RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ANAPC11Q9NYG5 84 aa13.15□□□□□ -0.3
SMARCD2-206ENST00000577990 SCGB1D1O95968 90 aa13.13□□□□□ -0.31
SMARCD2-206ENST00000577990 FAM229BQ4G0N7 80 aa13.13□□□□□ -0.31
SMARCD2-206ENST00000577990 TRAV23DV6A0A075B6W5 121 aa13.12□□□□□ -0.31
SMARCD2-206ENST00000577990 B5MCH6 92 aa13.12□□□□□ -0.31
SMARCD2-206ENST00000577990 COPS9Q8WXC6 57 aa13.11□□□□□ -0.31
SMARCD2-206ENST00000577990 IFITM1P13164 125 aa13.1□□□□□ -0.31
SMARCD2-206ENST00000577990 Q6ZVH6 145 aa13.1□□□□□ -0.31
SMARCD2-206ENST00000577990 CBY1Q9Y3M2 126 aa13.1□□□□□ -0.31
SMARCD2-206ENST00000577990 OR13C6PQ8NH95 151 aa13.09□□□□□ -0.31
SMARCD2-206ENST00000577990 TYMSOSQ8TAI1 123 aa13.09□□□□□ -0.31
SMARCD2-206ENST00000577990 SMCR5Q8TEV8 140 aa13.09□□□□□ -0.31
SMARCD2-206ENST00000577990 ZNF706Q9Y5V0 76 aaPredicted RBP13.09□□□□□ -0.31
SMARCD2-206ENST00000577990 LINC00518Q8N0U6 118 aa13.08□□□□□ -0.32
SMARCD2-206ENST00000577990 SPRR4Q96PI1 79 aa13.08□□□□□ -0.32
SMARCD2-206ENST00000577990 PPDPFQ9H3Y8 114 aa13.08□□□□□ -0.32
SMARCD2-206ENST00000577990 ZNF73O43830 326 aaPredicted RBP13.07□□□□□ -0.32
SMARCD2-206ENST00000577990 KRTAP13-2Q52LG2 175 aa13.07□□□□□ -0.32
SMARCD2-206ENST00000577990 Q6ZRX8 168 aa13.07□□□□□ -0.32
SMARCD2-206ENST00000577990 RNF213Q63HN8 5207 aa13.06□□□□□ -0.32
SMARCD2-206ENST00000577990 MUSTN1Q8IVN3 82 aa13.05□□□□□ -0.32
SMARCD2-206ENST00000577990 Q9BRP9 147 aa13.03□□□□□ -0.32
SMARCD2-206ENST00000577990 JOSD1Q15040 202 aaPredicted RBP13.02□□□□□ -0.33
SMARCD2-206ENST00000577990 ERC2-IT1O76042 136 aa13.01□□□□□ -0.33
SMARCD2-206ENST00000577990 HINT1P49773 126 aaPredicted RBP13.01□□□□□ -0.33
SMARCD2-206ENST00000577990 LPAP08519 4548 aa12.99□□□□□ -0.33
SMARCD2-206ENST00000577990 C3orf22Q8N5N4 141 aa12.98□□□□□ -0.33
SMARCD2-206ENST00000577990 COX8AP10176 69 aa12.96□□□□□ -0.33
SMARCD2-206ENST00000577990 LINC00483Q53H64 154 aa12.96□□□□□ -0.33
SMARCD2-206ENST00000577990 A6NDN8 102 aa12.95□□□□□ -0.34
SMARCD2-206ENST00000577990 GAGE2AQ6NT46 116 aa12.95□□□□□ -0.34
SMARCD2-206ENST00000577990 LINC00304Q8N9R0 145 aa12.95□□□□□ -0.34
SMARCD2-206ENST00000577990 TSPAN13O95857 204 aa12.94□□□□□ -0.34
SMARCD2-206ENST00000577990 C6orf99Q4VX62 202 aa12.94□□□□□ -0.34
SMARCD2-206ENST00000577990 TRAV13-2A0A0B4J235 113 aa12.92□□□□□ -0.34
SMARCD2-206ENST00000577990 DLEU1O43261 78 aa12.92□□□□□ -0.34
SMARCD2-206ENST00000577990 SPATA45Q537H7 98 aa12.92□□□□□ -0.34
SMARCD2-206ENST00000577990 PAM16Q9Y3D7 125 aa12.92□□□□□ -0.34
SMARCD2-206ENST00000577990 COX7BP24311 80 aa12.91□□□□□ -0.34
SMARCD2-206ENST00000577990 ELOF1P60002 83 aaKnown RBP12.91□□□□□ -0.34
SMARCD2-206ENST00000577990 VAMP8Q9BV40 100 aa12.91□□□□□ -0.34
SMARCD2-206ENST00000577990 TMA7Q9Y2S6 64 aaKnown RBP12.91□□□□□ -0.34
SMARCD2-206ENST00000577990 DHRS4-AS1Q9P1J3 65 aa12.9□□□□□ -0.34
SMARCD2-206ENST00000577990 TRBV7-6A0A0J9YX20 115 aa12.88□□□□□ -0.35
SMARCD2-206ENST00000577990 A4D1N5 150 aa12.88□□□□□ -0.35
SMARCD2-206ENST00000577990 C14orf144Q96I85 54 aa12.88□□□□□ -0.35
SMARCD2-206ENST00000577990 ST20-AS1Q8NBB2 130 aa12.87□□□□□ -0.35
SMARCD2-206ENST00000577990 HIST1H4GQ99525 98 aa12.87□□□□□ -0.35
SMARCD2-206ENST00000577990 A0A1B0GWB2 263 aa12.85□□□□□ -0.35
SMARCD2-206ENST00000577990 PRR4Q16378 134 aa12.84□□□□□ -0.35
SMARCD2-206ENST00000577990 SMIM11BQ8TCY0 68 aa12.84□□□□□ -0.35
SMARCD2-206ENST00000577990 IGLV9-49A0A0B4J1Y8 123 aa12.83□□□□□ -0.36
SMARCD2-206ENST00000577990 CTAG1AP78358 180 aa12.83□□□□□ -0.36
SMARCD2-206ENST00000577990 SLC25A34Q6PIV7 304 aa12.83□□□□□ -0.36
SMARCD2-206ENST00000577990 Q8NBF4 154 aa12.83□□□□□ -0.36
SMARCD2-206ENST00000577990 MOBPQ13875 183 aa12.82□□□□□ -0.36
SMARCD2-206ENST00000577990 PYY3Q5JQD4 70 aa12.82□□□□□ -0.36
SMARCD2-206ENST00000577990 SPAG11AQ6PDA7 123 aa12.82□□□□□ -0.36
SMARCD2-206ENST00000577990 HIGD1BQ9P298 99 aa12.82□□□□□ -0.36
SMARCD2-206ENST00000577990 SPRR1BP22528 89 aa12.79□□□□□ -0.36
SMARCD2-206ENST00000577990 C4orf48Q5BLP8 95 aa12.79□□□□□ -0.36
SMARCD2-206ENST00000577990 SSBP3-AS1Q7Z2R9 100 aa12.78□□□□□ -0.36
SMARCD2-206ENST00000577990 C12orf57Q99622 126 aa12.78□□□□□ -0.36
SMARCD2-206ENST00000577990 C2orf91Q6ZV80 131 aa12.77□□□□□ -0.37
SMARCD2-206ENST00000577990 C9orf153Q5TBE3 101 aa12.76□□□□□ -0.37
SMARCD2-206ENST00000577990 VAMP3Q15836 100 aa12.74□□□□□ -0.37
SMARCD2-206ENST00000577990 RETNLBQ9BQ08 111 aa12.74□□□□□ -0.37
SMARCD2-206ENST00000577990 NHP2Q9NX24 153 aaKnown RBP12.74□□□□□ -0.37
SMARCD2-206ENST00000577990 TAL2Q16559 108 aa12.73□□□□□ -0.37
SMARCD2-206ENST00000577990 DEFB105AQ8NG35 78 aa12.72□□□□□ -0.37
SMARCD2-206ENST00000577990 LAMTOR3Q9UHA4 124 aa12.72□□□□□ -0.37
SMARCD2-206ENST00000577990 TEX49A0A1B0GTD5 131 aa12.71□□□□□ -0.37
SMARCD2-206ENST00000577990 SPINK1P00995 79 aa12.71□□□□□ -0.37
SMARCD2-206ENST00000577990 SLC25A20O43772 301 aa12.69□□□□□ -0.38
SMARCD2-206ENST00000577990 CFC1BP0CG36 223 aa12.69□□□□□ -0.38
SMARCD2-206ENST00000577990 CFC1P0CG37 223 aa12.69□□□□□ -0.38
SMARCD2-206ENST00000577990 IGLV5-48A0A075B6I7 105 aa12.68□□□□□ -0.38
SMARCD2-206ENST00000577990 CEND1Q8N111 149 aa12.68□□□□□ -0.38
SMARCD2-206ENST00000577990 RAB37Q96AX2 223 aa12.68□□□□□ -0.38
SMARCD2-206ENST00000577990 LINC01547P58512 204 aaPredicted RBP12.67□□□□□ -0.38
SMARCD2-206ENST00000577990 LINC00575Q6W349 94 aa12.67□□□□□ -0.38
SMARCD2-206ENST00000577990 A0A0B4J2C4 111 aa12.66□□□□□ -0.38
SMARCD2-206ENST00000577990 Q1RN00 199 aa12.66□□□□□ -0.38
SMARCD2-206ENST00000577990 RPS29P62273 56 aaKnown RBP12.65□□□□□ -0.38
SMARCD2-206ENST00000577990 H7C2G1 150 aa12.64□□□□□ -0.39
SMARCD2-206ENST00000577990 BVES-AS1Q5T3Y7 98 aa12.64□□□□□ -0.39
SMARCD2-206ENST00000577990 TMEM238LA0A1B0GVL6 79 aa12.63□□□□□ -0.39
SMARCD2-206ENST00000577990 A6NJY4 79 aa12.63□□□□□ -0.39
SMARCD2-206ENST00000577990 SMIM29Q86T20 159 aa12.63□□□□□ -0.39
SMARCD2-206ENST00000577990 hADV29S1A0JD25 119 aa12.62□□□□□ -0.39
SMARCD2-206ENST00000577990 IGLV7-46A0A075B6I9 117 aa12.61□□□□□ -0.39
SMARCD2-206ENST00000577990 FXYD2P54710 66 aa12.61□□□□□ -0.39
SMARCD2-206ENST00000577990 Q8N377 158 aa12.6□□□□□ -0.39
SMARCD2-206ENST00000577990 HSD52Q0P140 79 aa12.59□□□□□ -0.39
SMARCD2-206ENST00000577990 FP248Q71RG6 208 aaPredicted RBP12.59□□□□□ -0.39
SMARCD2-206ENST00000577990 UQCR10Q9UDW1 63 aa12.59□□□□□ -0.39
SMARCD2-206ENST00000577990 MUC2Q02817 5179 aa12.58□□□□□ -0.4
SMARCD2-206ENST00000577990 Q6ZQY7 126 aa12.58□□□□□ -0.4
SMARCD2-206ENST00000577990 PRO1933Q9H354 126 aa12.57□□□□□ -0.4
SMARCD2-206ENST00000577990 PRO1854Q9UHT4 67 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms