 125 aa6.61□□□□□ -1.35
SEC22B-201ENST00000578049 A0A0D9SG42 100 aa6.6□□□□□ -1.35
SEC22B-201ENST00000578049 Q5W150 140 aa6.58□□□□□ -1.36
SEC22B-201ENST00000578049 STAB1Q9NY15 2570 aa6.58□□□□□ -1.36
SEC22B-201ENST00000578049 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.58□□□□□ -1.36
SEC22B-201ENST00000578049 J3QL48 77 aa6.57□□□□□ -1.36
SEC22B-201ENST00000578049 KRTAP26-1Q6PEX3 210 aa6.56□□□□□ -1.36
SEC22B-201ENST00000578049 SPINK7P58062 85 aa6.55□□□□□ -1.36
SEC22B-201ENST00000578049 Q6ZR54 194 aa6.55□□□□□ -1.36
SEC22B-201ENST00000578049 HELZ2Q9BYK8 2649 aaKnown RBP6.54□□□□□ -1.36
SEC22B-201ENST00000578049 KRTAP29-1A8MX34 341 aaPredicted RBP6.53□□□□□ -1.36
SEC22B-201ENST00000578049 PRAC1Q96KF2 57 aa6.52□□□□□ -1.37
SEC22B-201ENST00000578049 KRTAP4-16G5E9R7 235 aaPredicted RBP6.51□□□□□ -1.37
SEC22B-201ENST00000578049 AKAP13Q12802 2813 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms