RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 C11orf45Q8TAV5 145 aa9.71□□□□□ -0.86
SCARF1-209ENST00000576012 CAMK2N2Q96S95 79 aa9.71□□□□□ -0.86
SCARF1-209ENST00000576012 CMC4P56277 68 aaPredicted RBP9.7□□□□□ -0.86
SCARF1-209ENST00000576012 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
SCARF1-209ENST00000576012 EPM2AB3EWF7 344 aa9.69□□□□□ -0.86
SCARF1-209ENST00000576012 STAB1Q9NY15 2570 aa9.69□□□□□ -0.86
SCARF1-209ENST00000576012 PDE6GP18545 87 aa9.68□□□□□ -0.86
SCARF1-209ENST00000576012 MAST4O15021 2626 aa9.68□□□□□ -0.86
SCARF1-209ENST00000576012 PRYO14603 147 aa9.68□□□□□ -0.86
SCARF1-209ENST00000576012 NBEAL1Q6ZS30 2694 aa9.68□□□□□ -0.86
SCARF1-209ENST00000576012 H3BS24 57 aa9.67□□□□□ -0.86
SCARF1-209ENST00000576012 C9orf66Q5T8R8 295 aa9.67□□□□□ -0.86
SCARF1-209ENST00000576012 IGKV4-1P06312 121 aa9.67□□□□□ -0.86
SCARF1-209ENST00000576012 NSD1Q96L73 2696 aaPredicted RBP9.67□□□□□ -0.86
SCARF1-209ENST00000576012 FBN1P35555 2871 aaKnown RBP9.66□□□□□ -0.86
SCARF1-209ENST00000576012 SMIM29Q86T20 159 aa9.65□□□□□ -0.86
SCARF1-209ENST00000576012 ELOF1P60002 83 aaKnown RBP9.65□□□□□ -0.87
SCARF1-209ENST00000576012 A0A0J9YWU9 116 aa9.64□□□□□ -0.87
SCARF1-209ENST00000576012 IGHV4-30-4P0DP06 118 aa9.64□□□□□ -0.87
SCARF1-209ENST00000576012 Q6ZRU5 148 aa9.64□□□□□ -0.87
SCARF1-209ENST00000576012 NDUFC1O43677 76 aa9.64□□□□□ -0.87
SCARF1-209ENST00000576012 A0A0G2JQZ4 141 aa9.63□□□□□ -0.87
SCARF1-209ENST00000576012 A0A1W2PNN7 141 aa9.63□□□□□ -0.87
SCARF1-209ENST00000576012 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
SCARF1-209ENST00000576012 PSPHP1O15172 72 aa9.63□□□□□ -0.87
SCARF1-209ENST00000576012 BCE1O60756 84 aa9.62□□□□□ -0.87
SCARF1-209ENST00000576012 LINC00612Q8N6U2 182 aa9.62□□□□□ -0.87
SCARF1-209ENST00000576012 DEFB116Q30KQ4 102 aa9.62□□□□□ -0.87
SCARF1-209ENST00000576012 WFDC10BQ8IUB3 73 aa9.62□□□□□ -0.87
SCARF1-209ENST00000576012 VPREB1P12018 145 aa9.61□□□□□ -0.87
SCARF1-209ENST00000576012 ESRGQ1W209 222 aa9.61□□□□□ -0.87
SCARF1-209ENST00000576012 OCR1Q9BZK8 76 aa9.6□□□□□ -0.87
SCARF1-209ENST00000576012 KRTAP1-1Q07627 177 aa9.6□□□□□ -0.87
SCARF1-209ENST00000576012 OXLD1Q5BKU9 147 aa9.59□□□□□ -0.87
SCARF1-209ENST00000576012 KRTAP10-3P60369 221 aa9.58□□□□□ -0.88
SCARF1-209ENST00000576012 LELP1Q5T871 98 aa9.58□□□□□ -0.88
SCARF1-209ENST00000576012 LYRM9A8MSI8 78 aa9.58□□□□□ -0.88
SCARF1-209ENST00000576012 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
SCARF1-209ENST00000576012 ANK3Q12955 4377 aaKnown RBP9.58□□□□□ -0.88
SCARF1-209ENST00000576012 M0R378 163 aa9.57□□□□□ -0.88
SCARF1-209ENST00000576012 Q6ZRP5 223 aa9.57□□□□□ -0.88
SCARF1-209ENST00000576012 IGKV2D-24A0A075B6R9 120 aa9.57□□□□□ -0.88
SCARF1-209ENST00000576012 ST20-AS1Q8NBB2 130 aa9.57□□□□□ -0.88
SCARF1-209ENST00000576012 Q6ZTC4 211 aa9.56□□□□□ -0.88
SCARF1-209ENST00000576012 NKAPP1Q8N9T2 125 aa9.56□□□□□ -0.88
SCARF1-209ENST00000576012 INAFM1C9JVW0 142 aa9.55□□□□□ -0.88
SCARF1-209ENST00000576012 KPRPQ5T749 579 aaPredicted RBP9.54□□□□□ -0.88
SCARF1-209ENST00000576012 Q8N377 158 aa9.54□□□□□ -0.88
SCARF1-209ENST00000576012 COL6A5A8TX70 2615 aa9.54□□□□□ -0.88
SCARF1-209ENST00000576012 APOC4P55056 127 aa9.54□□□□□ -0.88
SCARF1-209ENST00000576012 SPART-AS1P0CW21 52 aa9.53□□□□□ -0.88
SCARF1-209ENST00000576012 ATP5EP56381 51 aaPredicted RBP9.53□□□□□ -0.88
SCARF1-209ENST00000576012 SERTAD4-AS1Q5TG53 156 aa9.53□□□□□ -0.88
SCARF1-209ENST00000576012 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
SCARF1-209ENST00000576012 RBM12B-AS1Q9P1G2 102 aa9.53□□□□□ -0.88
SCARF1-209ENST00000576012 PRR34Q9NV39 138 aa9.53□□□□□ -0.88
SCARF1-209ENST00000576012 TENM3Q9P273 2699 aa9.52□□□□□ -0.89
SCARF1-209ENST00000576012 FAM168BA1KXE4 195 aa9.52□□□□□ -0.89
SCARF1-209ENST00000576012 C1orf64Q8NEQ6 169 aa9.52□□□□□ -0.89
SCARF1-209ENST00000576012 K7EQZ3 153 aa9.5□□□□□ -0.89
SCARF1-209ENST00000576012 WFDC13Q8IUB5 93 aa9.5□□□□□ -0.89
SCARF1-209ENST00000576012 A0A1W2PNM2 257 aa9.5□□□□□ -0.89
SCARF1-209ENST00000576012 H3BQ85 93 aa9.5□□□□□ -0.89
SCARF1-209ENST00000576012 C1orf137Q5JT78 98 aa9.5□□□□□ -0.89
SCARF1-209ENST00000576012 Q8NAQ8 132 aa9.5□□□□□ -0.89
SCARF1-209ENST00000576012 C7orf33Q8WU49 177 aa9.49□□□□□ -0.89
SCARF1-209ENST00000576012 GVQW2A0A096LPI5 108 aaPredicted RBP9.48□□□□□ -0.89
SCARF1-209ENST00000576012 EGFEM1PQ0D2K5 195 aa9.48□□□□□ -0.89
SCARF1-209ENST00000576012 C15orf56Q8N910 161 aa9.48□□□□□ -0.89
SCARF1-209ENST00000576012 A8MU10 97 aa9.48□□□□□ -0.89
SCARF1-209ENST00000576012 MGAM2Q2M2H8 2515 aa9.46□□□□□ -0.89
SCARF1-209ENST00000576012 UBE2BP63146 152 aa9.46□□□□□ -0.9
SCARF1-209ENST00000576012 ETDCA0A1B0GVM5 59 aa9.45□□□□□ -0.9
SCARF1-209ENST00000576012 hDV103S1A0JD37 113 aa9.45□□□□□ -0.9
SCARF1-209ENST00000576012 ERC2-IT1O76042 136 aa9.45□□□□□ -0.9
SCARF1-209ENST00000576012 SYCNQ0VAF6 134 aa9.45□□□□□ -0.9
SCARF1-209ENST00000576012 SRRM2Q9UQ35 2752 aaKnown RBP9.45□□□□□ -0.9
SCARF1-209ENST00000576012 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.44□□□□□ -0.9
SCARF1-209ENST00000576012 Q9BRP9 147 aa9.43□□□□□ -0.9
SCARF1-209ENST00000576012 RPL37AP61513 92 aaKnown RBP9.42□□□□□ -0.9
SCARF1-209ENST00000576012 A8MUN3 132 aa9.42□□□□□ -0.9
SCARF1-209ENST00000576012 DSCR10P59022 87 aa9.42□□□□□ -0.9
SCARF1-209ENST00000576012 CSMD3Q7Z407 3707 aa9.4□□□□□ -0.9
SCARF1-209ENST00000576012 TRAV22A0A0B4J277 110 aa9.4□□□□□ -0.9
SCARF1-209ENST00000576012 LINC00208Q96KT6 92 aa9.39□□□□□ -0.91
SCARF1-209ENST00000576012 CASC10Q5T4H9 136 aa9.38□□□□□ -0.91
SCARF1-209ENST00000576012 A0A096LNI7 61 aa9.37□□□□□ -0.91
SCARF1-209ENST00000576012 KRTAP26-1Q6PEX3 210 aa9.37□□□□□ -0.91
SCARF1-209ENST00000576012 Q8NBF4 154 aa9.37□□□□□ -0.91
SCARF1-209ENST00000576012 IGLV5-48A0A075B6I7 105 aa9.37□□□□□ -0.91
SCARF1-209ENST00000576012 Q6ZRX8 168 aa9.37□□□□□ -0.91
SCARF1-209ENST00000576012 PSCAO43653 123 aa9.36□□□□□ -0.91
SCARF1-209ENST00000576012 KCNQ1DNQ9H478 68 aa9.36□□□□□ -0.91
SCARF1-209ENST00000576012 A0A087WSZ3 146 aa9.34□□□□□ -0.91
SCARF1-209ENST00000576012 HCG22E2RYF7 251 aa9.34□□□□□ -0.91
SCARF1-209ENST00000576012 KTN1-AS1Q86SY8 53 aa9.34□□□□□ -0.91
SCARF1-209ENST00000576012 SPTSSBQ8NFR3 76 aa9.34□□□□□ -0.91
SCARF1-209ENST00000576012 C8orf87E5RJ46 101 aa9.34□□□□□ -0.91
SCARF1-209ENST00000576012 PRR26Q8N8Z3 221 aa9.34□□□□□ -0.91
SCARF1-209ENST00000576012 PRLHP81277 87 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms